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MeSH Review

Comamonas

 
 
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Disease relevance of Comamonas

  • Previous studies of the mechanism of the steroid isomerase of Comamonas (Pseudomonas) testosteroni have identified aspartate 38 as the proton porter which transfers the substrate's 4 beta proton to the 6 beta position of the product [1].
  • This profile was similar to the CFA profiles of Acidovorax delafieldii, Comamonas terrigena, and strains of an unclassified Centers for Disease Control group designated weak oxidizer group 1 [2].
  • The conversions of hydroxylaminobenzene to 2- and 4-aminophenol by a mutase from Ralstonia eutropha JMP134 and to 4-hydroxylaminobenzoate to protocatechuate by a lyase from Comamonas acidovorans NBA-10 and Pseudomonas sp. strain 4NT were proposed, but not experimentally proved, to proceed by the intermolecular transfer mechanism [3].
  • The novel isolates Comamonas testosteroni SPB-2 and KF-1 utilized 3-C4-SPC; Delftia acidovorans SPH-1 utilized 4-C6-SPC enantioselectively [4].
  • Ability of bacterial biphenyl dioxygenases from Burkholderia sp. LB400 and Comamonas testosteroni B-356 to catalyse oxygenation of ortho-hydroxychlorobiphenyls formed from PCBs by plants [5].
 

High impact information on Comamonas

  • Mechanistic roles of Ser-114, Tyr-155, and Lys-159 in 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase from Comamonas testosteroni [6].
  • Identification and characterization of a novel translational repressor of the steroid-inducible 3 alpha-hydroxysteroid dehydrogenase/carbonyl reductase gene in Comamonas testosteroni [7].
  • The Comamonas testosteroni 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase gene (hsdA) codes for an adaptive enzyme in the degradation of steroid compounds [8].
  • The oxygenase component of biphenyl dioxygenase (BPDO) from Comamonas testosteroni B-356 dihydroxylates biphenyl and some polychlorinated biphenyls (PCBs), thereby initiating their degradation [9].
  • 3alpha-Hydroxysteroid dehydrogenase/carbonyl reductase (3alpha-HSD/CR) from Comamonas testosteroni, a bacterium that is able to grow on steroids as the sole carbon source, catalyzes the oxidoreduction at position 3 of a variety of C19-27 steroids and the carbonyl reduction of a variety of nonsteroidal aldehydes and ketones [10].
 

Chemical compound and disease context of Comamonas

 

Biological context of Comamonas

 

Anatomical context of Comamonas

 

Gene context of Comamonas

  • Steroid degradation genes of Comamonas testosteroni TA441 are encoded in at least two gene clusters: one containing the meta-cleavage enzyme gene tesB and ORF1, 2, 3; and another consisting of ORF18, 17, tesI, H, A2, and tesA1, D, E, F, G (tesA2 to ORF18 and tesA1 to tesG are encoded in opposite directions) [20].
  • Purification and characterization of a prokaryotic xanthine dehydrogenase from Comamonas acidovorans [21].
  • The open channel characteristics of the bacterial porin Omp32 from Comamonas acidovorans were investigated by means of conductance measurements in planar lipid bilayers of the Montal-Mueller type [22].
  • Xanthine dehydrogenase (XDH) is induced in Comamonas acidovorans cells incubated in a limited medium with hypoxanthine as the only carbon and nitrogen source [21].
  • Mutagenetic replacements of conserved residues within the active site of the short-chain dehydrogenase/reductase (SDR) superfamily were studied using prokaryotic 3 beta/17 beta-hydroxysteroid dehydrogenase (3 beta/17 beta-HSD) from Comamonas testosteroni as a model system [23].
 

Analytical, diagnostic and therapeutic context of Comamonas

References

  1. Extent of proton transfer in the transition states of the reaction catalyzed by the delta 5-3-ketosteroid isomerase of Comamonas (Pseudomonas) testosteroni: site-specific replacement of the active site base, aspartate 38, by the weaker base alanine-3-sulfinate. Holman, C.M., Benisek, W.F. Biochemistry (1994) [Pubmed]
  2. Cellular fatty acid composition of Lautropia mirabilis. Daneshvar, M.I., Douglas, M.P., Weyant, R.S. J. Clin. Microbiol. (2001) [Pubmed]
  3. Bacterial conversion of hydroxylamino aromatic compounds by both lyase and mutase enzymes involves intramolecular transfer of hydroxyl groups. Nadeau, L.J., He, Z., Spain, J.C. Appl. Environ. Microbiol. (2003) [Pubmed]
  4. Mineralization of individual congeners of linear alkylbenzenesulfonate by defined pairs of heterotrophic bacteria. Schleheck, D., Knepper, T.P., Fischer, K., Cook, A.M. Appl. Environ. Microbiol. (2004) [Pubmed]
  5. Ability of bacterial biphenyl dioxygenases from Burkholderia sp. LB400 and Comamonas testosteroni B-356 to catalyse oxygenation of ortho-hydroxychlorobiphenyls formed from PCBs by plants. Francova, K., Macková, M., Macek, T., Sylvestre, M. Environ. Pollut. (2004) [Pubmed]
  6. Mechanistic roles of Ser-114, Tyr-155, and Lys-159 in 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase from Comamonas testosteroni. Hwang, C.C., Chang, Y.H., Hsu, C.N., Hsu, H.H., Li, C.W., Pon, H.I. J. Biol. Chem. (2005) [Pubmed]
  7. Identification and characterization of a novel translational repressor of the steroid-inducible 3 alpha-hydroxysteroid dehydrogenase/carbonyl reductase gene in Comamonas testosteroni. Xiong, G., Martin, H.J., Maser, E. J. Biol. Chem. (2003) [Pubmed]
  8. Regulation of the steroid-inducible 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase gene in Comamonas testosteroni. Xiong, G., Maser, E. J. Biol. Chem. (2001) [Pubmed]
  9. Steady-state kinetic characterization and crystallization of a polychlorinated biphenyl-transforming dioxygenase. Imbeault, N.Y., Powlowski, J.B., Colbert, C.L., Bolin, J.T., Eltis, L.D. J. Biol. Chem. (2000) [Pubmed]
  10. Molecular cloning, overexpression, and characterization of steroid-inducible 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase from Comamonas testosteroni. A novel member of the short-chain dehydrogenase/reductase superfamily. Möbus, E., Maser, E. J. Biol. Chem. (1998) [Pubmed]
  11. Characterization of active recombinant his-tagged oxygenase component of Comamonas testosteroni B-356 biphenyl dioxygenase. Hurtubise, Y., Barriault, D., Sylvestre, M. J. Biol. Chem. (1996) [Pubmed]
  12. Adaptation of Comamonas testosteroni TA441 to utilization of phenol by spontaneous mutation of the gene for a trans-acting factor. Arai, H., Akahira, S., Ohishi, T., Kudo, T. Mol. Microbiol. (1999) [Pubmed]
  13. Structural insight into the dioxygenation of nitroarene compounds: the crystal structure of nitrobenzene dioxygenase. Friemann, R., Ivkovic-Jensen, M.M., Lessner, D.J., Yu, C.L., Gibson, D.T., Parales, R.E., Eklund, H., Ramaswamy, S. J. Mol. Biol. (2005) [Pubmed]
  14. Active site residues of cis-2,3-dihydro-2,3-dihydroxybiphenyl dehydrogenase from Comamonas testosteroni strain B-356. Vedadi, M., Barriault, D., Sylvestre, M., Powlowski, J. Biochemistry (2000) [Pubmed]
  15. High-efficiency incorporation in vivo of tyrosine analogues with altered hydroxyl acidity in place of the catalytic tyrosine-14 of Delta 5-3-ketosteroid isomerase of Comamonas (Pseudomonas) testosteroni: effects of the modifications on isomerase kinetics. Brooks, B., Phillips, R.S., Benisek, W.F. Biochemistry (1998) [Pubmed]
  16. The genes encoding the hydroxylase of 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione in steroid degradation in Comamonas testosteroni TA441. Horinouchi, M., Hayashi, T., Kudo, T. J. Steroid Biochem. Mol. Biol. (2004) [Pubmed]
  17. Antibiotic resistance and enhanced insecticide catabolism as consequences of steroid induction in the gram-negative bacterium Comamonas testosteroni. Oppermann, U.C., Belai, I., Maser, E. J. Steroid Biochem. Mol. Biol. (1996) [Pubmed]
  18. Characterization of a 3 alpha-hydroxysteroid dehydrogenase/carbonyl reductase from the gram-negative bacterium Comamonas testosteroni. Oppermann, U.C., Maser, E. Eur. J. Biochem. (1996) [Pubmed]
  19. Biodegradation of quinoline by freely suspended and immobilized cells of Comamonas sp strain Q10. Chen, F., Cui, M., Fu, J., Sheng, G., Sun, G., Xu, M. J. Gen. Appl. Microbiol. (2003) [Pubmed]
  20. Steroid degradation gene cluster of Comamonas testosteroni consisting of 18 putative genes from meta-cleavage enzyme gene tesB to regulator gene tesR. Horinouchi, M., Kurita, T., Yamamoto, T., Hatori, E., Hayashi, T., Kudo, T. Biochem. Biophys. Res. Commun. (2004) [Pubmed]
  21. Purification and characterization of a prokaryotic xanthine dehydrogenase from Comamonas acidovorans. Xiang, Q., Edmondson, D.E. Biochemistry (1996) [Pubmed]
  22. Nonlinear and asymmetric open channel characteristics of an ion-selective porin in planar membranes. Mathes, A., Engelhardt, H. Biophys. J. (1998) [Pubmed]
  23. Active site directed mutagenesis of 3 beta/17 beta-hydroxysteroid dehydrogenase establishes differential effects on short-chain dehydrogenase/reductase reactions. Oppermann, U.C., Filling, C., Berndt, K.D., Persson, B., Benach, J., Ladenstein, R., Jörnvall, H. Biochemistry (1997) [Pubmed]
  24. Rapid assessment of the physiological status of the polychlorinated biphenyl degrader Comamonas testosteroni TK102 by flow cytometry. Hiraoka, Y., Kimbara, K. Appl. Environ. Microbiol. (2002) [Pubmed]
  25. Cloning and sequence analyses of a 2,3-dihydroxybiphenyl 1,2-dioxygenase gene ( bphC) from Comamonas sp. SMN4 for phylogenetic and structural analysis. Lee, N.R., Kwon, D.Y., Min, K.H. J. Ind. Microbiol. Biotechnol. (2003) [Pubmed]
 
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