The world's first wiki where authorship really matters (Nature Genetics, 2008). Due credit and reputation for authors. Imagine a global collaborative knowledge base for original thoughts. Search thousands of articles and collaborate with scientists around the globe.

wikigene or wiki gene protein drug chemical gene disease author authorship tracking collaborative publishing evolutionary knowledge reputation system wiki2.0 global collaboration genes proteins drugs chemicals diseases compound
Hoffmann, R. A wiki for the life sciences where authorship matters. Nature Genetics (2008)
 
Gene Review

FCA  -  flowering time control protein FCA

Arabidopsis thaliana

Synonyms: BETA, DELTA AND GAMMA, DL4180C, FCAALL.331, FLOWERING TIME CONTROL PROTEIN FCA ALPHA
 
 
Welcome! If you are familiar with the subject of this article, you can contribute to this open access knowledge base by deleting incorrect information, restructuring or completely rewriting any text. Read more.
 

High impact information on FCA

  • The FCA/FY interaction is also required for the downregulation of the floral repressor FLC [1].
  • The nuclear RNA binding protein, FCA, promotes Arabidopsis reproductive development [1].
  • The introduction of FCA intronless transgenes resulted in increased FCA protein levels and accelerated flowering, but no role in flowering was found for products of the shorter transcripts [2].
  • The phenotypes of the 3' end formation esp mutants include impaired termination of the transgene transcripts, early flowering, and enhanced silencing of the FCA-beta mRNA [3].
  • These pathways are represented by the genes CO, FCA, and GA1, which act in the long-day, autonomous, and gibberellin pathways, respectively [4].
 

Biological context of FCA

  • Here we show that FCA, an RNA-binding protein involved in flowering, binds ABA with high affinity in an interaction that is stereospecific and follows receptor kinetics [5].
  • The inclusion of FCA genomic sequence containing the alternatively processed intron 3 restricted the expression of the transgene predominantly to shoot and root apices and young flower buds [2].
  • Overexpression of AGL28 caused precocious flowering via the upregulation of the expression of FCA and LUMINIDEPENDENS (LD), both floral promoters within the autonomous pathway [6].
  • We report here its demonstration in a plant genome by reconstructing the physical map of a 1.9 Mbp region around the FCA locus of Arabidopsis thaliana [7].
  • Alternative splicing and expression analysis of OsFCA (FCA in Oryza sativa L.), a gene homologous to FCA in Arabidopsis [8].
 

Associations of FCA with chemical compounds

  • Our results indicate that FCA is an ABA receptor involved in RNA metabolism and in controlling flowering time [5].
  • The RNA-binding protein FCA is an abscisic acid receptor [5].
  • From an analysis of a collection of cDNA and genomic clones, we identified a superfamily of 23 genes encoding all 14 of the Arabidopsis proteasome subunits, designated PAA-PAG and PBA-PBG for Proteasome Alpha and Beta subunits A-G, respectively [9].
 

Regulatory relationships of FCA

  • FCA interacts with the 3'-end RNA-processing factor FY to autoregulate its own expression post-transcriptionally and to control FLC [10].
 

Other interactions of FCA

 

Analytical, diagnostic and therapeutic context of FCA

  • The fluorescence quantitative PCR analysis showed that the mRNA of OsFCA-1 is the most abundant in the four splicing variants of rice FCA, and its expression level is much higher in differentiating calli than in calli [8].

References

  1. FY is an RNA 3' end-processing factor that interacts with FCA to control the Arabidopsis floral transition. Simpson, G.G., Dijkwel, P.P., Quesada, V., Henderson, I., Dean, C. Cell (2003) [Pubmed]
  2. Functional significance of the alternative transcript processing of the Arabidopsis floral promoter FCA. Macknight, R., Duroux, M., Laurie, R., Dijkwel, P., Simpson, G., Dean, C. Plant Cell (2002) [Pubmed]
  3. Inaugural Article: Defective RNA processing enhances RNA silencing and influences flowering of Arabidopsis. Herr, A.J., Moln??r, A., Jones, A., Baulcombe, D.C. Proc. Natl. Acad. Sci. U.S.A. (2006) [Pubmed]
  4. Analysis of flowering time control in Arabidopsis by comparison of double and triple mutants. Reeves, P.H., Coupland, G. Plant Physiol. (2001) [Pubmed]
  5. The RNA-binding protein FCA is an abscisic acid receptor. Razem, F.A., El-Kereamy, A., Abrams, S.R., Hill, R.D. Nature (2006) [Pubmed]
  6. Overexpression of AGAMOUS-LIKE 28 (AGL28) promotes flowering by upregulating expression of floral promoters within the autonomous pathway. Yoo, S.K., Lee, J.S., Ahn, J.H. Biochem. Biophys. Res. Commun. (2006) [Pubmed]
  7. HAPPY mapping in a plant genome: reconstruction and analysis of a high-resolution physical map of a 1.9 Mbp region of Arabidopsis thaliana chromosome 4. Thangavelu, M., James, A.B., Bankier, A., Bryan, G.J., Dear, P.H., Waugh, R. Plant Biotechnol. J. (2003) [Pubmed]
  8. Alternative splicing and expression analysis of OsFCA (FCA in Oryza sativa L.), a gene homologous to FCA in Arabidopsis. Du, X., Qian, X., Wang, D., Yang, J. DNA Seq. (2006) [Pubmed]
  9. Molecular organization of the 20S proteasome gene family from Arabidopsis thaliana. Fu, H., Doelling, J.H., Arendt, C.S., Hochstrasser, M., Vierstra, R.D. Genetics (1998) [Pubmed]
  10. RNA processing and Arabidopsis flowering time control. Simpson, G.G., Quesada, V., Henderson, I.R., Dijkwel, P.P., Macknight, R., Dean, C. Biochem. Soc. Trans. (2004) [Pubmed]
  11. OsFY, a homolog of AtFY, encodes a protein that can interact with OsFCA-gamma in rice (Oryza sativa L.). Lu, Q., Xu, Z.K., Song, R.T. Acta Biochim. Biophys. Sin. (Shanghai) (2006) [Pubmed]
 
WikiGenes - Universities