The world's first wiki where authorship really matters (Nature Genetics, 2008). Due credit and reputation for authors. Imagine a global collaborative knowledge base for original thoughts. Search thousands of articles and collaborate with scientists around the globe.

wikigene or wiki gene protein drug chemical gene disease author authorship tracking collaborative publishing evolutionary knowledge reputation system wiki2.0 global collaboration genes proteins drugs chemicals diseases compound
Hoffmann, R. A wiki for the life sciences where authorship matters. Nature Genetics (2008)
 
Gene Review

sbcC  -  exonuclease, dsDNA, ATP-dependent

Escherichia coli str. K-12 substr. MG1655

Synonyms: ECK0391, JW0387, rmuA
 
 
Welcome! If you are familiar with the subject of this article, you can contribute to this open access knowledge base by deleting incorrect information, restructuring or completely rewriting any text. Read more.
 

Disease relevance of sbcC

 

High impact information on sbcC

  • The sbcC and sbcD genes mediate palindrome inviability in Escherichia coli [4].
  • The dependence on homologous recombination for cell viability is overcome in sbcC mutants [5].
  • This phenotype was used to identify recombinant plasmids harbouring the wild-type gene and to isolate sbcC mutant derivatives carrying Tn1000 insertions [1].
  • The RecF pathway catalyzes generalized recombination in Escherichia coli that is mutant for recBC, sbcB and sbcC [6].
  • In one case, inactivation of the sbcC gene leads to an increase in rearrangements, and in another, insertions near the recE gene lead to an even larger increase [7].
 

Biological context of sbcC

  • The derived amino-acid sequences of the proteins encoded by E. coli genes sbcC and sbcD have been compared with other protein sequences using computer assisted methods [8].
  • The sequence of this upstream open reading frame was found to be identical to the previously reported sequence of the sbcC gene (I. S. Naom, S. J. Morton, D. R. F. Leach, and R. G. Lloyd, Nucleic Acids Res. 17:8033-8044, 1989) [9].
  • Escherichia coli sbcC mutants permit stable propagation of DNA replicons containing a long palindrome [10].
  • A deletion of the ykoV gene encoding the B. subtilis Ku protein in a sbcC mutant strain did not resulted in an increase in sensitivity towards MMC and gamma irradiation, but exacerbated the phenotype of a recN or a recA mutant strain [3].
 

Other interactions of sbcC

  • This requirement is suppressed by either an additional sbcA or sbcC mutation, but not by an sbcB mutation [11].

References

  1. Molecular organization of sbcC, a gene that affects genetic recombination and the viability of DNA palindromes in Escherichia coli K-12. Naom, I.S., Morton, S.J., Leach, D.R., Lloyd, R.G. Nucleic Acids Res. (1989) [Pubmed]
  2. Identification of sbcD mutations as cosuppressors of recBC that allow propagation of DNA palindromes in Escherichia coli K-12. Gibson, F.P., Leach, D.R., Lloyd, R.G. J. Bacteriol. (1992) [Pubmed]
  3. Bacillus subtilis SbcC protein plays an important role in DNA inter-strand cross-link repair. Mascarenhas, J., Sanchez, H., Tadesse, S., Kidane, D., Krisnamurthy, M., Alonso, J.C., Graumann, P.L. BMC Mol. Biol. (2006) [Pubmed]
  4. Overexpression, purification, and characterization of the SbcCD protein from Escherichia coli. Connelly, J.C., de Leau, E.S., Okely, E.A., Leach, D.R. J. Biol. Chem. (1997) [Pubmed]
  5. Repair by recombination of DNA containing a palindromic sequence. Leach, D.R., Okely, E.A., Pinder, D.J. Mol. Microbiol. (1997) [Pubmed]
  6. Phage lambda has an analog of Escherichia coli recO, recR and recF genes. Sawitzke, J.A., Stahl, F.W. Genetics (1992) [Pubmed]
  7. Genes involved in the determination of the rate of inversions at short inverted repeats. Slupska, M.M., Chiang, J.H., Luther, W.M., Stewart, J.L., Amii, L., Conrad, A., Miller, J.H. Genes Cells (2000) [Pubmed]
  8. The SbcCD protein of Escherichia coli is related to two putative nucleases in the UvrA superfamily of nucleotide-binding proteins. Leach, D.R., Lloyd, R.G., Coulson, A.F. Genetica (1992) [Pubmed]
  9. Mapping, sequence, and apparent lack of function of araJ, a gene of the Escherichia coli arabinose regulon. Reeder, T., Schleif, R. J. Bacteriol. (1991) [Pubmed]
  10. Escherichia coli sbcC mutants permit stable propagation of DNA replicons containing a long palindrome. Chalker, A.F., Leach, D.R., Lloyd, R.G. Gene (1988) [Pubmed]
  11. Expression of the recA gene in recombination-deficient (rec-) strains of Escherichia coli. Chua, K.L., Mak, Y.K., Oliver, P. Biochimie (1993) [Pubmed]
 
WikiGenes - Universities