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Gene Review

LYS1  -  saccharopine dehydrogenase (NAD+, L-lysine...

Saccharomyces cerevisiae S288c

Synonyms: Lysine--2-oxoglutarate reductase, SDH, YIR034C
 
 
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High impact information on LYS1

  • The predicted polypeptide has an N-terminal LKR domain and a C-terminal SDH domain that are similar to the yeast LYS1 and LYS9 monofunctional proteins, respectively [1].
  • We have isolated a cDNA clone, designated ZLKRSDH, encoding the bifunctional enzyme lysine-ketoglutarate reductase/saccharopine dehydrogenase (LKR/SDH) from maize [1].
  • The Schizosaccharomyces pombe centromere-linked genes, LYS1 and CYH1 on chromosome I and TPS13 and RAN1 on chromosome II, have been isolated [2].
  • Mutants affected at the LYS5 locus of Yarrowia lipolytica lack detectable dehydrogenase (SDH) activity [3].
  • Both ORFs appear to be transcribed, but several lines of evidence suggest that only ORF2 is translated and encodes SDH [3].
 

Biological context of LYS1

  • The LYS1 gene of Candida albicans has been localized to a 1.8-kb DNA fragment present on the plasmid YpBRG2 [4].
  • The DNA sequence of the LYS1 gene has been determined [4].
  • Deletion of the LYS1 gene resulted in a Lys- phenotype [5].
  • Clones from genomic libraries in this vector were isolated by direct complementation of the auxotrophies in strain 1006 (arg57 ser57 lys1 ura3 MPA1) [6].
  • The gene order and intergenic distances were estimated to be: dal1--2.5 cM--dal4--1.9cM--dal2--4.6cM-lys1 [7].
 

Associations of LYS1 with chemical compounds

  • Lysine biosynthesis in selected pathogenic fungi: characterization of lysine auxotrophs and the cloned LYS1 gene of Candida albicans [8].
  • In yeast, lysine-ketoglutarate reductase and saccharopine dehydrogenase are encoded by the LYS1 and LYS9 genes, respectively, and we searched the available sequence databases for their human homologues [9].
  • Cloning and sequencing of the LYS1 gene encoding homocitrate synthase in the yeast Yarrowia lipolytica [5].
  • Lysine auxotrophs lys1, lys2 and lys3 of R. glutinis, unlike lysine auxotrophs of Saccharomyces cerevisiae, satisfied their growth requirement with L-pipecolate [10].
  • Analogs containing Gly or Leu or many different aromatic residues in position 1 of the peptide exhibited bioactivity in a growth arrest assay slightly greater than, or equal to, that of the parent pheromone, whereas the Glu1 and Lys1 analogs exhibited significantly lower bioactivity [11].
 

Other interactions of LYS1

  • Genes LYS1, LYS9 and LYS14 have been cloned and their DNAs used to assay the corresponding messenger RNAs [12].
  • The LYS1 DNA contains typical yeast upstream regulatory sequences, including the GCN4 motif and candidate sequences responsible for transcription termination within the 3' noncoding region [4].
  • Both LYS1 and LYS5 DNA-specific PCR primers SG1, SG2 and SG3, SG4, respectively, amplified predicted 483 and 648-bp fragments from Candida albicans genomic DNA but not from other selected fungal, bacterial, or human DNA [13].
  • Molecular properties of the cloned lys1+ gene and the regulation of the encoded alpha-aminoadipate reductase (AAR) were investigated in the fission yeast Schizosaccharomyces pombe [14].
 

Analytical, diagnostic and therapeutic context of LYS1

  • Northern blot hybridizations revealed a LYS1 transcript of approximately 1.7 kb in Y. lipolytica [5].

References

  1. The role of opaque2 in the control of lysine-degrading activities in developing maize endosperm. Kemper, E.L., Neto, G.C., Papes, F., Moraes, K.C., Leite, A., Arruda, P. Plant Cell (1999) [Pubmed]
  2. Analysis of centromeric DNA in the fission yeast Schizosaccharomyces pombe. Clarke, L., Amstutz, H., Fishel, B., Carbon, J. Proc. Natl. Acad. Sci. U.S.A. (1986) [Pubmed]
  3. Overlapping reading frames at the LYS5 locus in the yeast Yarrowia lipolytica. Xuan, J.W., Fournier, P., Declerck, N., Chasles, M., Gaillardin, C. Mol. Cell. Biol. (1990) [Pubmed]
  4. Molecular and functional analysis of the LYS1 gene of Candida albicans. Garrad, R., Schmidt, T.M., Bhattacharjee, J.K. Infect. Immun. (1994) [Pubmed]
  5. Cloning and sequencing of the LYS1 gene encoding homocitrate synthase in the yeast Yarrowia lipolytica. Perez-Campo, F.M., Nicaud, J.M., Gaillardin, C., Dominguez, A. Yeast (1996) [Pubmed]
  6. Gene isolation by complementation in Candida albicans and applications to physical and genetic mapping. Goshorn, A.K., Grindle, S.M., Scherer, S. Infect. Immun. (1992) [Pubmed]
  7. A cluster of three genes responsible for allantoin degradation in Saccharomyces cerevisiae. Cooper, T.G., Gorski, M., Turoscy, V. Genetics (1979) [Pubmed]
  8. Lysine biosynthesis in selected pathogenic fungi: characterization of lysine auxotrophs and the cloned LYS1 gene of Candida albicans. Garrad, R.C., Bhattacharjee, J.K. J. Bacteriol. (1992) [Pubmed]
  9. Identification of the alpha-aminoadipic semialdehyde synthase gene, which is defective in familial hyperlysinemia. Sacksteder, K.A., Biery, B.J., Morrell, J.C., Goodman, B.K., Geisbrecht, B.V., Cox, R.P., Gould, S.J., Geraghty, M.T. Am. J. Hum. Genet. (2000) [Pubmed]
  10. Biosynthesis of lysine in Rhodotorula glutinis: role of pipecolic acid. Kurtz, M., Bhattacharjee, J.K. J. Gen. Microbiol. (1975) [Pubmed]
  11. Position one analogs of the Saccharomyces cerevisiae tridecapeptide pheromone. Zhang, Y.L., Lu, H.F., Becker, J.M., Naider, F. J. Pept. Res. (1997) [Pubmed]
  12. Control of enzyme synthesis in the lysine biosynthetic pathway of Saccharomyces cerevisiae. Evidence for a regulatory role of gene LYS14. Ramos, F., Dubois, E., Piérard, A. Eur. J. Biochem. (1988) [Pubmed]
  13. Novel lysine biosynthetic gene sequences (LYS1 and LYS5) used as PCR targets for the detection of the pathogenic Candida yeast. Guo, S., Bhattacharjee, J.K. Appl. Microbiol. Biotechnol. (2006) [Pubmed]
  14. Molecular properties of the lys1+ gene and the regulation of alpha-aminoadipate reductase in Schizosaccharomyces pombe. Ford, R.A., Bhattacharjee, J.K. Curr. Genet. (1995) [Pubmed]
 
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