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Gene Review

rpoB  -  DNA-directed RNA polymerase subunit beta

Escherichia coli O157:H7 str. EDL933

 
 
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Disease relevance of rpoB

  • Rifampicin resistant (Rifr mutations map in the rpoB gene encoding the beta subunit of Escherichia coli RNA polymerase [1].
  • Emergence of rifampin-resistant Rhodococcus equi with several types of mutations in the rpoB gene among AIDS patients in northern Thailand [2].
  • We have fused the rpoBC genes to the strong controllable promoter PL in phage lambda while deleting most of the intercistronic regulatory DNA and ribosomal protein genes upstream of rpoB [3].
  • Similar observations were made when these sequences were present in the prophage, indicating that the removal of DNA sequences up to 26 base pairs before rpoB does not affect post-transcriptional autogenous regulation of beta beta' synthesis [3].
 

High impact information on rpoB

  • Mutations in Escherichia coli rpoB or rpoC, selected for the ability to confer prototrophy on relA spoT strains, were found to affect transcription from rrn P1 promoters [4].
  • Effects of rifampicin resistant rpoB mutations on antitermination and interaction with nusA in Escherichia coli [1].
  • The thermosensitivity of the Escherichia coli dnaR130 mutant in initiation of DNA replication was suppressed by a spontaneous rifampin resistance mutation in rpoB, the gene for the beta subunit of RNA polymerase [5].
  • Two segments of the wild-type E. coli genome, one of which specifies a suppressor of dnaK mutations, and thus, possibly, a molecular chaperone, also provided protection when overexpressed, but wild-type rpoB did not [6].
  • Most of the mutations that occurred in H. pylori mutY mutants, as examined by rpoB sequence changes that confer rifampicin resistance, are GC to TA transversions [7].
 

Chemical compound and disease context of rpoB

 

Biological context of rpoB

  • The complete nucleotide sequence of the rpoB gene which encodes the beta subunit of S. aureus RNA polymerase has been determined [9].

References

  1. Effects of rifampicin resistant rpoB mutations on antitermination and interaction with nusA in Escherichia coli. Jin, D.J., Cashel, M., Friedman, D.I., Nakamura, Y., Walter, W.A., Gross, C.A. J. Mol. Biol. (1988) [Pubmed]
  2. Emergence of rifampin-resistant Rhodococcus equi with several types of mutations in the rpoB gene among AIDS patients in northern Thailand. Asoh, N., Watanabe, H., Fines-Guyon, M., Watanabe, K., Oishi, K., Kositsakulchai, W., Sanchai, T., Kunsuikmengrai, K., Kahintapong, S., Khantawa, B., Tharavichitkul, P., Sirisanthana, T., Nagatake, T. J. Clin. Microbiol. (2003) [Pubmed]
  3. Direct evidence for autogenous regulation of the Escherichia coli genes rpoBC in vivo. Meek, D.W., Hayward, R.S. Mol. Gen. Genet. (1986) [Pubmed]
  4. RNA polymerase mutants that destabilize RNA polymerase-promoter complexes alter NTP-sensing by rrn P1 promoters. Bartlett, M.S., Gaal, T., Ross, W., Gourse, R.L. J. Mol. Biol. (1998) [Pubmed]
  5. Suppression of thermosensitive initiation of DNA replication in a dnaR mutant of Escherichia coli by a rifampin resistance mutation in the rpoB gene. Sakakibara, Y. J. Bacteriol. (1995) [Pubmed]
  6. Genes that protect against the host-killing activity of the E3 protein of Bacillus subtilis bacteriophage SPO1. Wei, P., Stewart, C.R. J. Bacteriol. (1995) [Pubmed]
  7. Role of a MutY DNA glycosylase in combating oxidative DNA damage in Helicobacter pylori. Eutsey, R., Wang, G., Maier, R.J. DNA Repair (Amst.) (2007) [Pubmed]
  8. Mutagenicity of the cytidine analog zebularine in Escherichia coli. Lee, G., Wolff, E., Miller, J.H. DNA Repair (Amst.) (2004) [Pubmed]
  9. Nucleotide sequence of the Staphylococcus aureus RNA polymerase rpoB gene and comparison of its predicted amino acid sequence with those of other bacteria. Aboshkiwa, M., Rowland, G., Coleman, G. Biochim. Biophys. Acta (1995) [Pubmed]
 
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