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MeSH Review

Methylococcus

 
 
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Disease relevance of Methylococcus

  • Nitrosomonas europaea and Methylococcus capsulatus, which lack the functional enzyme, were found to contain the coding sequences for the E1 and E2 subunits of alpha-ketoglutarate dehydrogenase [1].
  • Hydrocarbon oxidations catalyzed by methane monooxygenase purified to high specific activity from the type II methanotroph Methylosinus trichosporium OB3b were compared to the same reactions catalyzed by methane monooxygenase from the type I methanotroph Methylococcus capsulatus Bath and liver microsomal cytochrome P-450 [2].
  • Examination of the genome sequence data for the proteobacterium Methylococcus capsulatus, a bacterial species known to produce sterol, revealed the presence of a single CYP with strong homology to CYP51, particularly to a form in Mycobacterium tuberculosis [3].
  • Identification of putative methanol dehydrogenase (moxF) structural genes in methylotrophs and cloning of moxF genes from Methylococcus capsulatus bath and Methylomonas albus BG8 [4].
 

High impact information on Methylococcus

  • The 2.2 A crystal structure of the 251K alpha 2 beta 2 gamma 2 dimeric hydroxylase protein of methane monooxygenase from Methylococcus capsulatus (Bath) reveals the geometry of the catalytic di-iron core [5].
  • The only unequivocal matches for a sterol biosynthetic pathway were in the proteobacterium, Methylococcus capsulatus, in which sterol biosynthesis is known, and in the planctomycete, Gemmata obscuriglobus [6].
  • The soluble methane monooxygenase (sMMO; EC 1.14.13.25) from the pseudothermophile Methylococcus capsulatus (Bath) is a three-component enzyme system that catalyzes the selective oxidation of methane to methanol [7].
  • Copper ions switch the oxidation of methane by soluble methane monooxygenase to particulate methane monooxygenase in Methylococcus capsulatus (Bath) [8].
  • A novel sterol 14alpha-demethylase/ferredoxin fusion protein (MCCYP51FX) from Methylococcus capsulatus represents a new class of the cytochrome P450 superfamily [3].
 

Chemical compound and disease context of Methylococcus

  • The hydroxylase protein from Methylococcus capsulatus (Bath) has been crystallized from aqueous solutions containing polyethylene glycol, lithium sulfate, and ammonium acetate [9].
  • In Methylococcus capsulatus the aminopentol and the aminotetrol were accompanied by their homologues possessing an extra methyl group at C-3 [10].
  • To investigate the role of protein cavities in facilitating movement of the substrates, methane and dioxygen, in the soluble methane monooxygenase hydroxylase (MMOH), we determined the X-ray structures of MMOH from Methylococcus capsulatus (Bath) cocrystallized with dibromomethane or iodoethane, or by using crystals pressurized with xenon gas [11].
  • Expression and characterization of ferredoxin and flavin adenine dinucleotide binding domains of the reductase component of soluble methane monooxygenase from Methylococcus capsulatus (Bath) [12].
  • NMR structure of the flavin domain from soluble methane monooxygenase reductase from Methylococcus capsulatus (Bath) [13].
 

Biological context of Methylococcus

  • Following the example set by studies of the mechanistic aspects of the substrate specificity of various cytochrome P-450 enzymes, we have undertaken a parallel investigation of the soluble methane monooxygenase from Methylococcus capsulatus (Bath) [14].
  • The ribulose-1,5-bisphosphate carboxylase/oxygenase gene cluster of Methylococcus capsulatus (Bath) [15].
  • Methylation analysis indicated that the average interior and exterior chain lengths of the polymer were 2.7 and 10.0 glucose units respectively and confirmed that the Methylococcus polyglucose is a branched polymer composed of units joined by 1 leads to 4 and 1 leads to 6 linkages [16].
 

Anatomical context of Methylococcus

 

Gene context of Methylococcus

  • Subsequent restriction analysis revealed that all three nif structural genes were contiguous in the Methylococcus genome in the order nifH, nifD and nifK, as found for the majority of other diazotrophs [19].
  • Three overlapping DNA fragments containing one of the copies of the gene encoding the 45-kDa pMMO polypeptide (pmoB) were cloned from Methylococcus capsulatus Bath [20].
  • One of them exhibited high identity to the mmoX protein of the Methylocystis-Methylosinus group, whereas the other showed an equal level of divergence from both the Methylosinus-Methylocystis group and Methylococcus capsulatus (Bath) and formed a distinct branch [21].
  • Cloning, sequencing and expression of the glutamine synthetase structural gene (glnA) from the obligate methanotroph Methylococcus capsulatus (Bath) [22].
  • Cytochrome P460 genes from the methanotroph Methylococcus capsulatus bath [23].
 

Analytical, diagnostic and therapeutic context of Methylococcus

References

  1. A challenge for 21st century molecular biology and biochemistry: what are the causes of obligate autotrophy and methanotrophy? Wood, A.P., Aurikko, J.P., Kelly, D.P. FEMS Microbiol. Rev. (2004) [Pubmed]
  2. Oxidation of deuterated compounds by high specific activity methane monooxygenase from Methylosinus trichosporium. Mechanistic implications. Rataj, M.J., Kauth, J.E., Donnelly, M.I. J. Biol. Chem. (1991) [Pubmed]
  3. A novel sterol 14alpha-demethylase/ferredoxin fusion protein (MCCYP51FX) from Methylococcus capsulatus represents a new class of the cytochrome P450 superfamily. Jackson, C.J., Lamb, D.C., Marczylo, T.H., Warrilow, A.G., Manning, N.J., Lowe, D.J., Kelly, D.E., Kelly, S.L. J. Biol. Chem. (2002) [Pubmed]
  4. Identification of putative methanol dehydrogenase (moxF) structural genes in methylotrophs and cloning of moxF genes from Methylococcus capsulatus bath and Methylomonas albus BG8. Stephens, R.L., Haygood, M.G., Lidstrom, M.E. J. Bacteriol. (1988) [Pubmed]
  5. Crystal structure of a bacterial non-haem iron hydroxylase that catalyses the biological oxidation of methane. Rosenzweig, A.C., Frederick, C.A., Lippard, S.J., Nordlund, P. Nature (1993) [Pubmed]
  6. Phylogenetic and biochemical evidence for sterol synthesis in the bacterium Gemmata obscuriglobus. Pearson, A., Budin, M., Brocks, J.J. Proc. Natl. Acad. Sci. U.S.A. (2003) [Pubmed]
  7. Structure of the soluble methane monooxygenase regulatory protein B. Walters, K.J., Gassner, G.T., Lippard, S.J., Wagner, G. Proc. Natl. Acad. Sci. U.S.A. (1999) [Pubmed]
  8. Quantitative proteomic analysis of metabolic regulation by copper ions in Methylococcus capsulatus (Bath). Kao, W.C., Chen, Y.R., Yi, E.C., Lee, H., Tian, Q., Wu, K.M., Tsai, S.F., Yu, S.S., Chen, Y.J., Aebersold, R., Chan, S.I. J. Biol. Chem. (2004) [Pubmed]
  9. Crystallization and preliminary X-ray analysis of the methane monooxygenase hydroxylase protein from Methylococcus capsulatus (Bath). Rosenzweig, A.C., Frederick, C.A., Lippard, S.J. J. Mol. Biol. (1992) [Pubmed]
  10. Novel hopanoids from the methylotrophic bacteria Methylococcus capsulatus and Methylomonas methanica. (22S)-35-aminobacteriohopane-30,31,32,33,34-pentol and (22S)-35-amino-3 beta-methylbacteriohopane-30,31,32,33,34-pentol. Neunlist, S., Rohmer, M. Biochem. J. (1985) [Pubmed]
  11. Xenon and halogenated alkanes track putative substrate binding cavities in the soluble methane monooxygenase hydroxylase. Whittington, D.A., Rosenzweig, A.C., Frederick, C.A., Lippard, S.J. Biochemistry (2001) [Pubmed]
  12. Expression and characterization of ferredoxin and flavin adenine dinucleotide binding domains of the reductase component of soluble methane monooxygenase from Methylococcus capsulatus (Bath). Blazyk, J.L., Lippard, S.J. Biochemistry (2002) [Pubmed]
  13. NMR structure of the flavin domain from soluble methane monooxygenase reductase from Methylococcus capsulatus (Bath). Chatwood, L.L., Müller, J., Gross, J.D., Wagner, G., Lippard, S.J. Biochemistry (2004) [Pubmed]
  14. Substrate specificity of soluble methane monooxygenase. Mechanistic implications. Green, J., Dalton, H. J. Biol. Chem. (1989) [Pubmed]
  15. The ribulose-1,5-bisphosphate carboxylase/oxygenase gene cluster of Methylococcus capsulatus (Bath). Baxter, N.J., Hirt, R.P., Bodrossy, L., Kovacs, K.L., Embley, T.M., Prosser, J.I., Murrell, J.C. Arch. Microbiol. (2002) [Pubmed]
  16. The occurrence and identification of intracellular polyglucose storage granules in Methylococcus NCIB 11083 grown in chemostat culture on methane. Linton, J.D., Cripps, R.E. Arch. Microbiol. (1978) [Pubmed]
  17. A continuous-wave electron-nuclear double resonance (X-band) study of the Cu2+ sites of particulate methane mono-oxygenase of Methylococcus capsulatus (strain M) in membrane and pure dopamine beta-mono-oxygenase of the adrenal medulla. Katterle, B., Gvozdev, R.I., Abudu, N., Ljones, T., Andersson, K.K. Biochem. J. (2002) [Pubmed]
  18. Outer membrane proteins of Methylococcus capsulatus (Bath). Fjellbirkeland, A., Kleivdal, H., Joergensen, C., Thestrup, H., Jensen, H.B. Arch. Microbiol. (1997) [Pubmed]
  19. Cloning of nitrogenase structural genes from the obligate methanotroph Methylococcus capsulatus (Bath). Oakley, C.J., Murrell, J.C. FEMS Microbiol. Lett. (1991) [Pubmed]
  20. Particulate methane monooxygenase genes in methanotrophs. Semrau, J.D., Chistoserdov, A., Lebron, J., Costello, A., Davagnino, J., Kenna, E., Holmes, A.J., Finch, R., Murrell, J.C., Lidstrom, M.E. J. Bacteriol. (1995) [Pubmed]
  21. Acidophilic methanotrophic communities from Sphagnum peat bogs. Dedysh, S.N., Panikov, N.S., Tiedje, J.M. Appl. Environ. Microbiol. (1998) [Pubmed]
  22. Cloning, sequencing and expression of the glutamine synthetase structural gene (glnA) from the obligate methanotroph Methylococcus capsulatus (Bath). Cardy, D.L., Murrell, J.C. J. Gen. Microbiol. (1990) [Pubmed]
  23. Cytochrome P460 genes from the methanotroph Methylococcus capsulatus bath. Bergmann, D.J., Zahn, J.A., Hooper, A.B., DiSpirito, A.A. J. Bacteriol. (1998) [Pubmed]
  24. Presence of methyl sterol and bacteriohopanepolyol in an outer-membrane preparation from Methylococcus capsulatus (Bath). Jahnke, L.L., Stan-Lotter, H., Kato, K., Hochstein, L.I. J. Gen. Microbiol. (1992) [Pubmed]
 
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