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Gene Review

rsvA  -  Resolvase

Escherichia coli B171

 
 
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Disease relevance of rsvA

  • We studied the dynamics of site-specific recombination by the resolvase encoded by the Escherichia coli transposon Tn3 [1].
  • We obtained identical results for the decatenation of the products of two different site-specific recombination enzymes, phage lambda integrase and transposon Tn3 resolvase [2].
  • The resolvase partially complements the UV and hydroxyurea hypersensitivity and associated aberrant mitoses of an rqh1(-) mutant [3].
  • The broad-host-range plasmid pAM beta 1 from Gram-positive bacteria encodes a resolvase, designated Res beta, which shares homology with the proteins of the resolvase-invertase family [4].
  • The resolvase/invertase domain of the site-specific recombinase TnpX is functional and recognizes a target sequence that resembles the junction of the circular form of the Clostridium perfringens transposon Tn4451 [5].
 

High impact information on rsvA

  • Architecture of the gamma delta resolvase synaptosome: oriented heterodimers identity interactions essential for synapsis and recombination [6].
  • The 2,3' interaction between resolvase dimers is essential for synapsis and recombination [6].
  • In vitro recombination by Tn3 resolvase of plasmids containing two directly repeated recombination (res) sites generates two singly interlinked catenated rings [7].
  • A putative binding site may be located in the N-terminal portion of the TnpR (resolvase) structural gene sequences [8].
  • Examination of the Tn501 DNA sequence also reveals a potential tnpM coding sequence upstream of the Tn501 resolvase gene [8].
 

Chemical compound and disease context of rsvA

 

Biological context of rsvA

  • Immediately upstream of the bfp gene cluster, we identified a potential replication origin including genes that are predicted to encode proteins homologous with replicase and resolvase [11].
  • Substrate specificity of RusA resolvase reveals the DNA structures targeted by RuvAB and RecG in vivo [12].
  • To dissect the pathways of Holliday junction processing in a eukaryote, we have targeted an Escherichia coli Holliday junction resolvase to the nuclei of fission yeast recombination-deficient mutants and analysed their phenotypes [3].
  • Our results demonstrate the functional autonomy of the resolvase catalytic domain and open the way to creating "custom-built" recombinases that act at chosen natural target sequences [13].
  • The dif resolvase locus of the Escherichia coli chromosome can be replaced by a 33-bp sequence, but function depends on location [14].
 

Associations of rsvA with chemical compounds

  • The intermediate accumulates at low reaction temperatures and is stabilized by crosslinking of the resolvase protomers with glutaraldehyde [15].
  • Induction of the transcriptional fusions results in production of resolvase, which in turn, catalyzes excision of a linked tetracycline-resistance reporter gene flanked by direct repeats of res, the DNA sequences at which resolvase functions [16].
  • With one exception, where a glutamate residue had been replaced by leucine, the activity of these mutants was similar to that of wild-type Tn21 resolvase [17].
  • We propose a model for Tn4451 excision and insertion in which the resolvase/invertase domain of TnpX introduces 2-bp staggered cuts at these GA dinucleotides [5].
  • Tn1739tnpR is a derivative of Tn1721 with a chloramphenicol-resistance-encoding gene (CmR), the lambda cI repressor gene, and a further copy of the resolvase-encoding tnpR gene under control of the tac promoter [18].
 

Analytical, diagnostic and therapeutic context of rsvA

References

  1. Site-specific relaxation and recombination by the Tn3 resolvase: recognition of the DNA path between oriented res sites. Krasnow, M.A., Cozzarelli, N.R. Cell (1983) [Pubmed]
  2. Topoisomerase IV, not gyrase, decatenates products of site-specific recombination in Escherichia coli. Zechiedrich, E.L., Khodursky, A.B., Cozzarelli, N.R. Genes Dev. (1997) [Pubmed]
  3. Partial suppression of the fission yeast rqh1(-) phenotype by expression of a bacterial Holliday junction resolvase. Doe, C.L., Dixon, J., Osman, F., Whitby, M.C. EMBO J. (2000) [Pubmed]
  4. pAM beta 1 resolvase has an atypical recombination site and requires a histone-like protein HU. Petit, M.A., Ehrlich, D., Jannière, L. Mol. Microbiol. (1995) [Pubmed]
  5. The resolvase/invertase domain of the site-specific recombinase TnpX is functional and recognizes a target sequence that resembles the junction of the circular form of the Clostridium perfringens transposon Tn4451. Crellin, P.K., Rood, J.I. J. Bacteriol. (1997) [Pubmed]
  6. Architecture of the gamma delta resolvase synaptosome: oriented heterodimers identity interactions essential for synapsis and recombination. Murley, L.L., Grindley, N.D. Cell (1998) [Pubmed]
  7. Recombination site selection by Tn3 resolvase: topological tests of a tracking mechanism. Benjamin, H.W., Matzuk, M.M., Krasnow, M.A., Cozzarelli, N.R. Cell (1985) [Pubmed]
  8. tnpM: a novel regulatory gene that enhances Tn21 transposition and suppresses cointegrate resolution. Hyde, D.R., Tu, C.P. Cell (1985) [Pubmed]
  9. Evidence that phenylalanine 69 in Escherichia coli RuvC resolvase forms a stacking interaction during binding and destabilization of a Holliday junction DNA substrate. Yoshikawa, M., Iwasaki, H., Shinagawa, H. J. Biol. Chem. (2001) [Pubmed]
  10. Norfloxacin-induced DNA cleavage occurs at the dif resolvase locus in Escherichia coli and is the result of interaction with topoisomerase IV. Hojgaard, A., Szerlong, H., Tabor, C., Kuempel, P. Mol. Microbiol. (1999) [Pubmed]
  11. Enteropathogenic Escherichia coli: identification of a gene cluster coding for bundle-forming pilus morphogenesis. Sohel, I., Puente, J.L., Ramer, S.W., Bieber, D., Wu, C.Y., Schoolnik, G.K. J. Bacteriol. (1996) [Pubmed]
  12. Substrate specificity of RusA resolvase reveals the DNA structures targeted by RuvAB and RecG in vivo. Bolt, E.L., Lloyd, R.G. Mol. Cell (2002) [Pubmed]
  13. Chimeric recombinases with designed DNA sequence recognition. Akopian, A., He, J., Boocock, M.R., Stark, W.M. Proc. Natl. Acad. Sci. U.S.A. (2003) [Pubmed]
  14. The dif resolvase locus of the Escherichia coli chromosome can be replaced by a 33-bp sequence, but function depends on location. Tecklenburg, M., Naumer, A., Nagappan, O., Kuempel, P. Proc. Natl. Acad. Sci. U.S.A. (1995) [Pubmed]
  15. Isolation and characterization of the Tn3 resolvase synaptic intermediate. Benjamin, H.W., Cozzarelli, N.R. EMBO J. (1988) [Pubmed]
  16. Use of genetic recombination as a reporter of gene expression. Camilli, A., Beattie, D.T., Mekalanos, J.J. Proc. Natl. Acad. Sci. U.S.A. (1994) [Pubmed]
  17. Site-specific recombination by mutants of Tn21 resolvase with DNA recognition functions from Tn3 resolvase. Ackroyd, A.J., Avila, P., Parker, C.N., Halford, S.E. J. Mol. Biol. (1990) [Pubmed]
  18. A new lambda RES vector with a built-in Tn1721-encoded excision system. Altenbuchner, J. Gene (1993) [Pubmed]
  19. Analysis of conserved basic residues associated with DNA binding (Arg69) and catalysis (Lys76) by the RusA holliday junction resolvase. Bolt, E.L., Sharples, G.J., Lloyd, R.G. J. Mol. Biol. (2000) [Pubmed]
  20. Isolation and analysis of inhibitors of transposon Tn3 site-specific recombination. Fennewald, M.A., Capobianco, J. J. Bacteriol. (1984) [Pubmed]
 
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