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Gene Review

SNORD14A  -  small nucleolar RNA, C/D box 14A

Homo sapiens

Synonyms: RNU14, RNU14A, U14, U14-S13-5
 
 
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Disease relevance of SNORD14A

  • Human herpesvirus 7 (HHV-7) infection in histologically normal human tissues was investigated by immunohistochemical detection of the 85-kDa tegument phosphoprotein (pp85) encoded by the U14 gene [1].
  • The backbone torsion angles, which partially influence the local conformation of U12 and U14 in U1 and U3-hairpins, respectively, are probably locked in the trans conformation as in the case of U13 in the U2-hairpin [2].
  • The aim of present study is to determine whether the combined administration of hyaluronic acid (HA) with paclitaxel can produce additional or synergistic therapeutic effects in the control of Lewis lung carcinoma (LLC) migration and ascites formation of U14 cervical tumor [3].
 

High impact information on SNORD14A

  • Consistent with this, U14 snoRNAs can be processed from both non-intronic and intronic transcripts in tobacco protoplasts such that processing is splicing independent [4].
  • Point mutations in ATPase and helicase motifs of Has1p block U14 release from pre-rRNA [5].
  • Indeed, the sequence of stem II was essential for nucleolar localization of U14 snoRNA microinjected into HeLa cells [6].
  • Here we show that four novel snoRNAs identified as members of U14-containing gene clusters each show distinct sub-nucleolar localizations [7].
  • Comparative analysis with the previously reported rat and human cognate hsc70 genes revealed a similar positioning of U14 snRNA-homologous sequences within introns 5, 6 and 8 of the respective rat and human genes [8].
 

Biological context of SNORD14A

  • U14 snoRNA genes are positioned in introns 3 and 5 of the S13 gene [9].
  • Electrophoretic mobility-shift analysis demonstrated that all the sequences and structures of the box C/D core motif required for U14 processing are also necessary for protein binding and snoRNP assembly [10].
  • U14 snoRNA is a member of the larger, box C/D snoRNA family and possesses nucleotide box C and D consensus sequences [10].
  • Thus, the elevated expression of both Hsc70 and U14 snoRNA might play a role in the heat resistant phenotype of the HR-1 cells [11].
 

Anatomical context of SNORD14A

 

Other interactions of SNORD14A

  • Competition studies also revealed that this factor is common to both intronic and non-intronic snoRNAs possessing nucleotide boxes C and D. Immunoprecipitation of full-length and internally deleted U14 snoRNA molecules demonstrated that the terminal region containing boxes C and D does not bind fibrillarin [12].
 

Analytical, diagnostic and therapeutic context of SNORD14A

  • One of the isolated maize clones contains a cluster of four U14 genes in a region of only 761 bp, confirming the close linkage of U14 genes in maize, potato and barley as established by PCR [13].
  • This digestion data was then utilized in concert with the comparative sequence analysis of aligned U14 snRNA primary sequences to refine the secondary structure model suggested by computer-predicted folding [14].
  • METHODS: Anthropometry, maturity status, functional and sport-specific parameters were assessed in elite, sub-elite, and non-elite youth players in four age groups: U13 (n = 117), U14 (n = 136), U15 (n = 138) and U16 (n = 99) [15].

References

  1. Persistence of human herpesvirus 7 in normal tissues detected by expression of a structural antigen. Kempf, W., Adams, V., Mirandola, P., Menotti, L., Di Luca, D., Wey, N., Müller, B., Campadelli-Fiume, G. J. Infect. Dis. (1998) [Pubmed]
  2. Structural basis for poor uracil excision from hairpin DNA. An NMR study. Ghosh, M., Rumpal, N., Varshney, U., Chary, K.V. Eur. J. Biochem. (2002) [Pubmed]
  3. Inhibition of tumor metastasis in vivo by combination of paclitaxel and hyaluronic acid. Yin, D.S., Ge, Z.Q., Yang, W.Y., Liu, C.X., Yuan, Y.J. Cancer Lett. (2006) [Pubmed]
  4. Clusters of multiple different small nucleolar RNA genes in plants are expressed as and processed from polycistronic pre-snoRNAs. Leader, D.J., Clark, G.P., Watters, J., Beven, A.F., Shaw, P.J., Brown, J.W. EMBO J. (1997) [Pubmed]
  5. The Helicase Has1p Is Required for snoRNA Release from Pre-rRNA. Liang, X.H., Fournier, M.J. Mol. Cell. Biol. (2006) [Pubmed]
  6. Conserved stem II of the box C/D motif is essential for nucleolar localization and is required, along with the 15.5K protein, for the hierarchical assembly of the box C/D snoRNP. Watkins, N.J., Dickmanns, A., Lührmann, R. Mol. Cell. Biol. (2002) [Pubmed]
  7. Localization and processing from a polycistronic precursor of novel snoRNAs in maize. Shaw, P.J., Beven, A.F., Leader, D.J., Brown, J.W. J. Cell. Sci. (1998) [Pubmed]
  8. Mouse U14 snRNA is encoded in an intron of the mouse cognate hsc70 heat shock gene. Liu, J., Maxwell, E.S. Nucleic Acids Res. (1990) [Pubmed]
  9. U14 snoRNAs are encoded in introns of human ribosomal protein S13 gene. Kenmochi, N., Higa, S., Yoshihama, M., Tanaka, T. Biochem. Biophys. Res. Commun. (1996) [Pubmed]
  10. In vitro assembly of the mouse U14 snoRNP core complex and identification of a 65-kDa box C/D-binding protein. Watkins, N.J., Newman, D.R., Kuhn, J.F., Maxwell, E.S. RNA (1998) [Pubmed]
  11. Amplification and altered expression of the hsc70/U14 snoRNA gene in a heat resistant Chinese hamster cell line. Chen, M.S., Featherstone, T., Laszlo, A. Cell Stress Chaperones (1996) [Pubmed]
  12. Elements essential for processing intronic U14 snoRNA are located at the termini of the mature snoRNA sequence and include conserved nucleotide boxes C and D. Watkins, N.J., Leverette, R.D., Xia, L., Andrews, M.T., Maxwell, E.S. RNA (1996) [Pubmed]
  13. Molecular characterisation of plant U14 small nucleolar RNA genes: closely linked genes are transcribed as polycistronic U14 transcripts. Leader, D.J., Sanders, J.F., Waugh, R., Shaw, P., Brown, J.W. Nucleic Acids Res. (1994) [Pubmed]
  14. Proposed secondary structure of eukaryotic U14 snRNA. Shanab, G.M., Maxwell, E.S. Nucleic Acids Res. (1991) [Pubmed]
  15. A multidisciplinary selection model for youth soccer: the Ghent Youth Soccer Project. Vaeyens, R., Malina, R.M., Janssens, M., Van Renterghem, B., Bourgois, J., Vrijens, J., Philippaerts, R.M. British journal of sports medicine. (2006) [Pubmed]
 
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