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Gene Review

BEAF-32  -  Boundary element-associated factor of 32kD

Drosophila melanogaster

Synonyms: BEAF, BEAF-32A, BEAF-32B, BEAF32, BEAF32A, ...
 
 
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Disease relevance of BEAF-32

 

High impact information on BEAF-32

  • Their palindromic binding sites (CGATA-TATCG) symmetrically abut the previously mapped hypersensitive site of scs'. We have cloned a cDNA for one of these proteins, BEAF-32 (boundary element-associated factor of 32 kDa) [2].
  • Immunostaining localizes BEAF to hundreds of interbands and many puff boundaries on polytene chromosomes, suggesting that a chromosomal domain consists of a band (or puff) and part of the flanking interbands [2].
  • We show that the Drosophila scs and scs' boundary proteins, Zw5 and BEAF, respectively, interact with each other in vitro and in vivo [3].
  • The Drosophila boundary protein BEAF and, unexpectedly, the mammalian factor Sp1 exhibited a robust BA in yeast [4].
  • Taken together, these findings suggest that clustered CGATA motifs are a hallmark of a BEAF-utilizing class of boundary elements found at many loci [5].
 

Biological context of BEAF-32

  • The boundary element-associated factor BEAF is one protein that is implicated in boundary element function [6].
  • This sequence contains a BEAF-binding sequence juxtaposed to an AT-rich sequence that harbors a strong nuclease-hypersensitive site [7].
  • DREF is believed to regulate genes whose products are involved in DNA replication and cell proliferation, suggesting that the activation of transcription predicted to result from the displacement of BEAF by DREF might be limited to certain rapidly proliferating tissues [6].
  • BEAF-32 is a protein present in the scs' element of Drosophila that is also localized to most interband regions and puffs of polytene chromosomes, suggesting a role in the organization of structural chromosomal domains [8].
  • Furthermore, point mutations in CGATA motifs that eliminate binding by BEAF also eliminate the ability to confer position-independent expression [5].
 

Anatomical context of BEAF-32

  • In the developing eye imaginal disc, expression of BEAF32A inhibited differentiation of photoreceptor cells [1].
  • Expression of BID in salivary glands leads to a global disruption of polytene chromatin structure, and this disruption is largely rescued by an extra copy of BEAF [9].
 

Other interactions of BEAF-32

  • To our knowledge, this is the first evidence for a genetic interaction between DREF and BEAF-32 [10].
  • We propose that the BE28 repeat clusters could fulfill a similar function, acting as a local boundary between hetero- and euchromatin in a process involving interactions between the BEAF and D1 proteins [7].
  • Four proteins have been identified in Drosophila mediating enhancer blocking-Su(Hw), Zw5, BEAF32 and GAGA factor [11].
 

Analytical, diagnostic and therapeutic context of BEAF-32

  • To investigate the effects of BEAF32A on regulation of chromatin structure, genetic crosses of the BEAF32A-overexpressing flies with loss-of-function mutants for genes encoding other boundary element-binding factors or regulators of chromatin structure were conducted [1].

References

  1. Ectopic expression of BEAF32A in the Drosophila eye imaginal disc inhibits differentiation of photoreceptor cells and induces apoptosis. Yamaguchi, M., Yoshida, H., Hirose, F., Inoue, Y.H., Hayashi, Y., Yamagishi, M., Nishi, Y., Tamai, K., Sakaguchi, K., Matsukage, A. Chromosoma (2001) [Pubmed]
  2. Visualization of chromosomal domains with boundary element-associated factor BEAF-32. Zhao, K., Hart, C.M., Laemmli, U.K. Cell (1995) [Pubmed]
  3. Protein:protein interactions and the pairing of boundary elements in vivo. Blanton, J., Gaszner, M., Schedl, P. Genes Dev. (2003) [Pubmed]
  4. Structural and dynamic functions establish chromatin domains. Ishii, K., Laemmli, U.K. Mol. Cell (2003) [Pubmed]
  5. Identification of a class of chromatin boundary elements. Cuvier, O., Hart, C.M., Laemmli, U.K. Mol. Cell. Biol. (1998) [Pubmed]
  6. Evidence for an antagonistic relationship between the boundary element-associated factor BEAF and the transcription factor DREF. Hart, C.M., Cuvier, O., Laemmli, U.K. Chromosoma (1999) [Pubmed]
  7. Identification of a multicopy chromatin boundary element at the borders of silenced chromosomal domains. Cuvier, O., Hart, C.M., Käs, E., Laemmli, U.K. Chromosoma (2002) [Pubmed]
  8. Boundary and insulator elements in chromosomes. Gerasimova, T.I., Corces, V.G. Curr. Opin. Genet. Dev. (1996) [Pubmed]
  9. The Drosophila boundary element-associated factors BEAF-32A and BEAF-32B affect chromatin structure. Gilbert, M.K., Tan, Y.Y., Hart, C.M. Genetics (2006) [Pubmed]
  10. Over-expression of DREF in the Drosophila wing imaginal disc induces apoptosis and a notching wing phenotype. Yoshida, H., Inoue, Y.H., Hirose, F., Sakaguchi, K., Matsukage, A., Yamaguchi, M. Genes Cells (2001) [Pubmed]
  11. CTCF is conserved from Drosophila to humans and confers enhancer blocking of the Fab-8 insulator. Moon, H., Filippova, G., Loukinov, D., Pugacheva, E., Chen, Q., Smith, S.T., Munhall, A., Grewe, B., Bartkuhn, M., Arnold, R., Burke, L.J., Renkawitz-Pohl, R., Ohlsson, R., Zhou, J., Renkawitz, R., Lobanenkov, V. EMBO Rep. (2005) [Pubmed]
 
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