The world's first wiki where authorship really matters (Nature Genetics, 2008). Due credit and reputation for authors. Imagine a global collaborative knowledge base for original thoughts. Search thousands of articles and collaborate with scientists around the globe.

wikigene or wiki gene protein drug chemical gene disease author authorship tracking collaborative publishing evolutionary knowledge reputation system wiki2.0 global collaboration genes proteins drugs chemicals diseases compound
Hoffmann, R. A wiki for the life sciences where authorship matters. Nature Genetics (2008)
 

Links

 

Gene Review

Zeb1  -  zinc finger E-box binding homeobox 1

Rattus norvegicus

Synonyms: TCF-8, Tcf8, Transcription factor 8, Zfhep, Zfhx1a, ...
 
 
Welcome! If you are familiar with the subject of this article, you can contribute to this open access knowledge base by deleting incorrect information, restructuring or completely rewriting any text. Read more.
 

Disease relevance of Tcf8

  • It thus appears deltaEF1 mediates SMC differentiation via interaction with SRF and Smad3 during development and in vascular disease [1].
  • Two Zfhep antisense oligonucleotides repressed proliferation of either U-138 or U-343 glioblastoma cells more than control oligonucleotides [2].
 

High impact information on Tcf8

  • In contrast, this element was repressed by the binding of the zinc-finger protein deltaEF1/ZEB1 [3].
  • We propose a model of regulation where the activating transcription factor Nkx2.5 and the repressor deltaEF1/ZEB1 compete for an overlapping DNA binding site [3].
  • The transcription factor deltaEF1 is inversely expressed with type II collagen mRNA and can repress Col2a1 promoter activity in transfected chondrocytes [4].
  • Overexpression of deltaEF1 in differentiated chondrocytes resulted in decreased expression of a reporter construct containing a collagen II promoter/enhancer insert; however, this negative regulation was not dependent on the proximal E2 box [4].
  • Chick limb bud mesenchymal cells, which do not express type II collagen, expressed abundant deltaEF1 mRNA, but, following differentiation in micromass culture, deltaEF1 mRNA expression was lost [4].
 

Biological context of Tcf8

  • Coexpression of the wtS-(-306-OCluc) fusion gene with deltaEF1 decreased luciferase activity 30% relative to cotransfection with empty vector [5].
  • Repression was abolished by point mutations in the putative deltaEF1 motifs, mS-(-306-OCluc) [5].
  • To assess if overexpression of deltaEF1 augments transcriptional repression by these sequences, the intron 1 sequences (wtS) were placed upstream to the native rat osteocalcin promoter fused to a luciferase reporter gene (-306-OCluc) [5].
  • The consensus sequence for the transcription factor deltaEF1 is homologous to two pyrimidine-rich repeats in intron 1 that contribute to silencing of osteocalcin-reporter fusion genes [5].
  • To determine whether deltaEF1 binds to these DNA sequences, gel retardation assays were performed using oligonucleotides containing the putative osteocalcin deltaEF1 motifs and a classical deltaEF1 motif, as radiolabeled probes [5].
 

Anatomical context of Tcf8

  • Primary embryonic chick sternal chondrocytes, which express abundant type II collagen, displayed minimal levels of deltaEF1 mRNA [4].
  • We examined expression of Zfhep in the rat forebrain during embryonic and postnatal development [2].
  • Interactions of non-receptor transcription factors (such as Zfhep) with certain TREs are important to modify gene-specific regulation by thyroid hormones [6].
  • Expression of Zfhep in the ventricular zone decreases during late development as the population of progenitor cells decreases [2].
  • We investigated a possible link between Zfhep and proliferation by treating human glial cell lines with Zfhep antisense phosphorothioate oligodeoxynucleotides [2].
 

Associations of Tcf8 with chemical compounds

 

Regulatory relationships of Tcf8

 

Other interactions of Tcf8

 

Analytical, diagnostic and therapeutic context of Tcf8

References

  1. DeltaEF1 mediates TGF-beta signaling in vascular smooth muscle cell differentiation. Nishimura, G., Manabe, I., Tsushima, K., Fujiu, K., Oishi, Y., Imai, Y., Maemura, K., Miyagishi, M., Higashi, Y., Kondoh, H., Nagai, R. Dev. Cell (2006) [Pubmed]
  2. Developmental and functional evidence of a role for Zfhep in neural cell development. Yen, G., Croci, A., Dowling, A., Zhang, S., Zoeller, R.T., Darling, D.S. Brain Res. Mol. Brain Res. (2001) [Pubmed]
  3. Regulation of collagen type I in vascular smooth muscle cells by competition between Nkx2.5 and deltaEF1/ZEB1. Ponticos, M., Partridge, T., Black, C.M., Abraham, D.J., Bou-Gharios, G. Mol. Cell. Biol. (2004) [Pubmed]
  4. The transcription factor deltaEF1 is inversely expressed with type II collagen mRNA and can repress Col2a1 promoter activity in transfected chondrocytes. Murray, D., Precht, P., Balakir, R., Horton, W.E. J. Biol. Chem. (2000) [Pubmed]
  5. Transcriptional repression of the rat osteocalcin gene by deltaEF1. Sooy, K., Demay, M.B. Endocrinology (2002) [Pubmed]
  6. A zinc finger homeodomain transcription factor binds specific thyroid hormone response elements. Darling, D.S., Gaur, N.K., Zhu, B. Mol. Cell. Endocrinol. (1998) [Pubmed]
  7. Bacterial lipopolysaccharide stimulates the thyrotropin-dependent thyroglobulin gene expression at the transcriptional level by involving the transcription factors thyroid transcription factor-1 and paired box domain transcription factor 8. Vélez, M.L., Costamagna, E., Kimura, E.T., Fozzatti, L., Pellizas, C.G., Montesinos, M.M., Lucero, A.M., Coleoni, A.H., Santisteban, P., Masini-Repiso, A.M. Endocrinology (2006) [Pubmed]
  8. Rebamipide, a gastro-protective drug, inhibits indomethacin-induced apoptosis in cultured rat gastric mucosal cells: association with the inhibition of growth arrest and DNA damage-induced 45 alpha expression. Naito, Y., Kajikawa, H., Mizushima, K., Shimozawa, M., Kuroda, M., Katada, K., Takagi, T., Handa, O., Kokura, S., Ichikawa, H., Yoshida, N., Matsui, H., Yoshikawa, T. Dig. Dis. Sci. (2005) [Pubmed]
  9. Identification of a zinc finger homoeodomain enhancer protein after AT(2) receptor stimulation by differential mRNA display. Stoll, M., Hahn, A.W., Jonas, U., Zhao, Y., Schieffer, B., Fischer, J.W., Unger, T. Arterioscler. Thromb. Vasc. Biol. (2002) [Pubmed]
  10. The CRE-like element inside the 5'-upstream region of the rat sodium/iodide symporter gene interacts with diverse classes of b-Zip molecules that regulate transcriptional activities through strong synergy with Pax-8. Chun, J.T., Di Dato, V., D'Andrea, B., Zannini, M., Di Lauro, R. Mol. Endocrinol. (2004) [Pubmed]
 
WikiGenes - Universities