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PKL  -  CHD3-type chromatin-remodeling factor PICKLE

Arabidopsis thaliana

Synonyms: AT2G25170.1, CHD3, CHD3 PROTEIN, CHR6, CKH2, ...
 
 
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High impact information on PKL/SSL2

  • As GYMNOS encodes a uniformly expressed homolog of the chromatin-remodeling protein, Mi2, we argue that the unique genetic interactions do not reflect a molecular redundancy [1].
  • Mutations in CRABS CLAW, the founding family member, display ectopic formation of adaxial carpel tissues only when the functions of other genes, such as GYMNOS or KANADI, are also compromised [1].
  • PKL is necessary for repression of LEC1, a gene implicated as a critical activator of embryo development [2].
  • Additional factors such as the CHD3 chromatin remodeling factor PICKLE (PKL) act to restrict meristematic activity in Arabidopsis leaves without repressing KNOX gene expression [3].
  • In contrast, we observed that PKL is required continuously after germination to repress expression of PHERES1, a type I MADS box gene that is normally expressed during early embryogenesis in wild-type plants [4].
 

Biological context of PKL/SSL2

  • A PKL:eGFP translational fusion is preferentially localized in the nucleus of cells, consistent with the proposed role for PKL as a chromatin remodeling factor [4].
  • Thus, PKL acts at multiple points during development to regulate patterns of gene expression in Arabidopsis [4].
  • In addition, genes known for their role in development, such as PICKLE/GYMNOS and PIE1, or in silencing, such as DDM1, turned out to also be involved in DNA damage response [5].
 

Associations of PKL/SSL2 with chemical compounds

 

Regulatory relationships of PKL/SSL2

  • The transcription factor ABI5 was consistently upregulated by both treatments and PKL was downregulated [7].
 

Analytical, diagnostic and therapeutic context of PKL/SSL2

  • A candidate gene approach and microarray analysis identified nine additional genes that exhibit PKL-dependent repression of expression during germination [8].

References

  1. Distinct mechanisms promote polarity establishment in carpels of Arabidopsis. Eshed, Y., Baum, S.F., Bowman, J.L. Cell (1999) [Pubmed]
  2. PICKLE is a CHD3 chromatin-remodeling factor that regulates the transition from embryonic to vegetative development in Arabidopsis. Ogas, J., Kaufmann, S., Henderson, J., Somerville, C. Proc. Natl. Acad. Sci. U.S.A. (1999) [Pubmed]
  3. The gibberellin pathway mediates KNOTTED1-type homeobox function in plants with different body plans. Hay, A., Kaur, H., Phillips, A., Hedden, P., Hake, S., Tsiantis, M. Curr. Biol. (2002) [Pubmed]
  4. PICKLE acts during germination to repress expression of embryonic traits. Li, H.C., Chuang, K., Henderson, J.T., Rider, S.D., Bai, Y., Zhang, H., Fountain, M., Gerber, J., Ogas, J. Plant J. (2005) [Pubmed]
  5. Involvement of the Arabidopsis SWI2/SNF2 chromatin remodeling gene family in DNA damage response and recombination. Shaked, H., Avivi-Ragolsky, N., Levy, A.A. Genetics (2006) [Pubmed]
  6. PICKLE is required for SOLITARY-ROOT/IAA14-mediated repression of ARF7 and ARF19 activity during Arabidopsis lateral root initiation. Fukaki, H., Taniguchi, N., Tasaka, M. Plant J. (2006) [Pubmed]
  7. Transcriptional profiling of imbibed Brassica napus seed. Li, F., Wu, X., Tsang, E., Cutler, A.J. Genomics (2005) [Pubmed]
  8. Coordinate repression of regulators of embryonic identity by PICKLE during germination in Arabidopsis. Dean Rider, S., Henderson, J.T., Jerome, R.E., Edenberg, H.J., Romero-Severson, J., Ogas, J. Plant J. (2003) [Pubmed]
 
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