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Chemical Compound Review

D-ribose     (2S,3S,4R)-2,3,4,5- tetrahydroxypentanal

Synonyms: Lyxose, D-Lyxose, dl-Lyxose, D-Lyx, lyxo-pentose, ...
 
 
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Disease relevance of dl-Lyxose

 

High impact information on dl-Lyxose

  • Glucokinase exhibited an ATPase activity which was 1/2000th that of the rate of the kinase reaction, and unlike yeast hexokinase, it was not affected by the addition of lyxose [5].
  • This glucose-induced conformational state had an increased ability to bind metal-ATP ligands; however, the relative changes in the dissociation constants for the various metal-ATP ligands differ from those observed with hexokinase in the presence of lyxose [6].
  • Adaptation of yeast torulopsis candida to D-arabinose, D-lyxose and L-oxylose is shown to be due to the appearance of a new enzyme which catalyzes the reduction of these pentoses to D-arabitol and xylitol, respectively [7].
  • Acid hydrolysis afforded D-lyxose [8].
  • The purified enzyme had an optimum pH at 8.0, an optimum temperature at 60 degrees C, a pI of 5.2 and a Km of 20 mM, and specifically converted D-mannose and D-lyxose to ketose [9].
 

Associations of dl-Lyxose with other chemical compounds

 

Gene context of dl-Lyxose

  • The binding of five-carbon sugar inhibitors such as lyxose induced a conformational state of hexokinase that demonstrated a small quenching of 2,6-TNS fluorescence but an increased ability to bind metal-ligands when compared to free enzyme [6].
  • A second-stage mutant of Escherichia coli K12 designated as strain 806 grew faster on D-lyxose than the mutant strain 805 previously described [11].
 

Analytical, diagnostic and therapeutic context of dl-Lyxose

References

  1. Chemistry of the lyxose-containing mycobacteriophage receptors of Mycobacterium phlei/Mycobacterium smegmatis. Khoo, K.H., Suzuki, R., Dell, A., Morris, H.R., McNeil, M.R., Brennan, P.J., Besra, G.S. Biochemistry (1996) [Pubmed]
  2. D-Lyxose as a substrate for Streptomyces D-xylose isomerase. Parker, J.H. Appl. Environ. Microbiol. (1978) [Pubmed]
  3. Growth on D-lyxose of a mutant strain of Escherichia coli K12 using a novel isomerase and enzymes related to D-xylase metabolism. Stevens, F.J., Wu, T.T. J. Gen. Microbiol. (1976) [Pubmed]
  4. Production of L-erythrose via L-erythrulose from erythritol using microbial and enzymatic reactions. Mizanur, R.M., Takeshita, K., Moshino, H., Takada, G., Izumori, K. J. Biosci. Bioeng. (2001) [Pubmed]
  5. Sugar specificity of human beta-cell glucokinase: correlation of molecular models with kinetic measurements. Xu, L.Z., Weber, I.T., Harrison, R.W., Gidh-Jain, M., Pilkis, S.J. Biochemistry (1995) [Pubmed]
  6. 6-(p-toluidinyl)naphthalene-2-sulfonic acid as a fluorescent probe of yeast hexokinase: conformational states induced by sugar and nucleotide ligands. Ohning, G.V., Neet, K.E. Biochemistry (1983) [Pubmed]
  7. The utilization of rare and unnatural pentoses by yeast Torulopsis candida. Karassevitch, N.Y. Biochimie (1976) [Pubmed]
  8. Enantiomeric forms of 9-(5-deoxy-beta-erythro-pent-4-enofuranosyl)adenine and a new preparation of 5-deoxy-D-lyxose. Lerner, L.M. Carbohydr. Res. (1977) [Pubmed]
  9. Purification and characterization of mannose isomerase from Agrobacterium radiobacter M-1. Hirose, J., Maeda, K., Yokoi, H., Takasaki, Y. Biosci. Biotechnol. Biochem. (2001) [Pubmed]
  10. Studies on the active site of yeast hexokinase. Specific phosphorylation of a serine residue induced by D-xylose and ATPMg. Menezes, L.C., Pudles, J. Eur. J. Biochem. (1976) [Pubmed]
  11. Some properties of D-mannose isomerase from Escherichia coli K12. Stevens, F.J., Stevens, P.W., Hovis, J.G., Wu, T.T. J. Gen. Microbiol. (1981) [Pubmed]
  12. Production of D-lyxose from D-glucose by microbial and enzymatic reactions. Ahmed, Z., Sasahara, H., Bhuiyan, S.H., Saiki, T., Shimonishi, T., Takada, G., Izumori, K. J. Biosci. Bioeng. (1999) [Pubmed]
 
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