The world's first wiki where authorship really matters (Nature Genetics, 2008). Due credit and reputation for authors. Imagine a global collaborative knowledge base for original thoughts. Search thousands of articles and collaborate with scientists around the globe.

wikigene or wiki gene protein drug chemical gene disease author authorship tracking collaborative publishing evolutionary knowledge reputation system wiki2.0 global collaboration genes proteins drugs chemicals diseases compound
Hoffmann, R. A wiki for the life sciences where authorship matters. Nature Genetics (2008)
 
Gene Review

sfa  -  cold shock gene

Escherichia coli O157:H7 str. EDL933

 
 
Welcome! If you are familiar with the subject of this article, you can contribute to this open access knowledge base by deleting incorrect information, restructuring or completely rewriting any text. Read more.
 

Disease relevance of sfa

  • The Escherichia coli operons daa and sfa encode F1845 and S pili, respectively [1].
  • With the exception of small alterations in the sfa-coding region the genetic determinants for S fimbriae were identical in uropathogenic O6:K+ and meningitis O18:K1 and O83:K1 strains [2].
  • These results suggest that the hly, kps, sfa, and pap pathogenicity determinants may play a role in the evolution of enteric bacteria quite apart from, and perhaps with precedence over, their ability to cause disease [3].
 

High impact information on sfa

  • Deletion of this pathogenicity island (paill) not only removes the hly- and prf-specific genes, but also represses S fimbriae (Sfa), although the sfa genes of this virulence factor are not located on paill [4].
  • We also show that Lrp binds to the daa and sfa regulatory regions and that this binding is modulated by the methylation of the GATC sites [1].
  • Surprisingly, other fimbrial genes, such as pap and foc/sfa, and genes involved in motility and chemotaxis were downregulated in vivo [5].
  • The isolates within these virulent lineages typically carried DNA homologous to the adhesin operon pap or sfa and the hemolysin operon hly and expressed O1, O2, O4, O6, O18, O25, or O75 antigens [6].
  • Structure and copy number analyses of pap-, sfa-, and afa-related gene clusters in F165-positive bovine and porcine Escherichia coli isolates [7].
 

Chemical compound and disease context of sfa

  • Leucine-responsive regulatory protein and deoxyadenosine methylase control the phase variation and expression of the sfa and daa pili operons in Escherichia coli [1].
  • Probes from different segments of the pap, sfa, and afaI operons were used in Southern hybridization to analyze 18 F165-positive, mannose-resistant hemagglutinating E. coli isolates possessing pap- and sfa-, pap- and afa-, or pap-related sequences [7].
  • The multiplex PCR to detect pap, sfa, afaI, hly, aer and cnf1 genes was highly specific and the sensitivity was found to be about 5 x 10(3) colony forming units of E. coli per ml [8].
 

Biological context of sfa

  • Only one copy of the sfa determinant was identified on the chromosome of these strains [2].
  • By restriction analysis and by DNA-DNA hybridization, it could be shown that the cloned fimbrial determinant of strain BK658 exhibits a high degree of sequence homology to the gene clusters coding for S fimbrial adhesins (sfa) and F1C fimbriae (foc) [9].
  • The reintroduction of the cloned S fimbrial adhesin determinant (sfa) increases the virulence of the avirulent mutant strain by a factor of 20; almost the same effect was observed after restoration of serum resistance by integration of an sfa+ recombinant cosmid into the chromosome [10].
  • It is shown that the Sfa-negative phenotype is due to a block in transcription of the sfa genes [11].
  • In the biogenesis of S fimbriae, the proteins encoded by the sfa genes are presumably required in a specific stoichiometry [12].
 

Anatomical context of sfa

 

Associations of sfa with chemical compounds

  • However, the loss of the inserts not only affected the hemolytic phenotype but led to a considerable reduction in serum resistance and the loss of mannose-resistant hemagglutination, caused by the presence of S-type fimbriae (sfa) [11].
  • Virulence gene frequencies detected in those isolates which had been randomly collected (68 canine strains) were: 43% pap, 57% sfa, 1% afa, 44% hly, 41% cnf1 and 34% aer [16].
 

Other interactions of sfa

  • Comparison of the genetic determinant coding for the S-fimbrial adhesin (sfa) of Escherichia coli to other chromosomally encoded fimbrial determinants [17].
 

Analytical, diagnostic and therapeutic context of sfa

References

  1. Leucine-responsive regulatory protein and deoxyadenosine methylase control the phase variation and expression of the sfa and daa pili operons in Escherichia coli. van der Woude, M.W., Low, D.A. Mol. Microbiol. (1994) [Pubmed]
  2. Analysis of the genetic determinants coding for the S-fimbrial adhesin (sfa) in different Escherichia coli strains causing meningitis or urinary tract infections. Ott, M., Hacker, J., Schmoll, T., Jarchau, T., Korhonen, T.K., Goebel, W. Infect. Immun. (1986) [Pubmed]
  3. Chromosomal regions specific to pathogenic isolates of Escherichia coli have a phylogenetically clustered distribution. Boyd, E.F., Hartl, D.L. J. Bacteriol. (1998) [Pubmed]
  4. Adhesin regulatory genes within large, unstable DNA regions of pathogenic Escherichia coli: cross-talk between different adhesin gene clusters. Morschhäuser, J., Vetter, V., Emödy, L., Hacker, J. Mol. Microbiol. (1994) [Pubmed]
  5. Transcriptome of uropathogenic Escherichia coli during urinary tract infection. Snyder, J.A., Haugen, B.J., Buckles, E.L., Lockatell, C.V., Johnson, D.E., Donnenberg, M.S., Welch, R.A., Mobley, H.L. Infect. Immun. (2004) [Pubmed]
  6. Clonal relationships among bloodstream isolates of Escherichia coli. Maslow, J.N., Whittam, T.S., Gilks, C.F., Wilson, R.A., Mulligan, M.E., Adams, K.S., Arbeit, R.D. Infect. Immun. (1995) [Pubmed]
  7. Structure and copy number analyses of pap-, sfa-, and afa-related gene clusters in F165-positive bovine and porcine Escherichia coli isolates. Maiti, S.N., Harel, J., Fairbrother, J.M. Infect. Immun. (1993) [Pubmed]
  8. Detection of urovirulence factors in Escherichia coli by multiplex polymerase chain reaction. Yamamoto, S., Terai, A., Yuri, K., Kurazono, H., Takeda, Y., Yoshida, O. FEMS Immunol. Med. Microbiol. (1995) [Pubmed]
  9. Cloning and characterization of a new type of fimbria (S/F1C-related fimbria) expressed by an Escherichia coli O75:K1:H7 blood culture isolate. Pawelzik, M., Heesemann, J., Hacker, J., Opferkuch, W. Infect. Immun. (1988) [Pubmed]
  10. Contribution of cloned virulence factors from uropathogenic Escherichia coli strains to nephropathogenicity in an experimental rat pyelonephritis model. Marre, R., Hacker, J., Henkel, W., Goebel, W. Infect. Immun. (1986) [Pubmed]
  11. Large, unstable inserts in the chromosome affect virulence properties of uropathogenic Escherichia coli O6 strain 536. Knapp, S., Hacker, J., Jarchau, T., Goebel, W. J. Bacteriol. (1986) [Pubmed]
  12. Transcriptional analysis of the sfa determinant revealing mmRNA processing events in the biogenesis of S fimbriae in pathogenic Escherichia coli. Balsalobre, C., Morschhäuser, J., Jass, J., Hacker, J., Uhlin, B.E. J. Bacteriol. (2003) [Pubmed]
  13. Virulence factors associated with F165-positive Escherichia coli strains isolated from piglets and calves. Harel, J., Fairbrother, J., Forget, C., Desautels, C., Moore, J. Vet. Microbiol. (1993) [Pubmed]
  14. Phenotypic and genotypic assays for the detection and identification of adhesins from pyelonephritic Escherichia coli. Archambaud, M., Courcoux, P., Ouin, V., Chabanon, G., Labigne-Roussel, A. Ann. Inst. Pasteur Microbiol. (1988) [Pubmed]
  15. Distribution of uropathogenic virulence factors among Escherichia coli strains isolated from dogs and cats. Yuri, K., Nakata, K., Katae, H., Yamamoto, S., Hasegawa, A. J. Vet. Med. Sci. (1998) [Pubmed]
  16. Virulence genes and P fimbriae PapA subunit diversity in canine and feline uropathogenic Escherichia coli. Féria, C., Machado, J., Correia, J.D., Gonçalves, J., Gaastra, W. Vet. Microbiol. (2001) [Pubmed]
  17. Comparison of the genetic determinant coding for the S-fimbrial adhesin (sfa) of Escherichia coli to other chromosomally encoded fimbrial determinants. Ott, M., Schmoll, T., Goebel, W., Van Die, I., Hacker, J. Infect. Immun. (1987) [Pubmed]
  18. Rapid and specific detection of the pap, afa, and sfa adhesin-encoding operons in uropathogenic Escherichia coli strains by polymerase chain reaction. Le Bouguenec, C., Archambaud, M., Labigne, A. J. Clin. Microbiol. (1992) [Pubmed]
  19. Virulence patterns from septicemic Escherichia coli O78 strains. Babai, R., Blum-Oehler, G., Stern, B.E., Hacker, J., Ron, E.Z. FEMS Microbiol. Lett. (1997) [Pubmed]
  20. Analysis of the variability of S-fimbriae expression in an Escherichia coli pathogen. Ott, M., Hacker, J. FEMS Microbiol. Lett. (1991) [Pubmed]
 
WikiGenes - Universities