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Hoffmann, R. A wiki for the life sciences where authorship matters. Nature Genetics (2008)
 
MeSH Review

Alnus

 
 
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Disease relevance of Alnus

  • Complementary DNA cloning and expression in Escherichia coli of Aln g I, the major allergen in pollen of alder (Alnus glutinosa) [1].
  • Enzymes of glucose metabolism were assayed in crude cell extracts of Frankia strains HFPArI3 and HFPCcI2 as well as in isolated vesicle clusters from Alnus rubra root nodules [2].
  • Induction of Rhizobium meliloti nodC gene by Alnus incana compounds [3].
 

High impact information on Alnus

  • Two responses were observed. "Resilient" xylem (Acer negundo and Alnus incana stems) showed no change in cavitation resistance after a cavitation-refilling cycle [4].
  • A cDNA clone, pAgthi1, encoding a homologue of yeast Thi4, which is involved in thiazole biosynthesis, was isolated from a library made from poly(A) RNA from actinorhizal nodules of Alnus glutinosa by differential screening with nodule and root cDNA, respectively [5].
  • Identification of agthi1, whose product is involved in biosynthesis of the thiamine precursor thiazole, in actinorhizal nodules of Alnus glutinosa [5].
  • The topologies obtained by the different methods were completely congruent, and bootstrapping strongly supported the division of the family Betulaceae into two major clades, Betuleae (Alnus and Betula) and Coryleae (other members) [6].
  • A nodule-specific gene family from Alnus glutinosa encodes glycine- and histidine-rich proteins expressed in the early stages of actinorhizal nodule development [7].
 

Chemical compound and disease context of Alnus

 

Biological context of Alnus

  • To elucidate the phylogenetic relationships within the tribe and compare the relative amounts of genetic diversity between the genera Alnus and Betula, rbcL and 18S rRNA gene sequences as well as rDNA internal transcribed spacer (ITS1 and ITS2) sequences were obtained and compared [10].
 

Anatomical context of Alnus

  • Allergens in birch (Betula) pollens from B. pendula grown in Australia and Norway, B. davurica and B. populofolia and from alder (Alnus incana) were identified by electroblotting, following separation by SDS-PAGE, transfer to nitrocellulose membranes and incubation with sera from birch pollen-allergic subjects [11].
 

Associations of Alnus with chemical compounds

  • Nitrogen metabolism in actinorhizal nodules of Alnus glutinosa: expression of glutamine synthetase and acetylornithine transaminase [12].
  • Two nodule cDNA clones representing genes involved in Alnus glutinosa nitrogen metabolism were analysed. ag11 encoded glutamine synthetase (GS), the enzyme responsible for ammonium assimilation, while ag118 encoded acetylornithine transaminase (AOTA), an enzyme involved in the biosynthesis of citrulline, the nitrogen transport form in Alnus [12].
  • Two diarylheptanoids, oregonin (1) and hirsutanone (2), were isolated by bioassay-guided fractionation of the methanol extracts of the leaves of Alnus japonica Steud and their structures were elucidated from their spectroscopic data [13].
  • Because the N-fixer red alder (Alnus rubra Bong.) comprised 33% of the 40-year-old stand, this site had significantly greater concentrations and pools of N in the forest floor than sites without red alder [14].
  • Sucrose synthase and enolase expression in actinorhizal nodules of Alnus glutinosa: comparison with legume nodules [15].
 

Gene context of Alnus

  • Inhibition of cyclooxygenase-2 expression by diarylheptanoids from the bark of Alnus hirsuta var. sibirica [16].
  • Antioxidant effects of diarylheptanoid derivatives from Alnus japonica on human LDL oxidation [13].
  • During the screening for diacylglycerol acyltransferase (DGAT) inhibitors from natural products, the lupane-type triterpenoid betulinic acid was isolated from the methanol extract of Alnus hirsuta [17].
  • Ectomycorrhizal and arbuscular mycorrhizal colonization of Alnus acuminata from Calilegua National Park (Argentina) [18].
 

Analytical, diagnostic and therapeutic context of Alnus

  • Immunotherapy consisted of administration of a set of capsules containing progressively increasing amounts of birch (Betula pendula) and speckled alder (Alnus incana) allergens in powder form with controlled granulometry [19].
  • Horizontal isoelectric focusing (IEF) and two-dimensional sodium dodecyl sulfate polyacrylamide gel electrophoresis (2-D SDS-PAGE) combined with electrophoretic transfer (ET) and immunoautoradiography (IAR) were used to characterize the crude alder (Alnus incana) pollen extract (AI crude) and fraction AI 34 [20].

References

  1. Complementary DNA cloning and expression in Escherichia coli of Aln g I, the major allergen in pollen of alder (Alnus glutinosa). Breiteneder, H., Ferreira, F., Reikerstorfer, A., Duchene, M., Valenta, R., Hoffmann-Sommergruber, K., Ebner, C., Breitenbach, M., Kraft, D., Scheiner, O. J. Allergy Clin. Immunol. (1992) [Pubmed]
  2. Enzymes of glucose metabolism in Frankia sp. Lopez, M.F., Torrey, J.G. J. Bacteriol. (1985) [Pubmed]
  3. Induction of Rhizobium meliloti nodC gene by Alnus incana compounds. Małek, W. J. Basic Microbiol. (1996) [Pubmed]
  4. Cavitation fatigue. Embolism and refilling cycles can weaken the cavitation resistance of xylem. Hacke, U.G., Stiller, V., Sperry, J.S., Pittermann, J., McCulloh, K.A. Plant Physiol. (2001) [Pubmed]
  5. Identification of agthi1, whose product is involved in biosynthesis of the thiamine precursor thiazole, in actinorhizal nodules of Alnus glutinosa. Ribeiro, A., Praekelt, U., Akkermans, A.D., Meacock, P.A., van Kammen, A., Bisseling, T., Pawlowski, K. Plant J. (1996) [Pubmed]
  6. Complete congruence between morphological and rbcL-based molecular phylogenies in birches and related species (Betulaceae). Bousquet, J., Strauss, S.H., Li, P. Mol. Biol. Evol. (1992) [Pubmed]
  7. A nodule-specific gene family from Alnus glutinosa encodes glycine- and histidine-rich proteins expressed in the early stages of actinorhizal nodule development. Pawlowski, K., Twigg, P., Dobritsa, S., Guan, C., Mullin, B.C. Mol. Plant Microbe Interact. (1997) [Pubmed]
  8. Oxygen protection of nitrogenase in Frankia sp. HFPArI3. Murry, M.A., Fontaine, M.S., Tjepkema, J.D. Arch. Microbiol. (1984) [Pubmed]
  9. Modification of the protein expression pattern induced in the nitrogen-fixing actinomycete Frankia sp. strain ACN14a-tsr by root exudates of its symbiotic host Alnus glutinosa and cloning of the sodF gene. Hammad, Y., Maréchal, J., Cournoyer, B., Normand, P., Domenach, A.M. Can. J. Microbiol. (2001) [Pubmed]
  10. Genetic diversity and phylogenetic relationships between birches and alders using ITS, 18S rRNA and rbcL gene sequences. Savard, L., Michaud, M., Bousquet, J. Mol. Phylogenet. Evol. (1993) [Pubmed]
  11. A comparison of the antigenic and allergenic components of birch and alder pollens in Scandinavia and Australia. Hemmens, V.J., Baldo, B.A., Bass, D., Vik, H., Florvaag, E., Elsayed, S. Int. Arch. Allergy Appl. Immunol. (1988) [Pubmed]
  12. Nitrogen metabolism in actinorhizal nodules of Alnus glutinosa: expression of glutamine synthetase and acetylornithine transaminase. Guan, C., Ribeiro, A., Akkermans, A.D., Jing, Y., van Kammen, A., Bisseling, T., Pawlowski, K. Plant Mol. Biol. (1996) [Pubmed]
  13. Antioxidant effects of diarylheptanoid derivatives from Alnus japonica on human LDL oxidation. Lee, W.S., Kim, J.R., Im, K.R., Cho, K.H., Sok, D.E., Jeong, T.S. Planta Med. (2005) [Pubmed]
  14. Belowground carbon pools and processes in different age stands of Douglas-fir. Klopatek, J.M. Tree Physiol. (2002) [Pubmed]
  15. Sucrose synthase and enolase expression in actinorhizal nodules of Alnus glutinosa: comparison with legume nodules. van Ghelue, M., Ribeiro, A., Solheim, B., Akkermans, A.D., Bisseling, T., Pawlowski, K. Mol. Gen. Genet. (1996) [Pubmed]
  16. Inhibition of cyclooxygenase-2 expression by diarylheptanoids from the bark of Alnus hirsuta var. sibirica. Lee, M.W., Kim, J.H., Jeong, D.W., Ahn, K.H., Toh, S.H., Surh, Y.J. Biol. Pharm. Bull. (2000) [Pubmed]
  17. Inhibition of diacylglycerol acyltransferase by betulinic acid from Alnus hirsuta. Chung, M.Y., Rho, M.C., Lee, S.W., Park, H.R., Kim, K., Lee, I.A., Kim, D.H., Jeune, K.H., Lee, H.S., Kim, Y.K. Planta Med. (2006) [Pubmed]
  18. Ectomycorrhizal and arbuscular mycorrhizal colonization of Alnus acuminata from Calilegua National Park (Argentina). Becerra, A., Zak, M.R., Horton, T.R., Micolini, J. Mycorrhiza (2005) [Pubmed]
  19. Preseasonal intranasal immunotherapy in birch-alder allergic rhinitis. A double-blind study. Cirla, A.M., Sforza, N., Roffi, G.P., Alessandrini, A., Stanizzi, R., Dorigo, N., Sala, E., Della Torre, F. Allergy (1996) [Pubmed]
  20. Comparative studies on tree pollen allergens. XIII. Partial characterization of the alder (Alnus incana) pollen extract by two-dimensional IEF/SDS-PAG electrophoresis combined with electrophoretic transfer and immunoautoradiography. Florvaag, E., Elsayed, S., Hammer, A.S. Int. Arch. Allergy Appl. Immunol. (1986) [Pubmed]
 
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