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MeSH Review

Yarrowia

 
 
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Disease relevance of Yarrowia

 

High impact information on Yarrowia

  • A "species barrier" prevents crosstransmission of the [PSI(+)] state between heterotypic Sup35p "prions." Kluyveromyces lactis and Yarrowia lipolytica Sup35 proteins, however, show interspecies [PSI(+)] transmissibility and susceptibility and a high spontaneous propagation rate [2].
  • The peroxin Pex24p of the yeast Yarrowia lipolytica exhibits high sequence similarity to two hypothetical proteins, Yhr150p and Ydr479p, encoded by the Saccharomyces cerevisiae genome [3].
  • Acyl-CoA oxidase is imported as a heteropentameric, cofactor-containing complex into peroxisomes of Yarrowia lipolytica [4].
  • The Sil1 protein appears widespread amongst eukaryotes, with homologues in Yarrowia lipolytica (Sls1p), Drosophila and mammals [5].
  • Here, we show that peroxisomal membrane fusion in the yeast Yarrowia lipolytica requires two AAA ATPases, Pex1p and Pex6p [6].
 

Biological context of Yarrowia

 

Anatomical context of Yarrowia

 

Associations of Yarrowia with chemical compounds

  • A phosphatidylinositol/phosphatidylcholine transfer protein is required for differentiation of the dimorphic yeast Yarrowia lipolytica from the yeast to the mycelial form [15].
  • When the alkane-assimilating yeast Yarrowia lipolytica is cultivated on n-alkanes, it changes cellular metabolism for adaptation by inducing cytochrome p450 and other genes [16].
  • Functional complementation of the oleic acid-nonutilizing strain mut1-1 of the yeast Yarrowia lipolytica has identified the novel gene, PEX24 [17].
  • Two aspartic acid residues in the PSST-homologous NUKM subunit of complex I from Yarrowia lipolytica are essential for catalytic activity [18].
  • Histidine 129 in the 75-kDa subunit of mitochondrial complex I from Yarrowia lipolytica is not a ligand for [Fe4S4] cluster N5 but is required for catalytic activity [19].
 

Gene context of Yarrowia

 

Analytical, diagnostic and therapeutic context of Yarrowia

  • Molecular cloning of YlPMR1, a S. cerevisiae PMR1 homologue encoding a novel P-type secretory pathway Ca2+ -ATPase, in the yeast Yarrowia lipolytica [24].
  • AIMS: To analyse the influence of nitrogen and carbon sources on extracellular lipase production by Yarrowia lipolytica-overproducing mutant in order to optimize its production in large-scale bioreactors [25].
  • The gene encoding human epidermal growth factor (hEGF) was expressed as a fusion protein with the leader peptide and pro I region of alkaline extracellular protease in the yeast Yarrowia lipolytica. hEGF was purified from culture supernatant by reverse-phase chromatography and analysed by Western-blot hybridisations [26].

References

  1. Cloning of the isocitrate lyase gene (ICL1) from Yarrowia lipolytica and characterization of the deduced protein. Barth, G., Scheuber, T. Mol. Gen. Genet. (1993) [Pubmed]
  2. Yeast [PSI+] "prions" that are crosstransmissible and susceptible beyond a species barrier through a quasi-prion state. Nakayashiki, T., Ebihara, K., Bannai, H., Nakamura, Y. Mol. Cell (2001) [Pubmed]
  3. YHR150w and YDR479c encode peroxisomal integral membrane proteins involved in the regulation of peroxisome number, size, and distribution in Saccharomyces cerevisiae. Vizeacoumar, F.J., Torres-Guzman, J.C., Tam, Y.Y., Aitchison, J.D., Rachubinski, R.A. J. Cell Biol. (2003) [Pubmed]
  4. Acyl-CoA oxidase is imported as a heteropentameric, cofactor-containing complex into peroxisomes of Yarrowia lipolytica. Titorenko, V.I., Nicaud, J.M., Wang, H., Chan, H., Rachubinski, R.A. J. Cell Biol. (2002) [Pubmed]
  5. LHS1 and SIL1 provide a lumenal function that is essential for protein translocation into the endoplasmic reticulum. Tyson, J.R., Stirling, C.J. EMBO J. (2000) [Pubmed]
  6. Peroxisomal membrane fusion requires two AAA family ATPases, Pex1p and Pex6p. Titorenko, V.I., Rachubinski, R.A. J. Cell Biol. (2000) [Pubmed]
  7. Overlapping reading frames at the LYS5 locus in the yeast Yarrowia lipolytica. Xuan, J.W., Fournier, P., Declerck, N., Chasles, M., Gaillardin, C. Mol. Cell. Biol. (1990) [Pubmed]
  8. Sls1p, an endoplasmic reticulum component, is involved in the protein translocation process in the yeast Yarrowia lipolytica. Boisramé, A., Beckerich, J.M., Gaillardin, C. J. Biol. Chem. (1996) [Pubmed]
  9. Peroxisome biogenesis occurs in an unsynchronized manner in close association with the endoplasmic reticulum in temperature-sensitive Yarrowia lipolytica Pex3p mutants. Bascom, R.A., Chan, H., Rachubinski, R.A. Mol. Biol. Cell (2003) [Pubmed]
  10. MHY1 encodes a C2H2-type zinc finger protein that promotes dimorphic transition in the yeast Yarrowia lipolytica. Hurtado, C.A., Rachubinski, R.A. J. Bacteriol. (1999) [Pubmed]
  11. A homologue of the 19 kDa signal recognition particle protein locus in Drosophila melanogaster. Lai, C., Langley, C.H. Gene (1997) [Pubmed]
  12. Sls1p stimulates Sec63p-mediated activation of Kar2p in a conformation-dependent manner in the yeast endoplasmic reticulum. Kabani, M., Beckerich, J.M., Gaillardin, C. Mol. Cell. Biol. (2000) [Pubmed]
  13. Distribution of the actin cytoskeleton during the cell cycle of Yarrowia lipolytica and the visualization of the tubulin cytoskeleton by immunofluorescence. Gausmann, U., Franzl, E., Kurischko, C. Yeast (1999) [Pubmed]
  14. Reactivation of the alternative oxidase of Yarrowia lipolytica by nucleoside monophosphates. Medentsev, A.G., Arinbasarova, A.Y., Akimenko, V.K. FEMS Yeast Res. (2004) [Pubmed]
  15. A phosphatidylinositol/phosphatidylcholine transfer protein is required for differentiation of the dimorphic yeast Yarrowia lipolytica from the yeast to the mycelial form. Lopez, M.C., Nicaud, J.M., Skinner, H.B., Vergnolle, C., Kader, J.C., Bankaitis, V.A., Gaillardin, C. J. Cell Biol. (1994) [Pubmed]
  16. A basic helix-loop-helix transcription factor essential for cytochrome p450 induction in response to alkanes in yeast Yarrowia lipolytica. Yamagami, S., Morioka, D., Fukuda, R., Ohta, A. J. Biol. Chem. (2004) [Pubmed]
  17. Yarrowia lipolytica cells mutant for the PEX24 gene encoding a peroxisomal membrane peroxin mislocalize peroxisomal proteins and accumulate membrane structures containing both peroxisomal matrix and membrane proteins. Tam, Y.Y., Rachubinski, R.A. Mol. Biol. Cell (2002) [Pubmed]
  18. Two aspartic acid residues in the PSST-homologous NUKM subunit of complex I from Yarrowia lipolytica are essential for catalytic activity. Garofano, A., Zwicker, K., Kerscher, S., Okun, P., Brandt, U. J. Biol. Chem. (2003) [Pubmed]
  19. Histidine 129 in the 75-kDa subunit of mitochondrial complex I from Yarrowia lipolytica is not a ligand for [Fe4S4] cluster N5 but is required for catalytic activity. Waletko, A., Zwicker, K., Abdrakhmanova, A., Zickermann, V., Brandt, U., Kerscher, S. J. Biol. Chem. (2005) [Pubmed]
  20. Sbh1p, a subunit of the Sec61 translocon, interacts with the chaperone calnexin in the yeast Yarrowia lipolytica. Boisramé, A., Chasles, M., Babour, A., Beckerich, J.M., Gaillardin, C. J. Cell. Sci. (2002) [Pubmed]
  21. Role of beta-oxidation enzymes in gamma-decalactone production by the yeast Yarrowia lipolytica. Waché, Y., Aguedo, M., Choquet, A., Gatfield, I.L., Nicaud, J.M., Belin, J.M. Appl. Environ. Microbiol. (2001) [Pubmed]
  22. Hexokinase regulates kinetics of glucose transport and expression of genes encoding hexose transporters in Saccharomyces cerevisiae. Petit, T., Diderich, J.A., Kruckeberg, A.L., Gancedo, C., Van Dam, K. J. Bacteriol. (2000) [Pubmed]
  23. Identification and characterisation of LIP7 and LIP8 genes encoding two extracellular triacylglycerol lipases in the yeast Yarrowia lipolytica. Fickers, P., Fudalej, F., Le Dall, M.T., Casaregola, S., Gaillardin, C., Thonart, P., Nicaud, J.M. Fungal Genet. Biol. (2005) [Pubmed]
  24. Molecular cloning of YlPMR1, a S. cerevisiae PMR1 homologue encoding a novel P-type secretory pathway Ca2+ -ATPase, in the yeast Yarrowia lipolytica. Park, C.S., Kim, J.Y., Crispino, C., Chang, C.C., Ryu, D.D. Gene (1998) [Pubmed]
  25. Carbon and nitrogen sources modulate lipase production in the yeast Yarrowia lipolytica. Fickers, P., Nicaud, J.M., Gaillardin, C., Destain, J., Thonart, P. J. Appl. Microbiol. (2004) [Pubmed]
  26. Production and secretion of biologically active human epidermal growth factor in Yarrowia lipolytica. Hamsa, P.V., Kachroo, P., Chattoo, B.B. Curr. Genet. (1998) [Pubmed]
 
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