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AK1  -  adenylate kinase 1

Gallus gallus

 
 
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Disease relevance of LOC396002

 

High impact information on LOC396002

  • Characterization of the targeting, binding, and phosphorylation site domains of an A kinase anchor protein and a myristoylated alanine-rich C kinase substrate-like analog that are encoded by a single gene [2].
  • Lastly, most of the intermolecular NOEs between AK and the adenosine moieties of MgAP5A have been identified: Thr39, Leu43, Gly64, Leu66, Val67, Val72, and Gln101 are in proximity to the adenosine moiety of the adenosine 5'-monophosphate site, whereas Thr23 is in proximity to that of the adenosine 5'-triphosphate site [3].
  • The structural and functional roles of two conserved active site residues, Arg-97 and Arg-132, in chicken muscle adenylate kinase (AK) were evaluated by site-directed mutagenesis in conjunction with one- and two-dimensional proton nuclear magnetic resonance (NMR), kinetics, and guanidine hydrochloride-induced denaturation [4].
  • Irradiation of adenylate kinase (AK) from chicken muscle with 300-400-nm light in the presence of 0.25 mM vanadate ion first inactivated the enzyme and then cleaved the polypeptide chain near the NH2 terminus [5].
  • For proper interpretation of the steady-state kinetic data, viscosity-dependent kinetics was used to show that the chemical step is partially rate-limiting in the catalysis of AK [6].
 

Biological context of LOC396002

  • The chicken AK1 gene spanned about 6 kilobase pairs and consisted of 7 exons [7].
  • The gene encoding cytosolic adenylate kinase (AK1) was isolated from a chicken genomic DNA library by using its cDNA as a hybridization probe [7].
  • When projected on the three-dimensional structure of the AK1 protein molecule, introns fell either between or near the ends of alpha-helices and beta-strands, and most of the coding exons encoded at least one alpha-helix and one beta-strand [7].
  • These data demonstrate that although activation of PKC or Ca2+ signals is not required, the cylic AMP-dependent A kinase is required for PTHrP to regulate key hallmarks of GPC phenotype [8].
  • Development of myokinase mRNA during embryogenesis of the chick [9].
 

Anatomical context of LOC396002

 

Associations of LOC396002 with chemical compounds

  • The Lys-27 to methionine (K27M) mutant showed only slight increases in kcat and Km, but a substantial increase (1.8 kcal/mol) in the free energy of unfolding, relative to the WT AK [6].
  • In addition, a lysine residue (Lys-21 in the case of AK) along with a glycine-rich loop is considered "essential" in the catalysis of kinases and other nucleotide binding proteins [6].
  • This newly introduced histidine is already present in most other adenylate kinases and was regarded to be important or even essential for the catalytic reaction of AK [1].
  • The results revealed the significance of proline 17 in the conformation and function of AK [12].
  • The effect of interferon on myokinase was less than on creatine kinase [11].
 

Analytical, diagnostic and therapeutic context of LOC396002

  • The structural and functional roles of threonine-23 in the chicken muscle adenylate kinase (AK) were investigated by site-directed mutagenesis coupled with proton nuclear magnetic resonance (NMR) and phosphorus stereochemistry [13].
  • These studies indicate that in the ATP-AK complex proline-17 is close to the phosphate chain of ATP but not AMP, consistent with the latest evaluation of nucleotide-binding sites on mitochondrial matrix AK by X-ray crystallography [Diederichs, K., & Schulz, G.E. (1991) J. Mol. Biol. 217, 541-549] [5].
  • Circular dichroism spectra of the two chimeric enzymes suggest that UAU and AUA have similar folding structures to UCK and AK, respectively [14].

References

  1. Fluorescence and NMR investigations on the ligand binding properties of adenylate kinases. Reinstein, J., Vetter, I.R., Schlichting, I., Rösch, P., Wittinghofer, A., Goody, R.S. Biochemistry (1990) [Pubmed]
  2. Characterization of the targeting, binding, and phosphorylation site domains of an A kinase anchor protein and a myristoylated alanine-rich C kinase substrate-like analog that are encoded by a single gene. Rossi, E.A., Li, Z., Feng, H., Rubin, C.S. J. Biol. Chem. (1999) [Pubmed]
  3. Mechanism of adenylate kinase. 1H, 13C, and 15N NMR assignments, secondary structures, and substrate binding sites. Byeon, I.J., Yan, H., Edison, A.S., Mooberry, E.S., Abildgaard, F., Markley, J.L., Tsai, M.D. Biochemistry (1993) [Pubmed]
  4. Mechanism of adenylate kinase. Structural and functional roles of the conserved arginine-97 and arginine-132. Dahnke, T., Shi, Z., Yan, H., Jiang, R.T., Tsai, M.D. Biochemistry (1992) [Pubmed]
  5. Vanadate catalyzes photocleavage of adenylate kinase at proline-17 in the phosphate-binding loop. Cremo, C.R., Loo, J.A., Edmonds, C.G., Hatlelid, K.M. Biochemistry (1992) [Pubmed]
  6. Mechanism of adenylate kinase. Are the essential lysines essential? Tian, G.C., Yan, H.G., Jiang, R.T., Kishi, F., Nakazawa, A., Tsai, M.D. Biochemistry (1990) [Pubmed]
  7. Structure and complete nucleotide sequence of the gene encoding chicken cytosolic adenylate kinase. Suminami, Y., Kishi, F., Torigoe, T., Nakazawa, A. J. Biochem. (1988) [Pubmed]
  8. Parathyroid hormone-related peptide regulation of chick tibial growth plate chondrocyte maturation requires protein kinase A. Zuscik, M.J., O'Keefe, R.J., Gunter, T.E., Puzas, J.E., Schwarz, E.M., Rosier, R.N. J. Orthop. Res. (2002) [Pubmed]
  9. Development of myokinase mRNA during embryogenesis of the chick. Kishi, F., Nakazawa, A. J. Biochem. (1985) [Pubmed]
  10. Cyclic adenosine 3',5'-monophosphate-dependent phosphorylation of HMG 14 inhibits its interactions with nucleosomes. Spaulding, S.W., Fucile, N.W., Bofinger, D.P., Sheflin, L.G. Mol. Endocrinol. (1991) [Pubmed]
  11. Multiple effects of interferon on myogenesis in chicken myoblast cultures. Tomita, Y., Hasegawa, S. Biochim. Biophys. Acta (1984) [Pubmed]
  12. Conformational and functional significance of residue proline 17 in chicken muscle adenylate kinase. Sheng, X., Pan, X., Wang, C., Zhang, Y., Jing, G. FEBS Lett. (2001) [Pubmed]
  13. Mechanism of adenylate kinase. What can be learned from a mutant enzyme with minor perturbation in kinetic parameters? Shi, Z., Byeon, I.J., Jiang, R.T., Tsai, M.D. Biochemistry (1993) [Pubmed]
  14. Exchange of nucleoside monophosphate-binding domains in adenylate kinase and UMP/CMP kinase. Okajima, T., Fukamizo, T., Goto, S., Fukui, T., Tanizawa, K. J. Biochem. (1998) [Pubmed]
 
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