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Gene Review

chiA  -  secreted endochitinase

Escherichia coli CFT073

 
 
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Disease relevance of chiA

 

High impact information on chiA

  • The gene cluster consisted of three different open reading frames organized in the order chiD, cbp1, and chiA [5].
  • The region upstream of chiA included a conserved -35 hexamer flanked by two direct repeats analogous to those found in many Streptomyces chitinase promoters, and thought to function as binding sequences for regulatory proteins [6].
  • The gene ensemble consists of 4CL-2 (4-coumarate:CoA ligase) and FSI (flavone synthase I) from parsley, chsA (chalcone synthase) and chiA (chalcone isomerase) from Petunia hybrida, and OMT1A (7-O-methyltransferase) from peppermint [7].
  • A protein purification procedure was developed to efficiently and effectively purify the target enzyme, chitinase A1 of Bacillus circulans WL-12, from Escherichia coli DH5alpha carrying the chiA gene with its natural promoter in the plasmid pNTU110 [8].
  • The chitinase gene product showed amino-acid sequence similarity to chiA from A. caviae [9].
 

Biological context of chiA

  • A gene cluster involved in the chitinolytic system of the strain was cloned and sequenced upstream of and including the chiA gene [5].
  • Primer-extension analysis confirmed that the transcription of this operon starts upstream of chiA [10].
  • The nucleotide sequence of the chiA gene from Serratia marcescens strain BJL200 was determined [11].
  • A protein that binds specifically to the promoter region of chiA was purified from the cell lysate of Streptomyces lividans by using an affinity purification method [12].
  • Chitinbiose was produced at more than 4 g L-1 by a high cell density culture of an Escherichia coli strain that co-expressed the rhizobial chitinoligosaccharide synthase gene nodC and a truncated form of the chitinase gene chiA which has been designed to be functionally produced in the E. coli cytoplasm [13].
 

Anatomical context of chiA

 

Associations of chiA with chemical compounds

  • The gene-specific PCR primers were used to detect the presence of the chiA gene in strain C4 [14].
 

Other interactions of chiA

 

Analytical, diagnostic and therapeutic context of chiA

References

  1. A unique chitinase with dual active sites and triple substrate binding sites from the hyperthermophilic archaeon Pyrococcus kodakaraensis KOD1. Tanaka, T., Fujiwara, S., Nishikori, S., Fukui, T., Takagi, M., Imanaka, T. Appl. Environ. Microbiol. (1999) [Pubmed]
  2. Cloning and primary structure of the chiA gene from Aeromonas caviae. Sitrit, Y., Vorgias, C.E., Chet, I., Oppenheim, A.B. J. Bacteriol. (1995) [Pubmed]
  3. Characterization and phylogeny of the pfp gene of Amycolatopsis methanolica encoding PPi-dependent phosphofructokinase. Alves, A.M., Meijer, W.G., Vrijbloed, J.W., Dijkhuizen, L. J. Bacteriol. (1996) [Pubmed]
  4. Cloning, expression, and characterization of a highly thermostable family 18 chitinase from Rhodothermus marinus. Hobel, C.F., Hreggvidsson, G.O., Marteinsson, V.T., Bahrani-Mougeot, F., Einarsson, J.M., Kristjánsson, J.K. Extremophiles (2005) [Pubmed]
  5. Identification and characterization of the gene cluster involved in chitin degradation in a marine bacterium, Alteromonas sp. strain O-7. Tsujibo, H., Orikoshi, H., Baba, N., Miyahara, M., Miyamoto, K., Yasuda, M., Inamori, Y. Appl. Environ. Microbiol. (2002) [Pubmed]
  6. Biochemical and genetic characterization of ChiA, the major enzyme component for the solubilization of chitin by Cellulomonas uda. Reguera, G., Leschine, S.B. Arch. Microbiol. (2003) [Pubmed]
  7. Expression of a soluble flavone synthase allows the biosynthesis of phytoestrogen derivatives in Escherichia coli. Leonard, E., Chemler, J., Lim, K.H., Koffas, M.A. Appl. Microbiol. Biotechnol. (2006) [Pubmed]
  8. Two-step purification of Bacillus circulans chitinase A1 expressed in Escherichia coli periplasm. Chen, C.T., Huang, C.J., Wang, Y.H., Chen, C.Y. Protein Expr. Purif. (2004) [Pubmed]
  9. Cloning, DNA sequence, and expression of Aeromonas caviae WS7b chitinase gene. Malik, A., Wenuganen, S., Suwanto, A., Tjahjono, B. Mol. Biotechnol. (2003) [Pubmed]
  10. Sequencing, expression, and transcription analysis of the Clostridium paraputrificum chiA gene encoding chitinase ChiA. Morimoto, K., Karita, S., Kimura, T., Sakka, K., Ohmiya, K. Appl. Microbiol. Biotechnol. (1999) [Pubmed]
  11. Characterization of a chitinase gene (chiA) from Serratia marcescens BJL200 and one-step purification of the gene product. Brurberg, M.B., Eijsink, V.G., Nes, I.F. FEMS Microbiol. Lett. (1994) [Pubmed]
  12. DNA-binding protein involved in the regulation of chitinase production in Streptomyces lividans. Fujii, T., Miyashita, K., Ohtomo, R., Saito, A. Biosci. Biotechnol. Biochem. (2005) [Pubmed]
  13. Genetic engineering of Escherichia coli for the production of NI,NII-diacetylchitobiose (chitinbiose) and its utilization as a primer for the synthesis of complex carbohydrates. Cottaz, S., Samain, E. Metab. Eng. (2005) [Pubmed]
  14. Cloning and Expression of a Chitinase Gene from Sanguibacter sp. C4. Tao, Y., Jin, H., Long, Z.F., Zhang, L., Ding, X.Q., Tao, K., Liu, S.G. Yi Chuan Xue Bao (2006) [Pubmed]
  15. Cloning and characterization of a chitinase-encoding gene (chiA) from Aspergillus nidulans, disruption of which decreases germination frequency and hyphal growth. Takaya, N., Yamazaki, D., Horiuchi, H., Ohta, A., Takagi, M. Biosci. Biotechnol. Biochem. (1998) [Pubmed]
  16. The roles of the C-terminal domain and type III domains of chitinase A1 from Bacillus circulans WL-12 in chitin degradation. Watanabe, T., Ito, Y., Yamada, T., Hashimoto, M., Sekine, S., Tanaka, H. J. Bacteriol. (1994) [Pubmed]
 
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