L. Aravind
National Center for Biotechnology Information
National Library of Medicine
National Institutes of Health
Bethesda
USA
Name/email consistency: high
- Ter-dependent stress response systems: novel pathways related to metal sensing, production of a nucleoside-like metabolite, and DNA-processing. Anantharaman, V., Iyer, L.M., Aravind, L. Mol. Biosyst (2012)
- Polymorphic toxin systems: Comprehensive characterization of trafficking modes, processing, mechanisms of action, immunity and ecology using comparative genomics. Zhang, D., de Souza, R.F., Anantharaman, V., Iyer, L.M., Aravind, L. Biol. Direct (2012)
- Identification of novel components of NAD-utilizing metabolic pathways and prediction of their biochemical functions. de Souza, R.F., Aravind, L. Mol. Biosyst (2012)
- Predicted class-I aminoacyl tRNA synthetase-like proteins in non-ribosomal peptide synthesis. Aravind, L., de Souza, R.F., Iyer, L.M. Biol. Direct (2010)
- Apprehending multicellularity: regulatory networks, genomics, and evolution. Aravind, L., Anantharaman, V., Venancio, T.M. Birth Defects Res. C Embryo Today (2009)
- Domain architectures of the Scm3p protein provide insights into centromere function and evolution. Aravind, L., Iyer, L.M., Wu, C. Cell. Cycle (2007)
- The many faces of the helix-turn-helix domain: transcription regulation and beyond. Aravind, L., Anantharaman, V., Balaji, S., Babu, M.M., Iyer, L.M. FEMS Microbiol. Rev. (2005)
- A novel family of P-loop NTPases with an unusual phyletic distribution and transmembrane segments inserted within the NTPase domain. Aravind, L., Iyer, L.M., Leipe, D.D., Koonin, E.V. Genome Biol. (2004)
- HutC/FarR-like bacterial transcription factors of the GntR family contain a small molecule-binding domain of the chorismate lyase fold. Aravind, L., Anantharaman, V. FEMS Microbiol. Lett. (2003)
- Provenance of SET-domain histone methyltransferases through duplication of a simple structural unit. Aravind, L., Iyer, L.M. Cell. Cycle (2003)
- The two faces of Alba: the evolutionary connection between proteins participating in chromatin structure and RNA metabolism. Aravind, L., Iyer, L.M., Anantharaman, V. Genome Biol. (2003)
- Evolutionary connections between bacterial and eukaryotic signaling systems: a genomic perspective. Aravind, L., Anantharaman, V., Iyer, L.M. Curr. Opin. Microbiol. (2003)
- Plasmodium biology: genomic gleanings. Aravind, L., Iyer, L.M., Wellems, T.E., Miller, L.H. Cell (2003)
- Classification of the caspase-hemoglobinase fold: detection of new families and implications for the origin of the eukaryotic separins. Aravind, L., Koonin, E.V. Proteins (2002)
- Extensive domain shuffling in transcription regulators of DNA viruses and implications for the origin of fungal APSES transcription factors. Iyer, L.M., Koonin, E.V., Aravind, L. Genome Biol. (2002)
- Monophyly of class I aminoacyl tRNA synthetase, USPA, ETFP, photolyase, and PP-ATPase nucleotide-binding domains: implications for protein evolution in the RNA. Aravind, L., Anantharaman, V., Koonin, E.V. Proteins (2002)
- Intraproteomic networks: new forays into predicting interaction partners. Aravind, L., Iyer, L.M. Genome Res. (2002)
- The SWIRM domain: a conserved module found in chromosomal proteins points to novel chromatin-modifying activities. Aravind, L., Iyer, L.M. Genome Biol. (2002)
- The DNA-repair protein AlkB, EGL-9, and leprecan define new families of 2-oxoglutarate- and iron-dependent dioxygenases. Aravind, L., Koonin, E.V. Genome Biol. (2001)
- THUMP--a predicted RNA-binding domain shared by 4-thiouridine, pseudouridine synthases and RNA methylases. Aravind, L., Koonin, E.V. Trends Biochem. Sci. (2001)
- The WWE domain: a common interaction module in protein ubiquitination and ADP ribosylation. Aravind, L. Trends Biochem. Sci. (2001)
- Prokaryotic homologs of the eukaryotic DNA-end-binding protein Ku, novel domains in the Ku protein and prediction of a prokaryotic double-strand break repair system. Aravind, L., Koonin, E.V. Genome Res. (2001)
- Guilt by association: contextual information in genome analysis. Aravind, L. Genome Res. (2000)
- Eukaryote-specific domains in translation initiation factors: implications for translation regulation and evolution of the translation system. Aravind, L., Koonin, E.V. Genome Res. (2000)
- The BED finger, a novel DNA-binding domain in chromatin-boundary-element-binding proteins and transposases. Aravind, L. Trends Biochem. Sci. (2000)
- SURVEY AND SUMMARY: holliday junction resolvases and related nucleases: identification of new families, phyletic distribution and evolutionary trajectories. Aravind, L., Makarova, K.S., Koonin, E.V. Nucleic Acids Res. (2000)
- The alpha/beta fold uracil DNA glycosylases: a common origin with diverse fates. Aravind, L., Koonin, E.V. Genome Biol. (2000)
- DNA polymerase beta-like nucleotidyltransferase superfamily: identification of three new families, classification and evolutionary history. Aravind, L., Koonin, E.V. Nucleic Acids Res. (1999)
- G-patch: a new conserved domain in eukaryotic RNA-processing proteins and type D retroviral polyproteins. Aravind, L., Koonin, E.V. Trends Biochem. Sci. (1999)
- Origin of multicellular eukaryotes - insights from proteome comparisons. Aravind, L., Subramanian, G. Curr. Opin. Genet. Dev. (1999)
- Fold prediction and evolutionary analysis of the POZ domain: structural and evolutionary relationship with the potassium channel tetramerization domain. Aravind, L., Koonin, E.V. J. Mol. Biol. (1999)
- The HORMA domain: a common structural denominator in mitotic checkpoints, chromosome synapsis and DNA repair. Aravind, L., Koonin, E.V. Trends Biochem. Sci. (1998)
- The HD domain defines a new superfamily of metal-dependent phosphohydrolases. Aravind, L., Koonin, E.V. Trends Biochem. Sci. (1998)
