The world's first wiki where authorship really matters (Nature Genetics, 2008). Due credit and reputation for authors. Imagine a global collaborative knowledge base for original thoughts. Search thousands of articles and collaborate with scientists around the globe.

wikigene or wiki gene protein drug chemical gene disease author authorship tracking collaborative publishing evolutionary knowledge reputation system wiki2.0 global collaboration genes proteins drugs chemicals diseases compound
Hoffmann, R. A wiki for the life sciences where authorship matters. Nature Genetics (2008)
 
MeSH Review

Psychrobacter

 
 
Welcome! If you are familiar with the subject of this article, you can contribute to this open access knowledge base by deleting incorrect information, restructuring or completely rewriting any text. Read more.
 

Disease relevance of Psychrobacter

 

High impact information on Psychrobacter

  • (type strain, strain ACAM 534) and Psychrobacter frigidicola sp. nov [3].
  • ORF3 has a predicted size of 21.4 kDa and 29% identity to triacylglycerol lipase of Psychrobacter immobilis [4].
  • However, using detailed phenotypic and chemotaxonomic characteristics and phylogenetic analysis based on their 16S rRNA gene sequences, strain CMS 39(T), the only strain from Group II, and strain CMS 56(T), a representative strain of Group III, were different from each other and from all recognized species of Psychrobacter [5].
  • Psychrobacter nivimaris sp. nov., a heterotrophic bacterium attached to organic particles isolated from the South Atlantic (Antarctica) [6].
  • Tolerance to 5% bile salts, nitrate reduction, citrate utilization, acid production from carbohydrates, alkaline phosphatase, acid phosphatase, C4 esterase, C14 lipase and valine arylamidase were found to differentiate strain 116 from Psychrobacter glacincola [7].
 

Chemical compound and disease context of Psychrobacter

  • NADP+-dependent glutamate dehydrogenase in the Antarctic psychrotolerant bacterium Psychrobacter sp. TAD1. Characterization, protein and DNA sequence, and relationship to other glutamate dehydrogenases [8].
  • These deep-sea strains were also discriminated from other known Psychrobacter species in phenotype, e.g. limited growth in the absence of NaCl (optimum at about 3% NaCl), positive urease activity, acid production from xylose and arabinose, and the presence of multiple fimbriae [9].
  • The Antarctic psychrotolerant bacterium Psychrobacter sp. TAD1 contains two distinct glutamate dehydrogenases (GDH), each specific for either NADP+ or NAD+ [8].
 

Gene context of Psychrobacter

  • Psychrobacter sp. TAD1 is a psychrotolerant bacterium from Antarctic frozen continental water that grows from 2 to 25 degrees C with optimal growth rate at 20 degrees C. The new isolate contains two glutamate dehydrogenases (GDH), differing in their cofactor specificities, subunit sizes and arrangements, and thermal properties [10].
  • Cloning, sequence and structural features of a lipase from the antarctic facultative psychrophile Psychrobacter immobilis B10 [11].
  • Corrigendum to "Cloning, sequence and structural features of a lipase from the antarctic facultative psychrophile Psychrobacter immobilis B10" [Biochim. Biophys. Acta 1171 (1993) 331-333] [12].
  • A lipase gene (lip1) from the facultative psychrophilic strain Psychrobacter immobilis B10 has been cloned and sequenced [11].

References

  1. Cloning and characterization of the gene encoding PspPI methyltransferase from the Antarctic psychrotroph Psychrobacter sp. strain TA137. Predicted interactions with DNA and organization of the variable region. Rina, M., Caufrier, F., Markaki, M., Mavromatis, K., Kokkinidis, M., Bouriotis, V. Gene (1997) [Pubmed]
  2. Cloning and sequence analysis of the estA gene encoding enzyme for producing (R)-beta-acetylmercaptoisobutyric acid from Pseudomonas aeruginosa 1001. Lee, J., Boyapati, G., Song, K., Rhee, S., Kim, C. J. Biosci. Bioeng. (2000) [Pubmed]
  3. Novel Psychrobacter species from Antarctic ornithogenic soils. Bowman, J.P., Cavanagh, J., Austin, J.J., Sanderson, K. Int. J. Syst. Bacteriol. (1996) [Pubmed]
  4. Structural organization of a Bacillus subtilis operon encoding menaquinone biosynthetic enzymes. Rowland, B., Hill, K., Miller, P., Driscoll, J., Taber, H. Gene (1995) [Pubmed]
  5. Psychrobacter vallis sp. nov. and Psychrobacter aquaticus sp. nov., from Antarctica. Shivaji, S., Reddy, G.S., Suresh, K., Gupta, P., Chintalapati, S., Schumann, P., Stackebrandt, E., Matsumoto, G.I. Int. J. Syst. Evol. Microbiol. (2005) [Pubmed]
  6. Psychrobacter nivimaris sp. nov., a heterotrophic bacterium attached to organic particles isolated from the South Atlantic (Antarctica). Heuchert, A., Glöckner, F.O., Amann, R., Fischer, U. Syst. Appl. Microbiol. (2004) [Pubmed]
  7. Psychrobacter proteolyticus sp. nov., a psychrotrophic, halotolerant bacterium isolated from the Antarctic krill Euphausia superba Dana, excreting a cold-adapted metalloprotease. Denner, E.B., Mark, B., Busse, H.J., Turkiewicz, M., Lubitz, W. Syst. Appl. Microbiol. (2001) [Pubmed]
  8. NADP+-dependent glutamate dehydrogenase in the Antarctic psychrotolerant bacterium Psychrobacter sp. TAD1. Characterization, protein and DNA sequence, and relationship to other glutamate dehydrogenases. Di Fraia, R., Wilquet, V., Ciardiello, M.A., Carratore, V., Antignani, A., Camardella, L., Glansdorff, N., Di Prisco, G. Eur. J. Biochem. (2000) [Pubmed]
  9. Phylogenetic analysis of psychrophilic bacteria isolated from the Japan Trench, including a description of the deep-sea species Psychrobacter pacificensis sp. nov. Maruyama, A., Honda, D., Yamamoto, H., Kitamura, K., Higashihara, T. Int. J. Syst. Evol. Microbiol. (2000) [Pubmed]
  10. The Antarctic Psychrobacter sp. TAD1 has two cold-active glutamate dehydrogenases with different cofactor specificities. Characterisation of the NAD+-dependent enzyme. Camardella, L., Di Fraia, R., Antignani, A., Ciardiello, M.A., di Prisco, G., Coleman, J.K., Buchon, L., Guespin, J., Russell, N.J. Comp. Biochem. Physiol., Part A Mol. Integr. Physiol. (2002) [Pubmed]
  11. Cloning, sequence and structural features of a lipase from the antarctic facultative psychrophile Psychrobacter immobilis B10. Arpigny, J.L., Feller, G., Gerday, C. Biochim. Biophys. Acta (1993) [Pubmed]
  12. Corrigendum to "Cloning, sequence and structural features of a lipase from the antarctic facultative psychrophile Psychrobacter immobilis B10" [Biochim. Biophys. Acta 1171 (1993) 331-333]. Arpigny, J.L., Feller, G., Gerday, C. Biochim. Biophys. Acta (1995) [Pubmed]
 
WikiGenes - Universities