MeSH Review:
Computational Biology
Wise,
Foord,
Fraser,
Barnes,
Elshourbagy,
Eilert,
Ignar,
Murdock,
Steplewski,
Green,
Brown,
Dowell,
Szekeres,
Hassall,
Marshall,
Wilson,
Pike,
Petricoin,
Ornstein,
Paweletz,
Ardekani,
Hackett,
Hitt,
Velassco,
Trucco,
Wiegand,
Wood,
Simone,
Levine,
Linehan,
Emmert-Buck,
Steinberg,
Kohn,
Liotta,
Chen,
Zhang,
McDonald,
Davidoff,
Bailey,
Bai,
Liu,
Caskey,
Buturović,
Beukers,
Kristiansen,
IJzerman,
Edvardsen,
Siezen,
van Enckevort,
Kleerebezem,
Teusink,
Adelson,
Cam,
DeSilva,
Franklin,
Rossi,
Zlotnik,
Jaworski,
Moreira,
Li,
Lee,
Rodriguez,
Gottlieb,
Beitel,
Lumbroso,
Pinsky,
Trifiro,
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- Serum proteomic patterns for detection of prostate cancer. Petricoin, E.F., Ornstein, D.K., Paweletz, C.P., Ardekani, A., Hackett, P.S., Hitt, B.A., Velassco, A., Trucco, C., Wiegand, L., Wood, K., Simone, C.B., Levine, P.J., Linehan, W.M., Emmert-Buck, M.R., Steinberg, S.M., Kohn, E.C., Liotta, L.A. J. Natl. Cancer Inst. (2002)
- Identification of Down's syndrome critical locus gene SIM2-s as a drug therapy target for solid tumors. DeYoung, M.P., Tress, M., Narayanan, R. Proc. Natl. Acad. Sci. U.S.A. (2003)
- Ubiquitin-mediated sequestration of normal cellular proteins into polyglutamine aggregates. Donaldson, K.M., Li, W., Ching, K.A., Batalov, S., Tsai, C.C., Joazeiro, C.A. Proc. Natl. Acad. Sci. U.S.A. (2003)
- Somatically mutated regions of immunoglobulin on human B-cell lymphomas code for peptides that bind to autologous major histocompatibility complex class I, providing a potential target for cytotoxic T cells. Gricks, C.S., Rawlings, E., Foroni, L., Madrigal, J.A., Amlot, P.L. Cancer Res. (2001)
- The biology of chemokines and their receptors. Rossi, D., Zlotnik, A. Annu. Rev. Immunol. (2000)
- PTEN and myotubularin phosphoinositide phosphatases: bringing bioinformatics to the lab bench. Wishart, M.J., Taylor, G.S., Slama, J.T., Dixon, J.E. Curr. Opin. Cell Biol. (2001)
- Hfq-dependent regulation of OmpA synthesis is mediated by an antisense RNA. Udekwu, K.I., Darfeuille, F., Vogel, J., Reimegård, J., Holmqvist, E., Wagner, E.G. Genes Dev. (2005)
- TinyGRAP database: a bioinformatics tool to mine G-protein-coupled receptor mutant data. Beukers, M.W., Kristiansen, I., IJzerman, A.P., Edvardsen, I. Trends Pharmacol. Sci. (1999)
- Molecular cloning and characterization of Mustang, a novel nuclear protein expressed during skeletal development and regeneration. Lombardo, F., Komatsu, D., Hadjiargyrou, M. FASEB J. (2004)
- Comparative genomics and gene expression analysis identifies BBS9, a new Bardet-Biedl syndrome gene. Nishimura, D.Y., Swiderski, R.E., Searby, C.C., Berg, E.M., Ferguson, A.L., Hennekam, R., Merin, S., Weleber, R.G., Biesecker, L.G., Stone, E.M., Sheffield, V.C. Am. J. Hum. Genet. (2005)
- CYP83b1 is the oxime-metabolizing enzyme in the glucosinolate pathway in Arabidopsis. Hansen, C.H., Du, L., Naur, P., Olsen, C.E., Axelsen, K.B., Hick, A.J., Pickett, J.A., Halkier, B.A. J. Biol. Chem. (2001)
- Huntingtin interacting protein 1 induces apoptosis via a novel caspase-dependent death effector domain. Hackam, A.S., Yassa, A.S., Singaraja, R., Metzler, M., Gutekunst, C.A., Gan, L., Warby, S., Wellington, C.L., Vaillancourt, J., Chen, N., Gervais, F.G., Raymond, L., Nicholson, D.W., Hayden, M.R. J. Biol. Chem. (2000)
- Genome data mining of lactic acid bacteria: the impact of bioinformatics. Siezen, R.J., van Enckevort, F.H., Kleerebezem, M., Teusink, B. Curr. Opin. Biotechnol. (2004)
- The NEIBank project for ocular genomics: data-mining gene expression in human and rodent eye tissues. Wistow, G. Progress in retinal and eye research. (2006)
- T-cell epitopes within the complementarity-determining and framework regions of the tumor-derived immunoglobulin heavy chain in multiple myeloma. Hansson, L., Rabbani, H., Fagerberg, J., Osterborg, A., Mellstedt, H. Blood (2003)
- MAPPP: MHC class I antigenic peptide processing prediction. Hakenberg, J., Nussbaum, A.K., Schild, H., Rammensee, H.G., Kuttler, C., Holzhütter, H.G., Kloetzel, P.M., Kaufmann, S.H., Mollenkopf, H.J. Appl. Bioinformatics (2003)
- Bcr-Abl kinase modulates the translation regulators ribosomal protein S6 and 4E-BP1 in chronic myelogenous leukemia cells via the mammalian target of rapamycin. Ly, C., Arechiga, A.F., Melo, J.V., Walsh, C.M., Ong, S.T. Cancer Res. (2003)
- Splicing factor hSlu7 contains a unique functional domain required to retain the protein within the nucleus. Shomron, N., Reznik, M., Ast, G. Mol. Biol. Cell (2004)
- Molecular identification of high and low affinity receptors for nicotinic acid. Wise, A., Foord, S.M., Fraser, N.J., Barnes, A.A., Elshourbagy, N., Eilert, M., Ignar, D.M., Murdock, P.R., Steplewski, K., Green, A., Brown, A.J., Dowell, S.J., Szekeres, P.G., Hassall, D.G., Marshall, F.H., Wilson, S., Pike, N.B. J. Biol. Chem. (2003)
- A novel PAAD-containing protein that modulates NF-kappa B induction by cytokines tumor necrosis factor-alpha and interleukin-1beta. Fiorentino, L., Stehlik, C., Oliveira, V., Ariza, M.E., Godzik, A., Reed, J.C. J. Biol. Chem. (2002)
- Update of the androgen receptor gene mutations database. Gottlieb, B., Beitel, L.K., Lumbroso, R., Pinsky, L., Trifiro, M. Hum. Mutat. (1999)
- Elucidation of ataxin-3 and ataxin-7 function by integrative bioinformatics. Scheel, H., Tomiuk, S., Hofmann, K. Hum. Mol. Genet. (2003)
- A bioinformatics-based strategy identifies c-Myc and Cdc25A as candidates for the Apmt mammary tumor latency modifiers. Cozma, D., Lukes, L., Rouse, J., Qiu, T.H., Liu, E.T., Hunter, K.W. Genome Res. (2002)
- The Trypanosoma brucei signal recognition particle lacks the Alu-domain-binding proteins: purification and functional analysis of its binding proteins by RNAi. Lustig, Y., Goldshmidt, H., Uliel, S., Michaeli, S. J. Cell. Sci. (2005)
- NopA is associated with cell surface appendages produced by the type III secretion system of Rhizobium sp. strain NGR234. Deakin, W.J., Marie, C., Saad, M.M., Krishnan, H.B., Broughton, W.J. Mol. Plant Microbe Interact. (2005)
- A family of 12 human genes containing oxysterol-binding domains. Jaworski, C.J., Moreira, E., Li, A., Lee, R., Rodriguez, I.R. Genomics (2001)
- Shear-induced cyclooxygenase-2 via a JNK2/c-Jun-dependent pathway regulates prostaglandin receptor expression in chondrocytic cells. Abulencia, J.P., Gaspard, R., Healy, Z.R., Gaarde, W.A., Quackenbush, J., Konstantopoulos, K. J. Biol. Chem. (2003)
- Identification of two hERR2-related novel nuclear receptors utilizing bioinformatics and inverse PCR. Chen, F., Zhang, Q., McDonald, T., Davidoff, M.J., Bailey, W., Bai, C., Liu, Q., Caskey, C.T. Gene (1999)
- PCP: a program for supervised classification of gene expression profiles. Buturović, L.J. Bioinformatics (2006)
- Gene expression in sheep skin and wool (hair). Adelson, D.L., Cam, G.R., DeSilva, U., Franklin, I.R. Genomics (2004)
- Identification and characterization of a lymphocytic Rho-GTPase effector: rhotekin-2. Collier, F.M., Gregorio-King, C.C., Gough, T.J., Talbot, C.D., Walder, K., Kirkland, M.A. Biochem. Biophys. Res. Commun. (2004)