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MeSH Review

Comamonadaceae

 
 
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Disease relevance of Comamonadaceae

 

High impact information on Comamonadaceae

  • Cloning of the genes for a 4-sulphocatechol-oxidizing protocatechuate 3,4-dioxygenase from Hydrogenophaga intermedia S1 and identification of the amino acid residues responsible for the ability to convert 4-sulphocatechol [6].
  • The effect of intracellular molybdenum in Hydrogenophaga pseudoflava on the crystallographic structure of the seleno-molybdo-iron-sulfur flavoenzyme carbon monoxide dehydrogenase [7].
  • In contrast, heavy DNA from the phenanthrene incubations displayed a markedly different DGGE profile and was composed primarily of sequences related to the Acidovorax genus [8].
  • RNA-based stable isotope probing revealed that both pools harboured an abundant phenol-degrading Acidovorax species, and that the pool of inferior stability accommodated an additional closely related phenol-degrading Acidovorax species at high abundance [9].
  • Enhancing transport of hydrogenophaga flava ENV735 for bioaugmentation of aquifers contaminated with methyl tert-butyl ether [10].
 

Chemical compound and disease context of Comamonadaceae

 

Biological context of Comamonadaceae

 

Gene context of Comamonadaceae

  • D(-)-3-hydroxybutyrate dehydrogenase (BDH; EC 1.1.1.30) from a poly(D(-)-3-hydroxybutyrate) (PHB) degrading bacterium, Acidovorax sp. SA1, was purified using Toyopearl DEAE-650M, red-Sepharose CL-4B, and Q Sepharose FF [18].
 

Analytical, diagnostic and therapeutic context of Comamonadaceae

References

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  2. Purification, characterization, and crystallization of the components of the nitrobenzene and 2-nitrotoluene dioxygenase enzyme systems. Parales, R.E., Huang, R., Yu, C.L., Parales, J.V., Lee, F.K., Lessner, D.J., Ivkovic-Jensen, M.M., Liu, W., Friemann, R., Ramaswamy, S., Gibson, D.T. Appl. Environ. Microbiol. (2005) [Pubmed]
  3. Aerobic degradation of dinitrotoluenes and pathway for bacterial degradation of 2,6-dinitrotoluene. Nishino, S.F., Paoli, G.C., Spain, J.C. Appl. Environ. Microbiol. (2000) [Pubmed]
  4. Purification and characterization of a novel type of protocatechuate 3,4-dioxygenase with the ability to oxidize 4-sulfocatechol. Hammer, A., Stolz, A., Knackmuss, H. Arch. Microbiol. (1996) [Pubmed]
  5. Enzymatic hydrolysis of chemosynthesized atactic poly(3-hydroxybutyrate) by poly(3-hydroxyalkanoate) depolymerase from Acidovorax Sp. TP4 and Ralstonia pickettii T1. Wang, Y., Inagawa, Y., Osanai, Y., Kasuya, K., Saito, T., Matsumura, S., Doi, Y., Inoue, Y. Biomacromolecules (2002) [Pubmed]
  6. Cloning of the genes for a 4-sulphocatechol-oxidizing protocatechuate 3,4-dioxygenase from Hydrogenophaga intermedia S1 and identification of the amino acid residues responsible for the ability to convert 4-sulphocatechol. Contzen, M., Bürger, S., Stolz, A. Mol. Microbiol. (2001) [Pubmed]
  7. The effect of intracellular molybdenum in Hydrogenophaga pseudoflava on the crystallographic structure of the seleno-molybdo-iron-sulfur flavoenzyme carbon monoxide dehydrogenase. Hänzelmann, P., Dobbek, H., Gremer, L., Huber, R., Meyer, O. J. Mol. Biol. (2000) [Pubmed]
  8. Stable-isotope probing of bacteria capable of degrading salicylate, naphthalene, or phenanthrene in a bioreactor treating contaminated soil. Singleton, D.R., Powell, S.N., Sangaiah, R., Gold, A., Ball, L.M., Aitken, M.D. Appl. Environ. Microbiol. (2005) [Pubmed]
  9. Functional and compositional comparison of two activated sludge communities remediating coking effluent. Manefield, M., Griffiths, R.I., Leigh, M.B., Fisher, R., Whiteley, A.S. Environ. Microbiol. (2005) [Pubmed]
  10. Enhancing transport of hydrogenophaga flava ENV735 for bioaugmentation of aquifers contaminated with methyl tert-butyl ether. Streger, S.H., Vainberg, S., Dong, H., Hatzinger, P.B. Appl. Environ. Microbiol. (2002) [Pubmed]
  11. Isolation of a bacterial strain with the ability to utilize the sulfonated azo compound 4-carboxy-4'-sulfoazobenzene as the sole source of carbon and energy. Blümel, S., Contzen, M., Lutz, M., Stolz, A., Knackmuss, H.J. Appl. Environ. Microbiol. (1998) [Pubmed]
  12. Production of poly(3-hydroxybutyric acid-co-4-hydroxybutyric acid) and poly(4-hydroxybutyric acid) without subsequent degradation by Hydrogenophaga pseudoflava. Choi, M.H., Yoon, S.C., Lenz, R.W. Appl. Environ. Microbiol. (1999) [Pubmed]
  13. Initial reactions in the biodegradation of 1-chloro-4-nitrobenzene by a newly isolated bacterium, strain LW1. Katsivela, E., Wray, V., Pieper, D.H., Wittich, R.M. Appl. Environ. Microbiol. (1999) [Pubmed]
  14. Genetic diversity among 3-chloroaniline- and aniline-degrading strains of the Comamonadaceae. Boon, N., Goris, J., De Vos, P., Verstraete, W., Top, E.M. Appl. Environ. Microbiol. (2001) [Pubmed]
  15. Cloning and molecular characterization of the genes for carbon monoxide dehydrogenase and localization of molybdopterin, flavin adenine dinucleotide, and iron-sulfur centers in the enzyme of Hydrogenophaga pseudoflava. Kang, B.S., Kim, Y.M. J. Bacteriol. (1999) [Pubmed]
  16. Enzymatic hydrolysis of bacterial poly(3-hydroxybutyrate-co-3-hydroxypropionate)s by poly(3-hydroxyalkanoate) depolymerase from Acidovorax Sp. TP4. Wang, Y., Inagawa, Y., Saito, T., Kasuya, K., Doi, Y., Inoue, Y. Biomacromolecules (2002) [Pubmed]
  17. Active site residues controlling substrate specificity in 2-nitrotoluene dioxygenase from Acidovorax sp. strain JS42. Lee, K.S., Parales, J.V., Friemann, R., Parales, R.E. J. Ind. Microbiol. Biotechnol. (2005) [Pubmed]
  18. Biochemical and genetic characterization of a D(-)-3-hydroxybutyrate dehydrogenase from Acidovorax sp. strain SA1. Takanashi, M., Shibahara, T., Shiraki, M., Saito, T. J. Biosci. Bioeng. (2004) [Pubmed]
  19. Cloning and sequence analysis of poly(tetramethylene succinate) depolymerase from Acidovorax delafieldii strain BS-3. Uchida, H., Shigeno-Akutsu, Y., Nomura, N., Nakahara, T., Nakajima-Kambe, T. J. Biosci. Bioeng. (2002) [Pubmed]
 
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