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DPB4  -  Dpb4p

Saccharomyces cerevisiae S288c

Synonyms: DNA polymerase II subunit D, DNA polymerase epsilon subunit D, YDR121W
 
 
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High impact information on DPB4

  • Both proteins, Dpb4p and Yjl065cp (named Dls1p), contain histone fold motifs and are homologous to the two smallest subunits of ISWI-containing CHRAC complexes in higher eukaryotes [1].
  • Furthermore, additional amino acid substitutions to lysines in Dpb4p, to compensate for the loss of positive charges in the Dpb3p mutants, resulted in simultaneous restoration of dsDNA-binding activity by Pol epsilon and telomeric silencing [2].
  • DNA polymerase epsilon (pol epsilon) is a multiple subunit complex consisting of at least four proteins, including catalytic Pol2p, Dpb2p, Dpb3p, and Dpb4p [3].
  • Both proteins contain histone fold motifs which are present also in S. cerevisiae DPB4 and DPB3 [4].
  • A major form of pol epsilon purified from yeast consists of at least four subunits: Pol2p, Dpb2p, Dpb3p, and Dpb4p [5].
 

Biological context of DPB4

  • A deletion mutant of DPB4 (Deltadpb4) is not lethal, but chromosomal DNA replication is slightly disturbed in this mutant [6].
  • Structural homologues of DPB4 are present in other eukaryotic genomes, suggesting that the complex structure of S. cerevisiae Polepsilon is conserved in eukaryotes [6].
  • This paper reports the partial amino acid sequence of the fourth subunit (Dpb4p) of Polepsilon [6].
  • These results strongly suggest that Dpb4p plays an important role in maintaining the complex structure of Polepsilon in S.cerevisiae, even if it is not essential for cell growth [6].

References

  1. Histone fold protein Dls1p is required for Isw2-dependent chromatin remodeling in vivo. McConnell, A.D., Gelbart, M.E., Tsukiyama, T. Mol. Cell. Biol. (2004) [Pubmed]
  2. Double-stranded DNA Binding, an Unusual Property of DNA Polymerase {epsilon}, Promotes Epigenetic Silencing in Saccharomyces cerevisiae. Tsubota, T., Tajima, R., Ode, K., Kubota, H., Fukuhara, N., Kawabata, T., Maki, S., Maki, H. J. Biol. Chem. (2006) [Pubmed]
  3. In vivo reconstitution of Saccharomyces cerevisiae DNA polymerase epsilon in insect cells. Purification and characterization. Dua, R., Levy, D.L., Li, C.M., Snow, P.M., Campbell, J.L. J. Biol. Chem. (2002) [Pubmed]
  4. Identification and cloning of two histone fold motif-containing subunits of HeLa DNA polymerase epsilon. Li, Y., Pursell, Z.F., Linn, S. J. Biol. Chem. (2000) [Pubmed]
  5. Subunit interactions within the Saccharomyces cerevisiae DNA polymerase epsilon (pol epsilon ) complex. Demonstration of a dimeric pol epsilon. Dua, R., Edwards, S., Levy, D.L., Campbell, J.L. J. Biol. Chem. (2000) [Pubmed]
  6. Structure and function of the fourth subunit (Dpb4p) of DNA polymerase epsilon in Saccharomyces cerevisiae. Ohya, T., Maki, S., Kawasaki, Y., Sugino, A. Nucleic Acids Res. (2000) [Pubmed]
 
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