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CCDC34  -  coiled-coil domain containing 34

Homo sapiens

Synonyms: Coiled-coil domain-containing protein 34, L15, NY-REN-41, RAMA3, Renal carcinoma antigen NY-REN-41
 
 
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Disease relevance of CCDC34

  • Footprinting of L15 was done by reconstituting purified, recombinant L15 with core particles derived from Escherichia coli 50 S subunits by treatment with 2 M LiCl [1].
  • The species identified from the mixed cultures during bioleaching of pyrite, arsenical pyrite, and chalcopyrite were clones closely related to Acidithiobacillus caldus C-SH12, Sulfobacillus thermosulfidooxidans AT-1, " Sulfobacillus montserratensis" L15, and an uncultured thermal soil bacterium YNP [2].
 

High impact information on CCDC34

  • We have probed the interaction L15 with 23 S rRNA in 50 S ribosomal subunits by chemical footprinting, and have used localized hydroxyl radical probing, generated from Fe(II) tethered to unique sites of L15, to characterize the three-dimensional 23 S rRNA environment of L15 [1].
  • Using both Fe(II).EDTA and dimethyl sulfate, we have identified a strong footprint for L15 in the region spanning nucleotides 572-654 in domain II of 23 S rRNA [1].
  • This footprint cannot be detected when L15 is incubated with "naked" 23 S rRNA, indicating that formation of the L15 binding site requires a partially assembled particle.Protein-tethered hydroxyl radical probing was done using mutants of L15 containing single cysteine residues at amino acid positions 68, 71 and 115 [1].
  • The cores migrate as compact 50 S-like particles in sucrose gradients, contain 23 S and 5 S rRNA, and lack a subset of the 50 S proteins, including L15 [1].
  • The results of light microscopy, MTT test and cell cycle analysis showed that Schwann cells cultured in the silk fibroin extract fluid showed no significant difference in their morphology, cell viability and proliferation as compared to that in plain L15 medium [3].
 

Anatomical context of CCDC34

  • In the current study we aimed to evaluate the general morphology, viability, and distribution of human melanocytes in a system that uses Leibovitz L15 medium at room temperature [4].
  • The rainbow trout (Oncorhynchus mykiss) operculum was cultured in 12-well dishes containing sterile Leibovitz 15 (L-15) supplemented with glutamine medium during 24h at 9 degrees C, and the effect of copper, a toxic agent, and/or cortisol, an endogenous agent, on the epithelial cells was analyzed using light microscopy techniques [5].
 

Analytical, diagnostic and therapeutic context of CCDC34

  • Alternative model to human skin organ culture: a preliminary study with Leibovitz L15 medium [4].

References

  1. Ribosomal protein L15 as a probe of 50 S ribosomal subunit structure. Lieberman, K.R., Noller, H.F. J. Mol. Biol. (1998) [Pubmed]
  2. Analysis of community composition during moderately thermophilic bioleaching of pyrite, arsenical pyrite, and chalcopyrite. Dopson, M., Lindström, E.B. Microb. Ecol. (2004) [Pubmed]
  3. Biocompatibility evaluation of silk fibroin with peripheral nerve tissues and cells in vitro. Yang, Y., Chen, X., Ding, F., Zhang, P., Liu, J., Gu, X. Biomaterials (2007) [Pubmed]
  4. Alternative model to human skin organ culture: a preliminary study with Leibovitz L15 medium. de Jesus Ribeiro, C., Ohara, M.T., Gama, P. Microsc. Res. Tech. (2005) [Pubmed]
  5. Opercular epithelial cells: A simple approach for in vitro studies of cellular responses in fish. Mazon, A.d.e. .F., Nolan, D.T., Lock, R.A., Wendelaar Bonga, S.E., Fernandes, M.N. Toxicology (2007) [Pubmed]
 
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