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Gene Review

ECs4200  -  FKBP-type peptidylprolyl isomerase

Escherichia coli O157:H7 str. Sakai

 
 
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Disease relevance of ECs4200

  • To gain access to the full set of PPIases in E. coli, SlyD, the N-terminal fragment of SlyD devoid of the histidine-rich region, as well as the protein product of ORF149 of E. coli named SlpA (SlyD-like protein) were cloned, overexpressed, and purified to apparent homogeneity [1].
  • In this study, the Rv2131c gene from Mycobacterium tuberculosis H37Rv was cloned into the pET28a vector and the recombinant plasmid was transformed into Escherichia coli BL21 (DE3) strain, allowing the expression of the enzyme in fusion with a histidine-rich peptide on the N-terminal [2].
  • Expression and characterization of a histidine-rich protein, Hpn: potential for Ni2+ storage in Helicobacter pylori [3].
 

High impact information on ECs4200

  • Here we show that a variant of SurA lacking both parvulin-like domains exhibits a PPIase-independent chaperone-like activity in vitro and almost completely complements the in vivo function of intact SurA [4].
  • Crosslinking experiments showed that a TF fragment containing the PPIase domain linked to the ribosome via the N-terminal domain is sufficient for interaction with nascent polypeptide substrates [5].
  • The existence of the histidine leader RNA lends support to the regulatory mechanism which postulates that regulation of the histidine operon is dependent on the alternative secondary structures that the leader RNA may assume, depending on whether or not the histidine-rich leader peptide is translated [6].
  • TPBF has two potential coiled-coil regions, a basic region, a proline-rich region, a histidine-rich N terminus, and a nuclear targeting sequence [7].
  • The rotA gene of Escherichia coli encodes a peptidyl-prolyl cis/trans isomerase (PPIase), which is supposed to catalyse protein folding in the periplasm [8].
 

Biological context of ECs4200

 

Anatomical context of ECs4200

  • The pH-dependent properties of histidine-rich antimicrobial peptides may allow the design of agents that would function selectively in acidic compartments, such as the gastric lumen, or within phagolysosomes [14].
  • Clavanins are histidine-rich, amidated alpha-helical antimicrobial peptides that were originally isolated from the leukocytes (hemocytes) of a tunicate, Styela clava [14].
  • As compared to the approx. 50 kDa mature protein, in the cell-free system HRP was synthesized as an approx. 58 kDa precursor polypeptide [15].
 

Associations of ECs4200 with chemical compounds

  • A nodule-specific gene family from Alnus glutinosa encodes glycine- and histidine-rich proteins expressed in the early stages of actinorhizal nodule development [11].
  • The histidine-rich C-terminal region of NreB was not essential but contributed to maximal Ni(2+) resistance [16].
  • LIM domains are cysteine/histidine-rich domains that contain two structural zinc ions and that function as protein-protein adaptors; members of the LMO family each contain two closely spaced LIM domains [17].
  • Site-directed mutagenesis demonstrated that a substitution of an Asp residue at position 142 by a Leu residue affects PPIase activity of Mip [18].
  • Furthermore, truncated HRGP, devoid of the heparin-binding and histidine-rich domain, was not antibacterial [19].
 

Analytical, diagnostic and therapeutic context of ECs4200

  • The primary structure of a parasite-derived histidine-rich protein associated with the knob structure was deduced from cDNA sequence analysis [20].
  • The expressed protein possessed a histidine-rich leader sequence for purification by Ni2+ chelate fast protein liquid chromatography [21].
  • Western blots and pulse-chase labelling experiments showed that both Epos and E are highly unstable in a slyD background; however, Epos is synthesized at a higher rate, allowing a lysis-sufficient level of Epos to accumulate [22].

References

  1. The Escherichia coli SlyD is a metal ion-regulated peptidyl-prolyl cis/trans-isomerase. Hottenrott, S., Schumann, T., Plückthun, A., Fischer, G., Rahfeld, J.U. J. Biol. Chem. (1997) [Pubmed]
  2. Rv2131c gene product: an unconventional enzyme that is both inositol monophosphatase and fructose-1,6-bisphosphatase. Gu, X., Chen, M., Shen, H., Jiang, X., Huang, Y., Wang, H. Biochem. Biophys. Res. Commun. (2006) [Pubmed]
  3. Expression and characterization of a histidine-rich protein, Hpn: potential for Ni2+ storage in Helicobacter pylori. Ge, R., Watt, R.M., Sun, X., Tanner, J.A., He, Q.Y., Huang, J.D., Sun, H. Biochem. J. (2006) [Pubmed]
  4. The SurA periplasmic PPIase lacking its parvulin domains functions in vivo and has chaperone activity. Behrens, S., Maier, R., de Cock, H., Schmid, F.X., Gross, C.A. EMBO J. (2001) [Pubmed]
  5. Binding specificity of Escherichia coli trigger factor. Patzelt, H., Rüdiger, S., Brehmer, D., Kramer, G., Vorderwülbecke, S., Schaffitzel, E., Waitz, A., Hesterkamp, T., Dong, L., Schneider-Mergener, J., Bukau, B., Deuerling, E. Proc. Natl. Acad. Sci. U.S.A. (2001) [Pubmed]
  6. In vivo and in vitro detection of the leader RNA of the histidine operon of Escherichia coli K-12. Frunzio, R., Bruni, C.B., Blasi, F. Proc. Natl. Acad. Sci. U.S.A. (1981) [Pubmed]
  7. Cloning, expression, and characterization of the TATA-binding protein (TBP) promoter binding factor, a transcription activator of the Acanthamoeba TBP gene. Huang, W., Bateman, E. J. Biol. Chem. (1995) [Pubmed]
  8. Characterization of an Escherichia coli rotA mutant, affected in periplasmic peptidyl-prolyl cis/trans isomerase. Kleerebezem, M., Heutink, M., Tommassen, J. Mol. Microbiol. (1995) [Pubmed]
  9. Two distinct forms of peptidylprolyl-cis-trans-isomerase are expressed separately in periplasmic and cytoplasmic compartments of Escherichia coli cells. Hayano, T., Takahashi, N., Kato, S., Maki, N., Suzuki, M. Biochemistry (1991) [Pubmed]
  10. Amino acid substitution and modification resulting from Escherichia coli expression of recombinant Plasmodium falciparum histidine-rich protein II. Schneider, E.L., King, D.S., Marletta, M.A. Biochemistry (2005) [Pubmed]
  11. A nodule-specific gene family from Alnus glutinosa encodes glycine- and histidine-rich proteins expressed in the early stages of actinorhizal nodule development. Pawlowski, K., Twigg, P., Dobritsa, S., Guan, C., Mullin, B.C. Mol. Plant Microbe Interact. (1997) [Pubmed]
  12. A novel histidine-rich CPx-ATPase from the filamentous cyanobacterium Oscillatoria brevis related to multiple-heavy-metal cotolerance. Tong, L., Nakashima, S., Shibasaka, M., Katsuhara, M., Kasamo, K. J. Bacteriol. (2002) [Pubmed]
  13. Chromosomal locus for cadmium resistance in Pseudomonas putida consisting of a cadmium-transporting ATPase and a MerR family response regulator. Lee, S.W., Glickmann, E., Cooksey, D.A. Appl. Environ. Microbiol. (2001) [Pubmed]
  14. Effects of pH and salinity on the antimicrobial properties of clavanins. Lee, I.H., Cho, Y., Lehrer, R.I. Infect. Immun. (1997) [Pubmed]
  15. The biosynthesis of the histidine-rich protein of Plasmodium lophurae and the cloning of its gene in Escherichia coli. Kilejian, A., Chen, S., Sloma, A. Mol. Biochem. Parasitol. (1985) [Pubmed]
  16. NreB from Achromobacter xylosoxidans 31A Is a nickel-induced transporter conferring nickel resistance. Grass, G., Fan, B., Rosen, B.P., Lemke, K., Schlegel, H.G., Rensing, C. J. Bacteriol. (2001) [Pubmed]
  17. Design, production and characterization of FLIN2 and FLIN4: the engineering of intramolecular ldb1:LMO complexes. Deane, J.E., Sum, E., Mackay, J.P., Lindeman, G.J., Visvader, J.E., Matthews, J.M. Protein Eng. (2001) [Pubmed]
  18. Characterization of Mip proteins of Legionella pneumophila. Ludwig, B., Rahfeld, J., Schmidt, B., Mann, K., Wintermeyer, E., Fischer, G., Hacker, J. FEMS Microbiol. Lett. (1994) [Pubmed]
  19. Histidine-rich glycoprotein exerts antibacterial activity. Rydengård, V., Olsson, A.K., Mörgelin, M., Schmidtchen, A. FEBS J. (2007) [Pubmed]
  20. Primary structure and subcellular localization of the knob-associated histidine-rich protein of Plasmodium falciparum. Pologe, L.G., Pavlovec, A., Shio, H., Ravetch, J.V. Proc. Natl. Acad. Sci. U.S.A. (1987) [Pubmed]
  21. Phosphorylation of nodulin 26 on serine 262 affects its voltage-sensitive channel activity in planar lipid bilayers. Lee, J.W., Zhang, Y., Weaver, C.D., Shomer, N.H., Louis, C.F., Roberts, D.M. J. Biol. Chem. (1995) [Pubmed]
  22. The Escherichia coli FKBP-type PPIase SlyD is required for the stabilization of the E lysis protein of bacteriophage phi X174. Bernhardt, T.G., Roof, W.D., Young, R. Mol. Microbiol. (2002) [Pubmed]
 
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