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Disease relevance of LOC540432

  • A 14-amino acid arginine-rich peptide corresponding to the RNA-binding domain of BIV Tat binds specifically to BIV TAR, and biochemical and in vivo experiments have identified the amino acids and nucleotides required for binding [1].
  • By contrast, the amino terminus of N, the acidic carboxy-terminal domain, and a serine- and arginine-rich segment of the central domain could not be transferred from bovine coronavirus to MHV, presumably because these parts of the molecule participate in protein-protein interactions that are specific for each virus (or, possibly, each host) [2].
 

High impact information on LOC540432

  • The primary structure of mammalian protamine I can be divided into three domains, a central DNA binding domain that is arginine-rich and amino- and carboxyl-terminal domains that are rich in cysteine residues [3].
  • Phosphatidylinositol (4,5)-bisphosphate-dependent activation of dynamins I and II lacking the proline/arginine-rich domains [4].
  • Bac5 is a 5-kDa proline- and arginine-rich antibiotic, stored as inactive precursor (proBac5) in the large granules of bovine neutrophils [5].
  • Only cyclic GMP bound to the high affinity site (Site I) correlated with stimulation of histone kinase activity using arginine-rich histone as the substrate; however, both sites were involved with stimulation of histone kinase activity using mixed histones as the substrate [6].
  • A nucleosome-like structure containing DNA and the arginine-rich histones H3 and H4 [7].
 

Biological context of LOC540432

 

Anatomical context of LOC540432

 

Associations of LOC540432 with chemical compounds

  • Thus, the arginine-rich histones and the tightly bound non-histones are most responsible for limiting the binding of ethidium bromide to rye chromatin [18].
  • Lysine-rich and arginine-rich histones serve as the most effective exogenous protein acceptors; P. polycephalum actomyosin is inactive, and chick skeletal myofibrillar proteins are 25% as effective as exogenous mixed histones as substrates [19].
  • N(G)-Methylation of arginine residues in many nucleic-acid-binding proteins are formed post-translationally, catalysed by S-adenosylmethionine:protein-arginine N-methyltransferase in their glycine-rich and arginine-rich motifs [20].
  • Furthermore, only a small amount of O-bound radioactivity was released by the 14C-labeled acetylated arginine-rich histone during treatment with hydroxylamine [9].
  • In the case of arginine-rich histones H3 (III or f3) and H4 (IV or f2a1), four methods were used for making complexes with calf thymus DNA: (A) NaCl gradient dialysis with urea; (B) NaCl gradient dialysis without urea; (C) direct mixing in 2.5 x 10(-4) EDTA, pH 8.0; and (D) direct mixing in 0.01 M sodium phosphate, pH 7 [21].
 

Other interactions of LOC540432

 

Analytical, diagnostic and therapeutic context of LOC540432

References

  1. Solution structure of a bovine immunodeficiency virus Tat-TAR peptide-RNA complex. Puglisi, J.D., Chen, L., Blanchard, S., Frankel, A.D. Science (1995) [Pubmed]
  2. Construction of murine coronavirus mutants containing interspecies chimeric nucleocapsid proteins. Peng, D., Koetzner, C.A., McMahon, T., Zhu, Y., Masters, P.S. J. Virol. (1995) [Pubmed]
  3. Formation of native-like mammalian sperm cell chromatin with folded bull protamine. Vilfan, I.D., Conwell, C.C., Hud, N.V. J. Biol. Chem. (2004) [Pubmed]
  4. Phosphatidylinositol (4,5)-bisphosphate-dependent activation of dynamins I and II lacking the proline/arginine-rich domains. Lin, H.C., Barylko, B., Achiriloaie, M., Albanesi, J.P. J. Biol. Chem. (1997) [Pubmed]
  5. The cDNA of the neutrophil antibiotic Bac5 predicts a pro-sequence homologous to a cysteine proteinase inhibitor that is common to other neutrophil antibiotics. Zanetti, M., Del Sal, G., Storici, P., Schneider, C., Romeo, D. J. Biol. Chem. (1993) [Pubmed]
  6. Bovine lung cyclic GMP-dependent protein kinase exhibits two types of specific cyclic GMP-binding sites. Mackenzie, C.W. J. Biol. Chem. (1982) [Pubmed]
  7. A nucleosome-like structure containing DNA and the arginine-rich histones H3 and H4. Moss, T., Stephens, R.M., Crane-Robinson, C., Bradbury, E.M. Nucleic Acids Res. (1977) [Pubmed]
  8. Physical studies of nucleosome assemble. Klevan, L., Dattagupta, N., Hogan, M., Crothers, D.M. Biochemistry (1978) [Pubmed]
  9. Nonenzymatic acetylation of histones with acetyl phosphate and acetyl adenylate. Ramponi, G., Manao, G., Camici, G. Biochemistry (1975) [Pubmed]
  10. Protein kinase C-alpha mediates endothelial barrier dysfunction induced by TNF-alpha. Ferro, T., Neumann, P., Gertzberg, N., Clements, R., Johnson, A. Am. J. Physiol. Lung Cell Mol. Physiol. (2000) [Pubmed]
  11. Partial purification and characterization of cAMP-dependent protein kinase from Fasciola hepatica. Iltzsch, M.H., Mansour, T.E. Mol. Biochem. Parasitol. (1987) [Pubmed]
  12. Lability to acid hydrolysis in some different DNA-protein complexes of spermatozoa. Silva, M.J., Mello, M.L. Acta Histochem. (1986) [Pubmed]
  13. Complexes of DNA with histones f2a2 and f3. Circular dichroism studies. Adler, A.J., Moran, E.C., Fasman, G.D. Biochemistry (1975) [Pubmed]
  14. Na,K-ATPases of the lens epithelium and fiber cell: formation of catalytic cycle intermediates and Na+: K+ exchange. Garner, M.H. Exp. Eye Res. (1994) [Pubmed]
  15. Inhibition of mammary gland cyclic AMP-dependent protein kinase by arginine-rich histones. Bear, J.L., Zalitis, J.G., Mackinlay, A.G. Biochem. Biophys. Res. Commun. (1978) [Pubmed]
  16. A very rapidly migrating f1 histone associated with gene-sized pieces of DNA in the macronucleus of Oxytricha sp. Caplan, E.B. Biochim. Biophys. Acta (1975) [Pubmed]
  17. Phosphoprotein phosphatases for myelin basic protein in myelin and cytosol fractions of brain. Miyamoto, E., Kakiuchi, S. Biochim. Biophys. Acta (1975) [Pubmed]
  18. A study of the interaction between ethidium bromide and rye chromatin: comparison with calf thymus chromatin. LaRue, H., Pallotta, D. Nucleic Acids Res. (1976) [Pubmed]
  19. Partial purification and characterization of a protein lysine methyltransferase from plasmodia of Physarum polycephalum. Venkatesan, M., McManus, I.R. Biochemistry (1979) [Pubmed]
  20. Enzymic methylation of arginyl residues in -gly-arg-gly- peptides. Hyun, Y.L., Lew, D.B., Park, S.H., Kim, C.W., Paik, W.K., Kim, S. Biochem. J. (2000) [Pubmed]
  21. Interactions between arginine-rich histones and deoxyribonucleic acids. I. Thermal denaturation. Yu, S.S., Li, H.J., Shih, T.Y. Biochemistry (1976) [Pubmed]
  22. Molecular cloning of Bac7, a proline- and arginine-rich antimicrobial peptide from bovine neutrophils. Scocchi, M., Romeo, D., Zanetti, M. FEBS Lett. (1994) [Pubmed]
  23. Purification and properties of a cyclic AMP-independent protein kinase from calf thymus nuclei. Kranias, E.G., Jungmann, R.A. Biochim. Biophys. Acta (1978) [Pubmed]
  24. Interactions between arginine-rich histones and deoxyribonucleic acids. II. Circular dichroism. Yu, S.S., Li, H.J., Shih, T.Y. Biochemistry (1976) [Pubmed]
  25. Purification of histone F3 by covalent chromatography. Oster, O., Buchlow, G. Z. Naturforsch., C, Biosci. (1977) [Pubmed]
  26. Complexes of DNA with arginine-rich and slightly lysine-rich histones. Transcription and electron microscopy. Weihe, A., von Mickwitz, C.U., Grade, K., Lindigkeit, R. Biochim. Biophys. Acta (1978) [Pubmed]
 
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