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Gene Review

gltB  -  glutamate synthase, large subunit

Escherichia coli str. K-12 substr. MG1655

Synonyms: ECK3202, JW3179, aspB, ossB, psiQ
 
 
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Disease relevance of gltB

 

High impact information on gltB

  • The organization of the gltBD region of A. brasilense differs from that of the corresponding region in E. coli: in A. brasilense, gltD is upstream relative to gltB, and its stop codon is separated by 141 bp from the first ATG of gltB [5].
  • First, insertions in gltB, gltD or gltF all prevent Ntr induction [6].
  • Thus, we conclude that gltB or gltD mutants grow slowly on many poor nitrogen sources because they are starved for glutamate [7].
  • The argument that accumulated glutamine represses the Ntr system in gltB or gltD mutants is also incorrect, because these mutants can derepress the Ntr system normally so long as sufficient glutamate is supplied [7].
  • A cosmid containing the gltBD region was isolated from a T. ferrooxidans cosmid gene bank, but was unable to complement an E. coli gltB mutant [8].
 

Biological context of gltB

  • Subcloning and nucleotide sequencing of approximately 1,206 bp of DNA encompassing the gltBDF regulatory region showed that the mutations affected the first base at each of the two identical Shine-Dalgarno sequences, SD1 and SD2, located 40 and 8 bases, respectively, upstream from the putative gltB open reading frame [9].
  • The results suggest that SD2 is the preferred functional site at which ribosomes initiate gltB mRNA translation [9].
  • The other model postulated that mutations in gltB or gltD (which encode the subunits of GOGAT) were polar on a downstream gene, gltF, which is necessary for proper activation of gene expression by the Ntr system [7].
  • Two open reading frames of 4548 and 1446 base pairs (bp) were identified within the fragment as the structural genes for the alpha and beta subunits (gltB and gltD, respectively) of A. brasilense GltS [5].
  • Plasmid subclones of recombinant phage lambda Asm152 were able to complement both Escherichia coli gltB and A. sesbaniae Asm- Vi mutants; NADPH-glutamate synthase activity was detected in all such strains complemented to Asm+ [10].
 

Associations of gltB with chemical compounds

  • During the course of this study we found that the reported position of the locus (gltB) for glutamate synthase is incorrect [1].
  • Because the remaining five A. sesbaniae Asm- mutants mapped to a 1.5-kbp region adjacent to gltA+, these mutants probably define a single gltB+ gene (glutamate dehydrogenase NADPH-dependent L-glutamate synthase subunit); this region did not exhibit homology with the B. subtilis gltB+ gene [10].
  • Both the inhibition of growth and the massive accumulation of phosphatidic acid which occur in a cds-8 mutant at pH 8 were suppressed by mutations at a second locus, designated cdsS, which mapped between argG and gltB near min 68 [11].
 

Other interactions of gltB

References

  1. gltB gene and regulation of nitrogen metabolism by glutamine synthetase in Escherichia coli. Pahel, G., Zelenetz, A.D., Tyler, B.M. J. Bacteriol. (1978) [Pubmed]
  2. Glutamate synthase: identification of the NADPH-binding site by site-directed mutagenesis. Morandi, P., Valzasina, B., Colombo, C., Curti, B., Vanoni, M.A. Biochemistry (2000) [Pubmed]
  3. Positive regulation of glutamate biosynthesis in Bacillus subtilis. Bohannon, D.E., Sonenshein, A.L. J. Bacteriol. (1989) [Pubmed]
  4. Stress-response sigma factor sigma(H) directs expression of the gltB gene encoding glutamate synthase in Streptomyces coelicolor A3(2). Kormanec, J., Sevcikova, B. Biochim. Biophys. Acta (2002) [Pubmed]
  5. Glutamate synthase genes of the diazotroph Azospirillum brasilense. Cloning, sequencing, and analysis of functional domains. Pelanda, R., Vanoni, M.A., Perego, M., Piubelli, L., Galizzi, A., Curti, B., Zanetti, G. J. Biol. Chem. (1993) [Pubmed]
  6. gltF, a member of the gltBDF operon of Escherichia coli, is involved in nitrogen-regulated gene expression. Castaño, I., Flores, N., Valle, F., Covarrubias, A.A., Bolivar, F. Mol. Microbiol. (1992) [Pubmed]
  7. Roles of glutamate synthase, gltBD, and gltF in nitrogen metabolism of Escherichia coli and Klebsiella aerogenes. Goss, T.J., Perez-Matos, A., Bender, R.A. J. Bacteriol. (2001) [Pubmed]
  8. Cloning and sequencing of the gene for the Thiobacillus ferrooxidans ATCC33020 glutamate synthase (GOGAT) small subunit and complementation of an Escherichia coli gltD mutant. Deane, S.M., Rawlings, D.E. Gene (1996) [Pubmed]
  9. Mutations affecting the Shine-Dalgarno sequences of the untranslated region of the Escherichia coli gltBDF operon. Velázquez, L., Camarena, L., Reyes, J.L., Bastarrachea, F. J. Bacteriol. (1991) [Pubmed]
  10. Characterization of the Azorhizobium sesbaniae ORS571 genomic locus encoding NADPH-glutamate synthase. Donald, R.G., Lapointe, J., Ludwig, R.A. J. Bacteriol. (1988) [Pubmed]
  11. pH-sensitive CDP-diglyceride synthetase mutants of Escherichia coli: phenotypic suppression by mutations at a second site. Ganong, B.R., Raetz, C.R. J. Bacteriol. (1983) [Pubmed]
 
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