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Hoffmann, R. A wiki for the life sciences where authorship matters. Nature Genetics (2008)
MeSH Review

Microarray Analysis

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Disease relevance of Microarray Analysis


High impact information on Microarray Analysis


Chemical compound and disease context of Microarray Analysis


Biological context of Microarray Analysis


Anatomical context of Microarray Analysis


Associations of Microarray Analysis with chemical compounds


Gene context of Microarray Analysis


Analytical, diagnostic and therapeutic context of Microarray Analysis


  1. Coordinated adenine nucleotide phosphohydrolysis and nucleoside signaling in posthypoxic endothelium: role of ectonucleotidases and adenosine A2B receptors. Eltzschig, H.K., Ibla, J.C., Furuta, G.T., Leonard, M.O., Jacobson, K.A., Enjyoji, K., Robson, S.C., Colgan, S.P. J. Exp. Med. (2003) [Pubmed]
  2. The Tangier disease gene product ABC1 controls the cellular apolipoprotein-mediated lipid removal pathway. Lawn, R.M., Wade, D.P., Garvin, M.R., Wang, X., Schwartz, K., Porter, J.G., Seilhamer, J.J., Vaughan, A.M., Oram, J.F. J. Clin. Invest. (1999) [Pubmed]
  3. Influence of in vivo growth on human glioma cell line gene expression: convergent profiles under orthotopic conditions. Camphausen, K., Purow, B., Sproull, M., Scott, T., Ozawa, T., Deen, D.F., Tofilon, P.J. Proc. Natl. Acad. Sci. U.S.A. (2005) [Pubmed]
  4. HemK, a class of protein methyl transferase with similarity to DNA methyl transferases, methylates polypeptide chain release factors, and hemK knockout induces defects in translational termination. Nakahigashi, K., Kubo, N., Narita, S., Shimaoka, T., Goto, S., Oshima, T., Mori, H., Maeda, M., Wada, C., Inokuchi, H. Proc. Natl. Acad. Sci. U.S.A. (2002) [Pubmed]
  5. Ectopic expression of interferon regulatory factor-1 promotes human breast cancer cell death and results in reduced expression of survivin. Pizzoferrato, E., Liu, Y., Gambotto, A., Armstrong, M.J., Stang, M.T., Gooding, W.E., Alber, S.M., Shand, S.H., Watkins, S.C., Storkus, W.J., Yim, J.H. Cancer Res. (2004) [Pubmed]
  6. Acetylation of H2AZ Lys 14 is associated with genome-wide gene activity in yeast. Millar, C.B., Xu, F., Zhang, K., Grunstein, M. Genes Dev. (2006) [Pubmed]
  7. Centronuclear myopathy in mice lacking a novel muscle-specific protein kinase transcriptionally regulated by MEF2. Nakagawa, O., Arnold, M., Nakagawa, M., Hamada, H., Shelton, J.M., Kusano, H., Harris, T.M., Childs, G., Campbell, K.P., Richardson, J.A., Nishino, I., Olson, E.N. Genes Dev. (2005) [Pubmed]
  8. Ehd1, a B-type response regulator in rice, confers short-day promotion of flowering and controls FT-like gene expression independently of Hd1. Doi, K., Izawa, T., Fuse, T., Yamanouchi, U., Kubo, T., Shimatani, Z., Yano, M., Yoshimura, A. Genes Dev. (2004) [Pubmed]
  9. Isolating human transcription factor targets by coupling chromatin immunoprecipitation and CpG island microarray analysis. Weinmann, A.S., Yan, P.S., Oberley, M.J., Huang, T.H., Farnham, P.J. Genes Dev. (2002) [Pubmed]
  10. Egr-2 and Egr-3 are negative regulators of T cell activation. Safford, M., Collins, S., Lutz, M.A., Allen, A., Huang, C.T., Kowalski, J., Blackford, A., Horton, M.R., Drake, C., Schwartz, R.H., Powell, J.D. Nat. Immunol. (2005) [Pubmed]
  11. Molecular regulation of tumor cell vasculogenic mimicry by tyrosine phosphorylation: role of epithelial cell kinase (Eck/EphA2). Hess, A.R., Seftor, E.A., Gardner, L.M., Carles-Kinch, K., Schneider, G.B., Seftor, R.E., Kinch, M.S., Hendrix, M.J. Cancer Res. (2001) [Pubmed]
  12. Microarray analysis in human hepatocytes suggests a mechanism for hepatotoxicity induced by trovafloxacin. Liguori, M.J., Anderson, M.G., Bukofzer, S., McKim, J., Pregenzer, J.F., Retief, J., Spear, B.B., Waring, J.F. Hepatology (2005) [Pubmed]
  13. Expression microarray analysis and oligo array comparative genomic hybridization of acquired gemcitabine resistance in mouse colon reveals selection for chromosomal aberrations. van de Wiel, M.A., Costa, J.L., Smid, K., Oudejans, C.B., Bergman, A.M., Meijer, G.A., Peters, G.J., Ylstra, B. Cancer Res. (2005) [Pubmed]
  14. RERG is a novel ras-related, estrogen-regulated and growth-inhibitory gene in breast cancer. Finlin, B.S., Gau, C.L., Murphy, G.A., Shao, H., Kimel, T., Seitz, R.S., Chiu, Y.F., Botstein, D., Brown, P.O., Der, C.J., Tamanoi, F., Andres, D.A., Perou, C.M. J. Biol. Chem. (2001) [Pubmed]
  15. Complement-dependent apoptosis and inflammatory gene changes in murine lupus cerebritis. Alexander, J.J., Jacob, A., Bao, L., Macdonald, R.L., Quigg, R.J. J. Immunol. (2005) [Pubmed]
  16. Identification of a cytokine-induced antiapoptotic molecule anamorsin essential for definitive hematopoiesis. Shibayama, H., Takai, E., Matsumura, I., Kouno, M., Morii, E., Kitamura, Y., Takeda, J., Kanakura, Y. J. Exp. Med. (2004) [Pubmed]
  17. Detecting activation of ribosomal protein S6 kinase by complementary DNA and tissue microarray analysis. Bärlund, M., Forozan, F., Kononen, J., Bubendorf, L., Chen, Y., Bittner, M.L., Torhorst, J., Haas, P., Bucher, C., Sauter, G., Kallioniemi, O.P., Kallioniemi, A. J. Natl. Cancer Inst. (2000) [Pubmed]
  18. Transcriptome profiling, molecular biological, and physiological studies reveal a major role for ethylene in cotton fiber cell elongation. Shi, Y.H., Zhu, S.W., Mao, X.Z., Feng, J.X., Qin, Y.M., Zhang, L., Cheng, J., Wei, L.P., Wang, Z.Y., Zhu, Y.X. Plant Cell (2006) [Pubmed]
  19. The phagosomal transporter A couples threonine acquisition to differentiation and replication of Legionella pneumophila in macrophages. Sauer, J.D., Bachman, M.A., Swanson, M.S. Proc. Natl. Acad. Sci. U.S.A. (2005) [Pubmed]
  20. The Ume6 regulon coordinates metabolic and meiotic gene expression in yeast. Williams, R.M., Primig, M., Washburn, B.K., Winzeler, E.A., Bellis, M., Sarrauste de Menthiere, C., Davis, R.W., Esposito, R.E. Proc. Natl. Acad. Sci. U.S.A. (2002) [Pubmed]
  21. Chitinase 3-like-1 exacerbates intestinal inflammation by enhancing bacterial adhesion and invasion in colonic epithelial cells. Mizoguchi, E. Gastroenterology (2006) [Pubmed]
  22. The ANGUSTIFOLIA gene of Arabidopsis, a plant CtBP gene, regulates leaf-cell expansion, the arrangement of cortical microtubules in leaf cells and expression of a gene involved in cell-wall formation. Kim, G.T., Shoda, K., Tsuge, T., Cho, K.H., Uchimiya, H., Yokoyama, R., Nishitani, K., Tsukaya, H. EMBO J. (2002) [Pubmed]
  23. Targeting c-Myc-activated genes with a correlation method: detection of global changes in large gene expression network dynamics. Remondini, D., O'Connell, B., Intrator, N., Sedivy, J.M., Neretti, N., Castellani, G.C., Cooper, L.N. Proc. Natl. Acad. Sci. U.S.A. (2005) [Pubmed]
  24. Genome-wide analysis of mRNA translation profiles in Saccharomyces cerevisiae. Arava, Y., Wang, Y., Storey, J.D., Liu, C.L., Brown, P.O., Herschlag, D. Proc. Natl. Acad. Sci. U.S.A. (2003) [Pubmed]
  25. Early genetic mechanisms underlying the inhibitory effects of endostatin and fumagillin on human endothelial cells. Mazzanti, C.M., Tandle, A., Lorang, D., Costouros, N., Roberts, D., Bevilacqua, G., Libutti, S.K. Genome Res. (2004) [Pubmed]
  26. Histone deacetylase inhibitors induce remission in transgenic models of therapy-resistant acute promyelocytic leukemia. He, L.Z., Tolentino, T., Grayson, P., Zhong, S., Warrell, R.P., Rifkind, R.A., Marks, P.A., Richon, V.M., Pandolfi, P.P. J. Clin. Invest. (2001) [Pubmed]
  27. Biosynthetic labeling of RNA with uracil phosphoribosyltransferase allows cell-specific microarray analysis of mRNA synthesis and decay. Cleary, M.D., Meiering, C.D., Jan, E., Guymon, R., Boothroyd, J.C. Nat. Biotechnol. (2005) [Pubmed]
  28. Dissection of the carbohydrate specificity of the broadly neutralizing anti-HIV-1 antibody 2G12. Calarese, D.A., Lee, H.K., Huang, C.Y., Best, M.D., Astronomo, R.D., Stanfield, R.L., Katinger, H., Burton, D.R., Wong, C.H., Wilson, I.A. Proc. Natl. Acad. Sci. U.S.A. (2005) [Pubmed]
  29. Camalexin is synthesized from indole-3-acetaldoxime, a key branching point between primary and secondary metabolism in Arabidopsis. Glawischnig, E., Hansen, B.G., Olsen, C.E., Halkier, B.A. Proc. Natl. Acad. Sci. U.S.A. (2004) [Pubmed]
  30. Negative regulation of NF-kappaB signaling by PIAS1. Liu, B., Yang, R., Wong, K.A., Getman, C., Stein, N., Teitell, M.A., Cheng, G., Wu, H., Shuai, K. Mol. Cell. Biol. (2005) [Pubmed]
  31. Distinct requirements for the naturally occurring splice forms Stat4alpha and Stat4beta in IL-12 responses. Hoey, T., Zhang, S., Schmidt, N., Yu, Q., Ramchandani, S., Xu, X., Naeger, L.K., Sun, Y.L., Kaplan, M.H. EMBO J. (2003) [Pubmed]
  32. Transforming growth factor beta-induced cell cycle arrest of human hematopoietic cells requires p57KIP2 up-regulation. Scandura, J.M., Boccuni, P., Massagué, J., Nimer, S.D. Proc. Natl. Acad. Sci. U.S.A. (2004) [Pubmed]
  33. Phosphorylated FADD induces NF-kappaB, perturbs cell cycle, and is associated with poor outcome in lung adenocarcinomas. Chen, G., Bhojani, M.S., Heaford, A.C., Chang, D.C., Laxman, B., Thomas, D.G., Griffin, L.B., Yu, J., Coppola, J.M., Giordano, T.J., Lin, L., Adams, D., Orringer, M.B., Ross, B.D., Beer, D.G., Rehemtulla, A. Proc. Natl. Acad. Sci. U.S.A. (2005) [Pubmed]
  34. Foxa2 is required for transition to air breathing at birth. Wan, H., Xu, Y., Ikegami, M., Stahlman, M.T., Kaestner, K.H., Ang, S.L., Whitsett, J.A. Proc. Natl. Acad. Sci. U.S.A. (2004) [Pubmed]
  35. The ErbB3-binding protein Ebp1 suppresses androgen receptor-mediated gene transcription and tumorigenesis of prostate cancer cells. Zhang, Y., Wang, X.W., Jelovac, D., Nakanishi, T., Yu, M.H., Akinmade, D., Goloubeva, O., Ross, D.D., Brodie, A., Hamburger, A.W. Proc. Natl. Acad. Sci. U.S.A. (2005) [Pubmed]
  36. Short-term administration of omega 3 fatty acids from fish oil results in increased transthyretin transcription in old rat hippocampus. Puskás, L.G., Kitajka, K., Nyakas, C., Barcelo-Coblijn, G., Farkas, T. Proc. Natl. Acad. Sci. U.S.A. (2003) [Pubmed]
  37. Dysregulation of the fibroblast growth factor system in major depression. Evans, S.J., Choudary, P.V., Neal, C.R., Li, J.Z., Vawter, M.P., Tomita, H., Lopez, J.F., Thompson, R.C., Meng, F., Stead, J.D., Walsh, D.M., Myers, R.M., Bunney, W.E., Watson, S.J., Jones, E.G., Akil, H. Proc. Natl. Acad. Sci. U.S.A. (2004) [Pubmed]
  38. Dazl binds in vivo to specific transcripts and can regulate the pre-meiotic translation of Mvh in germ cells. Reynolds, N., Collier, B., Maratou, K., Bingham, V., Speed, R.M., Taggart, M., Semple, C.A., Gray, N.K., Cooke, H.J. Hum. Mol. Genet. (2005) [Pubmed]
  39. Laser microdissection and microarray analysis of breast tumors reveal ER-alpha related genes and pathways. Yang, F., Foekens, J.A., Yu, J., Sieuwerts, A.M., Timmermans, M., Klijn, J.G., Atkins, D., Wang, Y., Jiang, Y. Oncogene (2006) [Pubmed]
  40. Early transcriptional effects of aldosterone in a mouse inner medullary collecting duct cell line. Gumz, M.L., Popp, M.P., Wingo, C.S., Cain, B.D. Am. J. Physiol. Renal Physiol. (2003) [Pubmed]
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