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Gene Review

FTL_R0016  -  16S ribosomal RNA

Francisella tularensis subsp. holarctica LVS

 
 
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Disease relevance of 16S rRNA

 

High impact information on 16S rRNA

  • Determination of the sequence of the 16S rRNA gene amplified from the organism and comparison of the sequence to other sequences identified it as a strain of Francisella tularensis, whereas the specific serology was still negative [3].
  • The DNA was detected by multiplex PCR targeting the 16S rRNA gene and a 17-kDa lipoprotein gene of F. tularensis [4].
  • We report a case of tularemia in a common marmoset (Callithrix jacchus) diagnosed by determination of the isolate's 16S ribosomal RNA (rRNA) gene sequence [2].
  • We studied 10 different isolates of F. tularensis from varying hares, one isolate from an Ural owl (Strix uralensis), one vaccine strain, one strain of F. t. biovar japonica, and six isolates from a virulence study of F. tularensis, by biochemical tests and by hybridization experiments with probes complementary to 16S rRNA [5].
 

Analytical, diagnostic and therapeutic context of 16S rRNA

  • The initial survey used 16S rRNA gene primers to detect Francisella species and related organisms by PCR amplification of DNA extracts from environmental samples [6].

References

  1. Genotyping of Francisella tularensis strains by pulsed-field gel electrophoresis, amplified fragment length polymorphism fingerprinting, and 16S rRNA gene sequencing. García Del Blanco, N., Dobson, M.E., Vela, A.I., De La Puente, V.A., Gutiérrez, C.B., Hadfield, T.L., Kuhnert, P., Frey, J., Domínguez, L., Rodríguez Ferri, E.F. J. Clin. Microbiol. (2002) [Pubmed]
  2. Tularemia in a common marmoset (Callithrix jacchus) diagnosed by 16S rRNA sequencing. Posthaus, H., Welle, M., Mörner, T., Nicolet, J., Kuhnert, P. Vet. Microbiol. (1998) [Pubmed]
  3. Isolation of Francisella tularensis by centrifugation of shell vial cell culture from an inoculation eschar. Fournier, P.E., Bernabeu, L., Schubert, B., Mutillod, M., Roux, V., Raoult, D. J. Clin. Microbiol. (1998) [Pubmed]
  4. Detection of Francisella tularensis in ulcers of patients with tularemia by PCR. Sjöstedt, A., Eriksson, U., Berglund, L., Tärnvik, A. J. Clin. Microbiol. (1997) [Pubmed]
  5. Identification and classification of different isolates of Francisella tularensis. Mörner, T., Mattsson, R., Forsman, M., Johansson, K.E., Sandström, G. Zentralblatt Veterinarmedizin Reihe B (1993) [Pubmed]
  6. Detection of diverse new Francisella-like bacteria in environmental samples. Barns, S.M., Grow, C.C., Okinaka, R.T., Keim, P., Kuske, C.R. Appl. Environ. Microbiol. (2005) [Pubmed]
 
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