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Chemical Compound Review

S1634_SIGMA     2-[(5-amino-5-carboxy- pentyl)amino]pentane...

Synonyms: AR-1J9458, AC1L1AP2, AC1Q5S7U, 997-68-2, N6-(L-1,3-dicarboxylpropyl)-L-lysine, ...
 
 
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Disease relevance of saccharopine

  • To complete the studies on the enzymes associated with familial hyperlysinemia, saccharopine oxidoreductase was partially purified from human liver and characterized [1].
  • Hyperlysinemia with saccharopinuria due to combined lysine-ketoglutarate reductase and saccharopine dehydrogenase deficiencies presenting as cystinuria [2].
  • During attacks, these patients excreted alpha-keto-adipic, alpha-hydroxy-adipic, and alpha-aminoadipic acids, branched-chain keto acids and saccharopine in addition to lactic, pyruvic, and dicarboxylic acids characteristic of Reye syndrome [3].
 

High impact information on saccharopine

  • We have isolated a cDNA clone, designated ZLKRSDH, encoding the bifunctional enzyme lysine-ketoglutarate reductase/saccharopine dehydrogenase (LKR/SDH) from maize [4].
  • In yeast, lysine-ketoglutarate reductase and saccharopine dehydrogenase are encoded by the LYS1 and LYS9 genes, respectively, and we searched the available sequence databases for their human homologues [5].
  • It is suggested that familial hyperlysinemia, type I, be applied to patients with major defects in lysine-ketoglutarate reductase and saccharopine dehydrogenase, and that familial hyperlysinemia, type II, to be used to designate patients in whom significant amounts of lysine-ketoglutarate reductase are retained [1].
  • Chemical modification of the active site sulfhydryl group of saccharopine dehydrogenase (L-lysine-forming) [6].
  • Both plants and animals catabolize lysine via saccharopine by two consecutive enzymes, lysine-ketoglutarate reductase (LKR) and saccharopine dehydrogenase (SDH), which are linked on a single polypeptide [7].
 

Biological context of saccharopine

 

Anatomical context of saccharopine

 

Associations of saccharopine with other chemical compounds

  • Both in mammals and plants, excess lysine (Lys) is catabolized via saccharopine into alpha-amino adipic semialdehyde and glutamate by two consecutive enzymes, Lys-ketoglutarate reductase (LKR) and saccharopine dehydrogenase (SDH), which are linked on a single bifunctional polypeptide [14].
  • The basic biochemical properties of the monofunctional SDH, including its pH optimum as well as the apparent Michaelis constant (K(m)) values for its substrates saccharopine and nicotinamide adenine dinucleotide at neutral and basic pH values, were similar to those of its SDH counterpart that is linked to LKR [15].
  • Kinetic data have been measured for the histidine-tagged saccharopine dehydrogenase from Saccharomyces cerevisiae, suggesting the ordered addition of nicotinamide adenine dinucleotide (NAD) followed by saccharopine in the physiologic reaction direction [16].
  • Inactivation of the lys7 gene, encoding saccharopine reductase in Penicillium chrysogenum, leads to accumulation of the secondary metabolite precursors piperideine-6-carboxylic acid and pipecolic acid from alpha-aminoadipic acid [9].
  • Kinetic studies were consistent with an ordered sequence mechanism for LOR, where 2-oxoglutarate is the first substrate and saccharopine is the last product [17].
 

Gene context of saccharopine

 

Analytical, diagnostic and therapeutic context of saccharopine

References

  1. Familial hyperlysinemia: enzyme studies, diagnostic methods, comments on terminology. Dancis, J., Hutzler, J., Cox, R.P. Am. J. Hum. Genet. (1979) [Pubmed]
  2. Hyperlysinemia with saccharopinuria due to combined lysine-ketoglutarate reductase and saccharopine dehydrogenase deficiencies presenting as cystinuria. Cederbaum, S.D., Shaw, K.N., Dancis, J., Hutzler, J., Blaskovics, J.C. J. Pediatr. (1979) [Pubmed]
  3. Recurrent, familial Reye-like syndrome with a new complex amino and organic aciduria. Elpeleg, O.N., Christensen, E., Hurvitz, H., Branski, D. Eur. J. Pediatr. (1990) [Pubmed]
  4. The role of opaque2 in the control of lysine-degrading activities in developing maize endosperm. Kemper, E.L., Neto, G.C., Papes, F., Moraes, K.C., Leite, A., Arruda, P. Plant Cell (1999) [Pubmed]
  5. Identification of the alpha-aminoadipic semialdehyde synthase gene, which is defective in familial hyperlysinemia. Sacksteder, K.A., Biery, B.J., Morrell, J.C., Goodman, B.K., Geisbrecht, B.V., Cox, R.P., Gould, S.J., Geraghty, M.T. Am. J. Hum. Genet. (2000) [Pubmed]
  6. Chemical modification of the active site sulfhydryl group of saccharopine dehydrogenase (L-lysine-forming). Ogawa, H., Okamoto, M., Fujioka, M. J. Biol. Chem. (1979) [Pubmed]
  7. A novel composite locus of Arabidopsis encoding two polypeptides with metabolically related but distinct functions in lysine catabolism. Tang, G., Zhu, X., Tang, X., Galili, G. Plant J. (2000) [Pubmed]
  8. A proposed proton shuttle mechanism for saccharopine dehydrogenase from Saccharomyces cerevisiae. Xu, H., Alguindigue, S.S., West, A.H., Cook, P.F. Biochemistry (2007) [Pubmed]
  9. Inactivation of the lys7 gene, encoding saccharopine reductase in Penicillium chrysogenum, leads to accumulation of the secondary metabolite precursors piperideine-6-carboxylic acid and pipecolic acid from alpha-aminoadipic acid. Naranjo, L., Martín de Valmaseda, E., Casqueiro, J., Ullán, R.V., Lamas-Maceiras, M., Bañuelos, O., Martín, J.F. Appl. Environ. Microbiol. (2004) [Pubmed]
  10. A spectrophotometric assay for meso-diaminopimelate decarboxylase and L-alpha-amino-epsilon-caprolactam hydrolase. Laber, B., Amrhein, N. Anal. Biochem. (1989) [Pubmed]
  11. Crystal structure of saccharopine reductase from Magnaporthe grisea, an enzyme of the alpha-aminoadipate pathway of lysine biosynthesis. Johansson, E., Steffens, J.J., Lindqvist, Y., Schneider, G. Structure (2000) [Pubmed]
  12. Lysine metabolism in higher plants. Azevedo, R.A., Lea, P.J. Amino Acids (2001) [Pubmed]
  13. Regulation of oxidative degradation of L-lysine in rat liver mitochondria. Scislowski, P.W., Foster, A.R., Fuller, M.F. Biochem. J. (1994) [Pubmed]
  14. Purification and characterization of bifunctional lysine-ketoglutarate reductase/saccharopine dehydrogenase from developing soybean seeds. Miron, D., Ben-Yaacov, S., Reches, D., Schupper, A., Galili, G. Plant Physiol. (2000) [Pubmed]
  15. Characterization of the two saccharopine dehydrogenase isozymes of lysine catabolism encoded by the single composite AtLKR/SDH locus of Arabidopsis. Zhu, X., Tang, G., Galili, G. Plant Physiol. (2000) [Pubmed]
  16. Overall Kinetic Mechanism of Saccharopine Dehydrogenase from Saccharomyces cerevisiae. Xu, H., West, A.H., Cook, P.F. Biochemistry (2006) [Pubmed]
  17. The enzymology of lysine catabolism in rice seeds--isolation, characterization, and regulatory properties of a lysine 2-oxoglutarate reductase/saccharopine dehydrogenase bifunctional polypeptide. Gaziola, S.A., Teixeira, C.M., Lugli, J., Sodek, L., Azevedo, R.A. Eur. J. Biochem. (1997) [Pubmed]
  18. Biosynthetic and regulatory role of lys9 mutants of Saccharomyces cerevisiae. Winston, M.K., Bhattacharjee, J.K. Curr. Genet. (1987) [Pubmed]
  19. Novel chimeric spermidine synthase-saccharopine dehydrogenase gene (SPE3-LYS9) in the human pathogen Cryptococcus neoformans. Kingsbury, J.M., Yang, Z., Ganous, T.M., Cox, G.M., McCusker, J.H. Eukaryotic Cell (2004) [Pubmed]
  20. Biosynthesis of lysine in Rhodotorula glutinis: role of pipecolic acid. Kurtz, M., Bhattacharjee, J.K. J. Gen. Microbiol. (1975) [Pubmed]
  21. Inhibition of urea cycle enzymes by lysine and saccharopine. Ameen, M., Palmer, T. Biochem. Int. (1987) [Pubmed]
  22. Purification and characterization of saccharopine dehydrogenase from baker's yeast. Ogawa, H., Fujioka, M. J. Biol. Chem. (1978) [Pubmed]
  23. Cloning, expression, purification and crystallization of saccharopine reductase from Magnaporthe grisea. Johansson, E., Steffens, J.J., Emptage, M., Lindqvist, Y., Schneider, G. Acta Crystallogr. D Biol. Crystallogr. (2000) [Pubmed]
  24. Analysis of swainsonine and its early metabolic precursors in cultures of Metarhizium anisopliae. Sim, K.L., Perry, D. Glycoconj. J. (1997) [Pubmed]
 
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