The world's first wiki where authorship really matters (Nature Genetics, 2008). Due credit and reputation for authors. Imagine a global collaborative knowledge base for original thoughts. Search thousands of articles and collaborate with scientists around the globe.

wikigene or wiki gene protein drug chemical gene disease author authorship tracking collaborative publishing evolutionary knowledge reputation system wiki2.0 global collaboration genes proteins drugs chemicals diseases compound
Hoffmann, R. A wiki for the life sciences where authorship matters. Nature Genetics (2008)
 
MeSH Review

Photobacterium

 
 
Welcome! If you are familiar with the subject of this article, you can contribute to this open access knowledge base by deleting incorrect information, restructuring or completely rewriting any text. Read more.
 

Disease relevance of Photobacterium

 

High impact information on Photobacterium

  • A library of Photobacterium phosphoreum DNA was screened in lambda 2001 for the lumazine protein gene, using two degenerate 17-mer oligonucleotide probes that were deduced from a partial protein primary sequence [6].
  • The presence of a copper/zinc superoxide dismutase in the bacterium Photobacterium leiognathi: a likely case of gene transfer from eukaryotes to prokaryotes [7].
  • Cloning and expression of the Photobacterium phosphoreum luminescence system demonstrates a unique lux gene organization [8].
  • Bacteriocuprein superoxide dismutase of Photobacterium leiognathi. Isolation and sequence of the gene and evidence for a precursor form [9].
  • Fatty acid reduction in Photobacterium phosphoreum is catalyzed in a coupled reaction by two enzymes: acyl-protein synthetase, which activates fatty acids (+ATP), and a reductase, which reduces activated fatty acids (+NADPH) to aldehyde [10].
 

Chemical compound and disease context of Photobacterium

  • The luminescent bacterium Photobacterium phosphoreum has been shown to possess a fatty acid reductase based on the stimulation of the aldehyde-dependent luminescent reaction on incubation of the enzyme with ATP, NADPH, and tetradecanoic acid (Riendeau, D., and Meighen, E. (1979) J. Biol. Chem. 254, 7488-7490) [11].
  • The enzyme responsible for the stimulation by ATP AND NADPH of light emission catalyzed by bacterial luciferase has been partially purified from extracts of the luminescent bacterium, Photobacterium phosphoreum [12].
  • Lumazine protein, a novel protein containing 6,7-dimethyl-8-ribityllumazine as a bound prosthetic group, is one of the several major proteins produced by the bioluminescent bacteria, Photobacterium phosphoreum. purification to complete homogeneity from cell extracts is achieved in six steps [13].
  • Differential acylation in vitro with tetradecanoyl coenzyme A and tetradecanoic acid (+ATP) of three polypeptides shown to have induced synthesis in Photobacterium phosphoreum [14].
  • Crystals of a copper-zinc superoxide dismutase from Photobacterium leiognathi, a luminescent marine bacterium that is the species-specific symbiont of the ponyfish, have been obtained from 2-methyl-2,4-pentanediol solutions [15].
 

Biological context of Photobacterium

 

Gene context of Photobacterium

  • An rpoE-like locus controls outer membrane protein synthesis and growth at cold temperatures and high pressures in the deep-sea bacterium Photobacterium sp. strain SS9 [21].
  • To more fully explore the role of unsaturated fatty acids in high-pressure, low-temperature growth, the fabF gene from the psychrotolerant, piezophilic deep-sea bacterium Photobacterium profundum strain SS9 was characterized and its role and regulation were examined [22].
  • Resolution of the fatty acid reductase from Photobacterium phosphoreum into acyl protein synthetase and acyl-CoA reductase activities. Evidence for an enzyme complex [23].
  • Cu,Zn superoxide dismutase from Photobacterium leiognathi has been cloned and expressed in Escherichia coli [24].
  • In contrast, the Photobacterium fischeri NAD(P)H-FMN oxidoreductase FRG showed the same ping-pong mechanism in both the single-enzyme spectrophotometric and the luciferase-coupled assays [25].
 

Analytical, diagnostic and therapeutic context of Photobacterium

  • The catalytic activity of a mutant of Photobacterium leiognathi Cu, Zn superoxide dismutase in which the Glu59 residue, conserved in most bacterial variants of the enzyme, has been replaced by glutamine was investigated by pulse radiolysis [26].

References

  1. Evolutionary constraints for dimer formation in prokaryotic Cu,Zn superoxide dismutase. Bordo, D., Matak, D., Djinovic-Carugo, K., Rosano, C., Pesce, A., Bolognesi, M., Stroppolo, M.E., Falconi, M., Battistoni, A., Desideri, A. J. Mol. Biol. (1999) [Pubmed]
  2. Electronic excitation transfer in the complex of lumazine protein with bacterial bioluminescence intermediates. Lee, J., Wang, Y.Y., Gibson, B.G. Biochemistry (1991) [Pubmed]
  3. Protein-ligand interactions in lumazine protein and in Desulfovibrio flavodoxins from resonance coherent anti-Stokes Raman spectra. Irwin, R.M., Visser, A.J., Lee, J., Carreira, L.A. Biochemistry (1980) [Pubmed]
  4. Characterization of chloramphenicol and florfenicol resistance in Escherichia coli associated with bovine diarrhea. White, D.G., Hudson, C., Maurer, J.J., Ayers, S., Zhao, S., Lee, M.D., Bolton, L., Foley, T., Sherwood, J. J. Clin. Microbiol. (2000) [Pubmed]
  5. Diluent composition for use of API 20E in characterizing marine and estuarine bacteria. MacDonell, M.T., Singleton, F.L., Hood, M.A. Appl. Environ. Microbiol. (1982) [Pubmed]
  6. Borrowed proteins in bacterial bioluminescence. O'Kane, D.J., Woodward, B., Lee, J., Prasher, D.C. Proc. Natl. Acad. Sci. U.S.A. (1991) [Pubmed]
  7. The presence of a copper/zinc superoxide dismutase in the bacterium Photobacterium leiognathi: a likely case of gene transfer from eukaryotes to prokaryotes. Bannister, J.V., Parker, M.W. Proc. Natl. Acad. Sci. U.S.A. (1985) [Pubmed]
  8. Cloning and expression of the Photobacterium phosphoreum luminescence system demonstrates a unique lux gene organization. Mancini, J.A., Boylan, M., Soly, R.R., Graham, A.F., Meighen, E.A. J. Biol. Chem. (1988) [Pubmed]
  9. Bacteriocuprein superoxide dismutase of Photobacterium leiognathi. Isolation and sequence of the gene and evidence for a precursor form. Steinman, H.M. J. Biol. Chem. (1987) [Pubmed]
  10. Intersubunit transfer of fatty acyl groups during fatty acid reduction. Wall, L., Rodriguez, A., Meighen, E. J. Biol. Chem. (1986) [Pubmed]
  11. Co-induction of fatty acid reductase and luciferase during development of bacterial bioluminescence. Riendeau, D., Meighen, E. J. Biol. Chem. (1980) [Pubmed]
  12. Evidence for a fatty acid reductase catalyzing the synthesis of aldehydes for the bacterial bioluminescent reaction. Resolution from luciferase and dependence on fatty acids. Riendeau, D., Meighen, E. J. Biol. Chem. (1979) [Pubmed]
  13. Lumazine protein from the bioluminescent bacterium Photobacterium phosphoreum. Purification and characterization. Small, E.D., Koka, P., Lee, J. J. Biol. Chem. (1980) [Pubmed]
  14. Differential acylation in vitro with tetradecanoyl coenzyme A and tetradecanoic acid (+ATP) of three polypeptides shown to have induced synthesis in Photobacterium phosphoreum. Wall, L., Rodriquez, A., Meighen, E. J. Biol. Chem. (1984) [Pubmed]
  15. Crystallographic characterization of a Cu,Zn superoxide dismutase from Photobacterium leiognathi. Redford, S.M., McRee, D.E., Getzoff, E.D., Steinman, H.M., Tainer, J.A. J. Mol. Biol. (1990) [Pubmed]
  16. Collaborative effects of Photobacterium CuZn superoxide dismutase (SODs) and human AP endonuclease in DNA repair and SOD-deficient Escherichia coli under oxidative stress. Kim, Y.G. Free Radic. Biol. Med. (2004) [Pubmed]
  17. The lumazine protein-encoding gene in Photobacterium leiognathi is linked to the lux operon. Lin, J.W., Chao, Y.F., Weng, S.F. Gene (1993) [Pubmed]
  18. Characteristic analysis of the luxG gene encoding the probable flavin reductase that resides in the lux operon of Photobacterium leiognathi. Lin, J.W., Chao, Y.F., Weng, S.F. Biochem. Biophys. Res. Commun. (1998) [Pubmed]
  19. The amino-acid sequence of copper/zinc superoxide dismutase from swordfish liver. Comparison of copper/zinc superoxide dismutase sequences. Rocha, H.A., Bannister, W.H., Bannister, J.V. Eur. J. Biochem. (1984) [Pubmed]
  20. Covalent reaction of cerulenin at the active site of acyl-CoA reductase of Photobacterium phosphoreum. Wall, L., Meighen, E. Biochem. Cell Biol. (1989) [Pubmed]
  21. An rpoE-like locus controls outer membrane protein synthesis and growth at cold temperatures and high pressures in the deep-sea bacterium Photobacterium sp. strain SS9. Chi, E., Bartlett, D.H. Mol. Microbiol. (1995) [Pubmed]
  22. FabF is required for piezoregulation of cis-vaccenic acid levels and piezophilic growth of the deep-Sea bacterium Photobacterium profundum strain SS9. Allen, E.E., Bartlett, D.H. J. Bacteriol. (2000) [Pubmed]
  23. Resolution of the fatty acid reductase from Photobacterium phosphoreum into acyl protein synthetase and acyl-CoA reductase activities. Evidence for an enzyme complex. Riendeau, D., Rodriguez, A., Meighen, E. J. Biol. Chem. (1982) [Pubmed]
  24. Spectroscopic characterization of recombinant Cu,Zn superoxide dismutase from Photobacterium leiognathi expressed in Escherichia coli: evidence for a novel catalytic copper binding site. Foti, D., Lo Curto, B., Cuzzocrea, G., Stroppolo, M.E., Polizio, F., Venanzi, M., Desideri, A. Biochemistry (1997) [Pubmed]
  25. Mechanism of reduced flavin transfer from Vibrio harveyi NADPH-FMN oxidoreductase to luciferase. Lei, B., Tu, S.C. Biochemistry (1998) [Pubmed]
  26. Toward the engineering of a super efficient enzyme. Folcarelli, S., Venerini, F., Battistoni, A., O'neill, P., Rotilio, G., Desideri, A. Biochem. Biophys. Res. Commun. (1999) [Pubmed]
 
WikiGenes - Universities