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Hoffmann, R. A wiki for the life sciences where authorship matters. Nature Genetics (2008)
 
 
 
 
 

Binding specificity and reactivity studies on a broad-specificity beta-glycosidase from porcine kidney.

A broad-specificity beta-glycosidase from porcine kidney was purified to homogeneity. Sodium dodecyl sulfate - polyacrylamide gel electrophoresis showed that it had a monomeric molecular weight of 55,000-60,000. Gel filtration showed native molecular weight of about 115,000. These data imply that the native enzyme is a dimer. The enzyme can catalyze the hydrolysis of beta bonds between glycosides and 4-methylumbelliferone or nitrophenol yielding D-fucopyranose, D-galactopyranose, D-glucopyranose, D-xylopyranose, and D-mannopyranose and of alpha bonds to yield L-arabinopyranose. This is the first study that shows a mammalian broad-specificity cytosolic beta-glycosidase carrying out a reaction with a beta-D-mannopyranoside. The nature of the broad specificity was studied with inhibitors. Similar inhibitor constants were found regardless of whether the substrate was a beta-D-glucopyranoside or a beta-D-galactopyranoside, so the enzyme probably has only one binding site with a broad specificity. The enzyme prefers to bind compounds with an axial hydroxyl at the 2 position and an equatorial hydroxyl at the 4 position; the 3 position does not affect binding significantly. The hydroxyl at the 6 position affects binding, but binding at that position depends on the configurations at the 2 and 4 positions. Thus, there must be some interactions between these three positions (2, 4, and 6). Lactones are also good inhibitors and this may relate to strain effects.[1]

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