The world's first wiki where authorship really matters (Nature Genetics, 2008). Due credit and reputation for authors. Imagine a global collaborative knowledge base for original thoughts. Search thousands of articles and collaborate with scientists around the globe.

wikigene or wiki gene protein drug chemical gene disease author authorship tracking collaborative publishing evolutionary knowledge reputation system wiki2.0 global collaboration genes proteins drugs chemicals diseases compound
Hoffmann, R. A wiki for the life sciences where authorship matters. Nature Genetics (2008)
 

Links

 

Gene Review

SMI1  -  Smi1p

Saccharomyces cerevisiae S288c

Synonyms: Cell wall assembly regulator SMI1, G8553, KNR4, KTR4, Killer toxin-resistance protein 4, ...
 
 
Welcome! If you are familiar with the subject of this article, you can contribute to this open access knowledge base by deleting incorrect information, restructuring or completely rewriting any text. Read more.
 

High impact information on SMI1

  • We cloned and sequenced the SMI1 gene, which encodes a 57-kDa polypeptide with evolutionarily conserved epitope(s) found in mammalian cell nuclei [1].
  • Another mutant (smi1) exhibited a rare phenotype at the nonpermissive condition, which included S phase and budding arrest [1].
  • Disruption of the KNR4 locus does not result in cell death; however, it leads to reduced levels of both (1,3)-beta-glucan synthase activity and (1,3)-beta-glucan content in the cell wall [2].
  • In this paper, we demonstrate by two-hybrid, in vitro immunoprecipitation and tandem affinity purification (TAP) methods that Knr4p physically interacts with Slt2p [3].
  • KNR4, a suppressor of Saccharomyces cerevisiae cwh mutants, is involved in the transcriptional control of chitin synthase genes [4].
 

Biological context of SMI1

  • The KNR4 gene, originally isolated by complementation of a K9 killer-toxin-resistant mutant displaying reduced levels of both 1,3-beta-glucan and 1,3-beta-glucan synthase activity, was recloned from a YCp50 genomic library as a suppressor of Saccharomyces cerevisiae calcofluor-white-hypersensitive (cwh) mutants [4].
  • In addition, it is shown that the efficiency of spores formation was drastically reduced in diploid cells homozygous for the disruption of KNR4 or for a temperature-sensitive mutation of TYS1, although this effect could be independent of their protein interaction [5].
  • Moreover, the replacement of the two in vivo phosphorylated Ser(200) and Ser(203) by alanines led to a mutated protein with reduced protein interactions and a weaker complementation ability towards knr4 null mutant phenotypes [6].
  • These results together with previous data from genome scale two-hybrid and synthetic interaction screens support the notion that Knr4 is a regulatory protein that participates in the coordination of cell wall synthesis with bud emergence, and that this function may be modulated by phosphorylation of this protein [6].
  • Furthermore, the cell wall biogenesis protein KNR4 which physically interacts with TyrRS and cooperates in beta-1,3 glucan biosynthesis falls into a single gene cluster with TyrRS [7].
 

Anatomical context of SMI1

 

Associations of SMI1 with chemical compounds

  • In these mutants, which were characterized by increased chitin levels, the suppressor effect of KNR4 resulted, for some of them, in a lowering of polymer content to close to wild-type level, with no effect on the contents of beta-glucan and mannan [4].
  • Interaction of Knr4 protein, a protein involved in cell wall synthesis, with tyrosine tRNA synthetase encoded by TYS1 in Saccharomyces cerevisiae [5].
  • In exponentially growing cells on glucose, Knr4 appeared to be present in a protein complex that migrates with an apparent Mw superior to 250 kDa [6].
 

Other interactions of SMI1

  • Overexpression of either of the two genes in a wild-type strain led to increased resistance to wall-affecting drugs, while this effect was not obtained in a bck2 Delta mutant that overexpressed KNR4 [8].

References

  1. Yeast calmodulin and a conserved nuclear protein participate in the in vivo binding of a matrix association region. Fishel, B.R., Sperry, A.O., Garrard, W.T. Proc. Natl. Acad. Sci. U.S.A. (1993) [Pubmed]
  2. Cloning and characterization of KNR4, a yeast gene involved in (1,3)-beta-glucan synthesis. Hong, Z., Mann, P., Brown, N.H., Tran, L.E., Shaw, K.J., Hare, R.S., DiDomenico, B. Mol. Cell. Biol. (1994) [Pubmed]
  3. The interaction of Slt2 MAP kinase with Knr4 is necessary for signalling through the cell wall integrity pathway in Saccharomyces cerevisiae. Martin-Yken, H., Dagkessamanskaia, A., Basmaji, F., Lagorce, A., Francois, J. Mol. Microbiol. (2003) [Pubmed]
  4. KNR4, a suppressor of Saccharomyces cerevisiae cwh mutants, is involved in the transcriptional control of chitin synthase genes. Martin, H., Dagkessamanskaia, A., Satchanska, G., Dallies, N., François, J. Microbiology (Reading, Engl.) (1999) [Pubmed]
  5. Interaction of Knr4 protein, a protein involved in cell wall synthesis, with tyrosine tRNA synthetase encoded by TYS1 in Saccharomyces cerevisiae. Dagkessamanskaia, A., Martin-Yken, H., Basmaji, F., Briza, P., Francois, J. FEMS Microbiol. Lett. (2001) [Pubmed]
  6. The 'interactome' of the Knr4/Smi1, a protein implicated in coordinating cell wall synthesis with bud emergence in Saccharomyces cerevisiae. Basmaji, F., Martin-Yken, H., Durand, F., Dagkessamanskaia, A., Pichereaux, C., Rossignol, M., Francois, J. Mol. Genet. Genomics (2006) [Pubmed]
  7. Bioinformatic analysis of changes in expression level of tyrosyl-tRNA synthetase during sporulation process in Saccharomyces cerevisiae. Ivakhno, S.S., Kornelyuk, A.I. Mikrobiol. Z. (2005) [Pubmed]
  8. KNR4 is a member of the PKC1 signalling pathway and genetically interacts with BCK2, a gene involved in cell cycle progression in Saccharomyces cerevisiae. Martin-Yken, H., Dagkessamanskaia, A., Talibi, D., Francois, J. Curr. Genet. (2002) [Pubmed]
 
WikiGenes - Universities