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Gene Review

strB  -  APH6

Escherichia coli

 
 
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Disease relevance of strB

  • All ampicillin- and streptomycin-resistant E. coli O26 carried ampC and strA-strB gene sequences, respectively [1].
  • Three streptomycin (SM) production genes from Streptomyces griseus clustered around aphD, the major resistance gene, have been sequenced: strB, coding for an aminocyclitol amidinotransferase, ORF5 (strR), a putative regulatory gene, and ORF1 (strD), possibly coding for a hexose nucleotidylating enzyme [2].
  • Deletions in either of the genes in the strA-strB gene pair of Erwinia amylovora plasmid pEa34 resulted in a dramatic decrease in streptomycin resistance (SmR), but SmR was restored to high levels by complementation [3].
  • A PCR was developed and used for detection of the strA-strB gene pair encoding streptomycin resistance in gram-negative bacteria [4].
  • Several strains, which belonged to different species of Neisseria, were resistant to beta-lactams, streptomycin, sulfamethoxazole, and trimethoprim, harbored a 6.0-megadalton plasmid with identical HinfI restriction patterns, and produced beta-lactamase and streptomycin phosphotransferase [5].
 

High impact information on strB

  • Other genes conferring resistance to aminoglycosides (aacC2, strA, and strB), chloramphenicol (catA2), sulfonamides (sul2), tetracycline (tetD), and trimethoprim (dfrA14) were also detected in pK245 [6].
  • We conclude that an R plasmid coding for beta-lactamase, streptomycin phosphotransferase, and a sulfonamide-resistant dihydropteroate synthetase is common to these strains [5].
  • Negative associations were found between resistance genes encoding resistance to the same antimicrobial agent: tet(A)/tet(B), sul1/sul2 and strA-strB/aadA1 [7].
  • PCR was carried out for detection of the streptomycin resistance genes strA-strB and the integron-associated aadA gene cassettes [8].
  • A gene (hur) from Streptomyces aureofaciens, conferring resistance to hydroxyurea, is related to genes encoding streptomycin phosphotransferase [9].
 

Chemical compound and disease context of strB

 

Biological context of strB

  • Other plasmids carrying floR and aadB also carried tet(A), sul2, strA/strB, bla(CMY-2) and occasionally aac(3)IV [11].
  • An str gene cluster containing at least four genes (strR, strA, strB, and strC) involved in streptomycin biosynthesis or streptomycin resistance or both was self-cloned in Streptomyces griseus by using plasmid pOA154 [12].
  • The promoter region of the sph gene appears to be complex since tandemly arranged promoters (orfIp1, orfIp2) initiating transcription of a likely coding region (ORFI) in the opposite direction overlap sph promoter sequences [10].
  • Evidence for an ATG as translation start codon for sph was derived from a comparison with the amino-terminal amino acid sequence of an aminoglycoside phosphotransferase (aphD gene product) of S. griseus, exhibiting a high degree of amino acid homology to the deduced amino acid sequence of the S. glaucescens sph gene product [10].
  • It contains a conditional origin of replication (oriR6K), the strAB genes encoding the streptomycin phosphotransferase (SmR), an origin of transfer (mobRK2), the sacB gene mediating sucrose sensitivity, and multiple cloning sites [13].
 

Associations of strB with chemical compounds

  • Moreover, a truncated copy of Tn5393 with complete streptomycin resistance genes strA and strB was found upstream of the floR gene of pMBSF1 [14].
  • The broad host range cosmid pLZO3 carries a gentamicin acetyltransferase gene as bacterial selective marker and tandem, chimeric neomycin and streptomycin phosphotransferase genes as plant selective markers [15].

References

  1. Characterization of antimicrobial resistance patterns and class 1 integrons in Escherichia coli O26 isolated from humans and animals. Srinivasan, V., Gillespie, B.E., Nguyen, L.T., Headrick, S.I., Murinda, S.E., Oliver, S.P. Int. J. Antimicrob. Agents (2007) [Pubmed]
  2. Gene cluster for streptomycin biosynthesis in Streptomyces griseus: nucleotide sequence of three genes and analysis of transcriptional activity. Distler, J., Ebert, A., Mansouri, K., Pissowotzki, K., Stockmann, M., Piepersberg, W. Nucleic Acids Res. (1987) [Pubmed]
  3. Expression and identification of the strA-strB gene pair from streptomycin-resistant Erwinia amylovora. Chiou, C.S., Jones, A.L. Gene (1995) [Pubmed]
  4. Antibiotic resistance in Escherichia coli of the normal intestinal flora of swine. Sunde, M., Fossum, K., Solberg, A., Sørum, H. Microb. Drug Resist. (1998) [Pubmed]
  5. Multiresistance plasmid from commensal Neisseria strains. Pintado, C., Salvador, C., Rotger, R., Nombela, C. Antimicrob. Agents Chemother. (1985) [Pubmed]
  6. Complete Nucleotide Sequence of pK245, a 98-Kilobase Plasmid Conferring Quinolone Resistance and Extended-Spectrum-{beta}-Lactamase Activity in a Clinical Klebsiella pneumoniae Isolate. Chen, Y.T., Shu, H.Y., Li, L.H., Liao, T.L., Wu, K.M., Shiau, Y.R., Yan, J.J., Su, I.J., Tsai, S.F., Lauderdale, T.L. Antimicrob. Agents Chemother. (2006) [Pubmed]
  7. The prevalence of, associations between and conjugal transfer of antibiotic resistance genes in Escherichia coli isolated from Norwegian meat and meat products. Sunde, M., Norström, M. J. Antimicrob. Chemother. (2006) [Pubmed]
  8. The genetic background for streptomycin resistance in Escherichia coli influences the distribution of MICs. Sunde, M., Norström, M. J. Antimicrob. Chemother. (2005) [Pubmed]
  9. A gene (hur) from Streptomyces aureofaciens, conferring resistance to hydroxyurea, is related to genes encoding streptomycin phosphotransferase. Kormanec, J., Farkasovský, M., Potúcková, L., Godár, S. Gene (1992) [Pubmed]
  10. Characterisation of the hydroxystreptomycin phosphotransferase gene (sph) of Streptomyces glaucescens: nucleotide sequence and promoter analysis. Vögtli, M., Hütter, R. Mol. Gen. Genet. (1987) [Pubmed]
  11. Chloramphenicol and kanamycin resistance among porcine Escherichia coli in Ontario. Travis, R.M., Gyles, C.L., Reid-Smith, R., Poppe, C., McEwen, S.A., Friendship, R., Janecko, N., Boerlin, P. J. Antimicrob. Chemother. (2006) [Pubmed]
  12. Self-cloning in Streptomyces griseus of an str gene cluster for streptomycin biosynthesis and streptomycin resistance. Ohnuki, T., Imanaka, T., Aiba, S. J. Bacteriol. (1985) [Pubmed]
  13. A wide-host-range suicide vector for improving reverse genetics in gram-negative bacteria: inactivation of the blaA gene of Yersinia enterocolitica. Kaniga, K., Delor, I., Cornelis, G.R. Gene (1991) [Pubmed]
  14. Molecular analysis of florfenicol-resistant Escherichia coli isolates from pigs. Blickwede, M., Schwarz, S. J. Antimicrob. Chemother. (2004) [Pubmed]
  15. A DNA transformation-competent Arabidopsis genomic library in Agrobacterium. Lazo, G.R., Stein, P.A., Ludwig, R.A. Biotechnology (N.Y.) (1991) [Pubmed]
 
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