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Hoffmann, R. A wiki for the life sciences where authorship matters. Nature Genetics (2008)
 
MeSH Review

Euplotes

 
 
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High impact information on Euplotes

  • In the ciliate Euplotes crassus, however, telomerase RNP structure and substrate recognition are altered during macronuclear development to facilitate de novo telomere addition [1].
  • Developmentally programmed gene elimination in Euplotes crassus facilitates a switch in the telomerase catalytic subunit [1].
  • Here we show that the cross-link of the Euplotes-human hybrid eRF1 is restricted to mRNAs containing UAG and UAA codons, and that the entire N-terminal domain of Euplotes eRF1 is involved in discriminating against UGA and UGG [2].
  • Immunoprecipitation of 35S-labeled soluble Euplotes proteins with PCNA/cyclin autoimmune sera revealed a spectrum of low molecular mass proteins [3].
  • Human autoimmune sera specific for proliferating cell nuclear antigen (PCNA)/cyclin (auxiliary protein for DNA polymerase delta) demonstrated the presence of epitopes within the macro- and micronuclei of the hypotrichous ciliated protozoa Euplotes eurystomus [3].
 

Biological context of Euplotes

 

Anatomical context of Euplotes

  • Southern hybridization analyses indicated that a single DNA molecule of 630 bp encoding tRNACys exists in the macronucleus of Euplotes octocarinatus . Cloning and sequencing of this fragment revealed that it contains only one copy of a tRNACys gene, which codes for a normal tRNACys with GCA anticodon [9].
  • As a first step towards developing a DNA transformation method for the ciliated protozoan Euplotes crassus we determined the minimum inhibitory concentration (MIC) for cell division in the presence of cycloheximide (Chx) for several cell lines and the range of Chx sensitivity for 106 different progeny cell lines derived by mating two lines [10].
 

Associations of Euplotes with chemical compounds

  • UGA is translated as cysteine in pheromone 3 of Euplotes octocarinatus [11].
  • Cross-talk between the autocrine (mitogenic) pheromone loop of the ciliate Euplotes raikovi and the intracellular cyclic AMP concentration [12].
  • The stop codon is TAA, as in other Euplotes genes, and is not the rare glutamine codon used in most other ciliates [13].
  • Sequence of the macronuclear DNA encoding large subunit ribosomal protein 29 (L29) in Euplotes crassus and cycloheximide sensitivity [10].
  • Staining with silver nitrate and thiol-specific coumarin maleimide has been demonstrated in the RBs of Euplotes and other hypotrichs; both of these properties were maintained in isolated RBs [14].
 

Gene context of Euplotes

  • We have cloned and characterized a human gene encoding TP2 (telomerase-associated protein 2), a protein with similarity to reverse transcriptases and the catalytic telomerase subunits from Saccharomyces cerevisiae and Euplotes aediculatus [15].
  • Catalytic protein subunits of telomerase from the ciliate Euplotes aediculatus and the yeast Saccharomyces cerevisiae contain reverse transcriptase motifs [16].
  • Structure-function relationships of pheromones of the ciliate Euplotes raikovi with mammalian growth factors: cross-reactivity between Er-1 and interleukin-2 systems [17].
  • Ribosomal cold-adaptation: characterization of the genes encoding the acidic ribosomal P0 and P2 proteins from the Antarctic ciliate Euplotes focardii [18].
  • An unusual histone H3 specific for early macronuclear development in Euplotes crassus [19].
 

Analytical, diagnostic and therapeutic context of Euplotes

References

  1. Developmentally programmed gene elimination in Euplotes crassus facilitates a switch in the telomerase catalytic subunit. Karamysheva, Z., Wang, L., Shrode, T., Bednenko, J., Hurley, L.A., Shippen, D.E. Cell (2003) [Pubmed]
  2. Stop codon selection in eukaryotic translation termination: comparison of the discriminating potential between human and ciliate eRF1s. Chavatte, L., Kervestin, S., Favre, A., Jean-Jean, O. EMBO J. (2003) [Pubmed]
  3. Proliferating cell nuclear antigen/cyclin in the ciliate Euplotes eurystomus: localization in the replication band and in micronuclei. Olins, D.E., Olins, A.L., Cacheiro, L.H., Tan, E.M. J. Cell Biol. (1989) [Pubmed]
  4. Telomerase RNAs of different ciliates have a common secondary structure and a permuted template. Lingner, J., Hendrick, L.L., Cech, T.R. Genes Dev. (1994) [Pubmed]
  5. Telomerase reverse transcriptase genes identified in Tetrahymena thermophila and Oxytricha trifallax. Bryan, T.M., Sperger, J.M., Chapman, K.B., Cech, T.R. Proc. Natl. Acad. Sci. U.S.A. (1998) [Pubmed]
  6. All gene-sized DNA molecules in four species of hypotrichs have the same terminal sequence and an unusual 3' terminus. Klobutcher, L.A., Swanton, M.T., Donini, P., Prescott, D.M. Proc. Natl. Acad. Sci. U.S.A. (1981) [Pubmed]
  7. Gene dosage as a possible major determinant for equal expression levels of genes encoding RNA polymerase subunits in the hypotrichous ciliate Euplotes octocarinatus. Kaufmann, J., Klein, A. Nucleic Acids Res. (1992) [Pubmed]
  8. Reiterative dG addition by Euplotes crassus telomerase during extension of non-telomeric DNA. Bednenko, J., Melek, M., Shippen, D.E. Nucleic Acids Res. (1998) [Pubmed]
  9. The hypotrichous ciliate Euplotes octocarinatus has only one type of tRNACys with GCA anticodon encoded on a single macronuclear DNA molecule. Grimm, M., Brünen-Nieweler, C., Junker, V., Heckmann, K., Beier, H. Nucleic Acids Res. (1998) [Pubmed]
  10. Sequence of the macronuclear DNA encoding large subunit ribosomal protein 29 (L29) in Euplotes crassus and cycloheximide sensitivity. Jahn, C.L., Erbeznik, M., Jaraczewski, J.W., Melek, M., Shippen, D.E. Gene (1994) [Pubmed]
  11. UGA is translated as cysteine in pheromone 3 of Euplotes octocarinatus. Meyer, F., Schmidt, H.J., Plümper, E., Hasilik, A., Mersmann, G., Meyer, H.E., Engström, A., Heckmann, K. Proc. Natl. Acad. Sci. U.S.A. (1991) [Pubmed]
  12. Cross-talk between the autocrine (mitogenic) pheromone loop of the ciliate Euplotes raikovi and the intracellular cyclic AMP concentration. Apone, F., Vallesi, A., Di Pretoro, B., Luporini, P. Exp. Cell Res. (2003) [Pubmed]
  13. Structure of the macronuclear polyubiquitin gene in Euplotes. Hauser, L.J., Roberson, A.E., Olins, D.E. Chromosoma (1991) [Pubmed]
  14. Isolation and characterization of chromatin replication bands and macronuclei from Euplotes eurystomus. Allen, R.L., Olins, A.L., Harp, J.M., Olins, D.E. Eur. J. Cell Biol. (1985) [Pubmed]
  15. Human telomerase contains evolutionarily conserved catalytic and structural subunits. Harrington, L., Zhou, W., McPhail, T., Oulton, R., Yeung, D.S., Mar, V., Bass, M.B., Robinson, M.O. Genes Dev. (1997) [Pubmed]
  16. Telomerase catalytic subunit homologs from fission yeast and human. Nakamura, T.M., Morin, G.B., Chapman, K.B., Weinrich, S.L., Andrews, W.H., Lingner, J., Harley, C.B., Cech, T.R. Science (1997) [Pubmed]
  17. Structure-function relationships of pheromones of the ciliate Euplotes raikovi with mammalian growth factors: cross-reactivity between Er-1 and interleukin-2 systems. Vallesi, A., Giuli, G., Ghiara, P., Scapigliati, G., Luporini, P. Exp. Cell Res. (1998) [Pubmed]
  18. Ribosomal cold-adaptation: characterization of the genes encoding the acidic ribosomal P0 and P2 proteins from the Antarctic ciliate Euplotes focardii. Pucciarelli, S., Marziale, F., Di Giuseppe, G., Barchetta, S., Miceli, C. Gene (2005) [Pubmed]
  19. An unusual histone H3 specific for early macronuclear development in Euplotes crassus. Jahn, C.L., Ling, Z., Tebeau, C.M., Klobutcher, L.A. Proc. Natl. Acad. Sci. U.S.A. (1997) [Pubmed]
  20. Purification of telomerase from Euplotes aediculatus: requirement of a primer 3' overhang. Lingner, J., Cech, T.R. Proc. Natl. Acad. Sci. U.S.A. (1996) [Pubmed]
  21. Differential distribution of alpha-tubulin isotypes in Euplotes eurystomus determined by confocal immunofluorescence microscopy. Olins, D.E., Olins, A.L., Robert-Nicoud, M., Jovin, T.M., Wehland, J., Weber, K. Biol. Cell (1989) [Pubmed]
  22. Identification of the tubulin gene family and sequence determination of one beta-tubulin gene in a cold-poikilotherm protozoan, the antarctic ciliate Euplotes focardii. Miceli, C., Ballarini, P., Di Giuseppe, G., Valbonesi, A., Luporini, P. J. Eukaryot. Microbiol. (1994) [Pubmed]
 
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