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Gene Review

MBD5  -  methyl-CPG-binding domain protein 5

Arabidopsis thaliana

Synonyms: ATMBD5, MBD05, MDB05, METHYL-CPG-BINDING DOMAIN PROTEIN 05
 
 
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Disease relevance of MBD5

  • All the corresponding polypeptides, expressed in Escherichia coli as His-tagged recombinant proteins, have been functionally tested on gel shift experiments but only two of them (namely MBD5, 6) were able to specifically bind methylated CpG oligonucleotides [1].
 

High impact information on MBD5

  • By expressing in wild-type cells AtMBDs fused to green fluorescent protein (GFP), we showed that AtMBD7 was evenly distributed at all chromocenters, whereas AtMBD5 and 6 showed preference for two perinucleolar chromocenters adjacent to nucleolar organizing regions [2].
  • Recruitment of AtMBD5, 6, and 7 to chromocenters was disrupted in ddm1 and met1 mutant cells, where a significant reduction in cytosine methylation occurs [2].
  • We found that AtMBD7 (subclass VI), a unique protein containing a double MBD motif, as well as AtMBD5 and AtMBD6 (subclass IV), bind specifically symmetrically methylated CpG sites [3].
  • Because m5Cs in CpG and CpNpN are considered to function in gene expression and gene silencing, respectively, the present results suggest that AtMBD5 may have distinct functions in regulation and/or self defense of genes in actively proliferating cells [4].
 

Anatomical context of MBD5

 

Analytical, diagnostic and therapeutic context of MBD5

  • One example, AtMBD5, was selected here to screen for interacting proteins. * Methods Yeast two-hybrid assays were used for screening, and physical interaction was confirmed by pull-down and bimolecular fluorescence complementation (BiFC) assays [5].

References

  1. Arabidopsis MBD proteins show different binding specificities and nuclear localization. Scebba, F., Bernacchia, G., De Bastiani, M., Evangelista, M., Cantoni, R.M., Cella, R., Locci, M.T., Pitto, L. Plant Mol. Biol. (2003) [Pubmed]
  2. DDM1 binds Arabidopsis methyl-CpG binding domain proteins and affects their subnuclear localization. Zemach, A., Li, Y., Wayburn, B., Ben-Meir, H., Kiss, V., Avivi, Y., Kalchenko, V., Jacobsen, S.E., Grafi, G. Plant Cell (2005) [Pubmed]
  3. Characterization of Arabidopsis thaliana methyl-CpG-binding domain (MBD) proteins. Zemach, A., Grafi, G. Plant J. (2003) [Pubmed]
  4. Methylated DNA-binding proteins from Arabidopsis. Ito, M., Koike, A., Koizumi, N., Sano, H. Plant Physiol. (2003) [Pubmed]
  5. Interaction Between Methyl CpG-Binding Protein and Ran GTPase during Cell Division in Tobacco Cultured Cells. Yano, A., Kodama, Y., Koike, A., Shinya, T., Kim, H.J., Matsumoto, M., Ogita, S., Wada, Y., Ohad, N., Sano, H. Ann. Bot. (2006) [Pubmed]
 
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