The world's first wiki where authorship really matters (Nature Genetics, 2008). Due credit and reputation for authors. Imagine a global collaborative knowledge base for original thoughts. Search thousands of articles and collaborate with scientists around the globe.

wikigene or wiki gene protein drug chemical gene disease author authorship tracking collaborative publishing evolutionary knowledge reputation system wiki2.0 global collaboration genes proteins drugs chemicals diseases compound
Hoffmann, R. A wiki for the life sciences where authorship matters. Nature Genetics (2008)
 
Gene Review

metC  -  cystathionine beta-lyase

Escherichia coli UTI89

 
 
Welcome! If you are familiar with the subject of this article, you can contribute to this open access knowledge base by deleting incorrect information, restructuring or completely rewriting any text. Read more.
 

Disease relevance of metC

 

High impact information on metC

  • While the enzyme showed high gamma-lyase activity toward L-cystathionine (Km = 0.5 mM, Vmax = 2.5 units/mg) with an optimum pH of 8.2, no residual cystathionine beta-lyase behavior and only marginal reactivity toward L-cystine and L-cysteine were detected [6].
  • Aminoethoxyvinylglycine showed slow and tight binding characteristics with a Ki of 10.5 microM, comparable with its effect on cystathionine beta-lyase [6].
  • The region upstream of the beta-cystathionase (metC) gene in B. avium 197 lacked regulatory sequences ("Met boxes") described for metC in enteric species, and enzyme production was not repressed by methionine [7].
  • The three-dimensional structure of cystathionine beta-lyase from Arabidopsis was determined by Patterson search techniques, using the structure of tobacco (Nicotiana tabacum) cystathionine gamma-synthase as starting point [8].
  • The three-dimensional structure of cystathionine beta-lyase from Arabidopsis and its substrate specificity [8].
 

Chemical compound and disease context of metC

 

Biological context of metC

  • The chloramphenicol resistance determinant of a plasmid integrated at the ISP-I locus was mapped by PBS1 transduction and was found to be closely linked to metC (99.5%) [10].
  • Also, the overexpression of plasmid-encoded metC did not affect mal gene expression, nor did the deduced amino acid sequence of MetC show homology to that of MalY [11].
  • The encoded CmbR protein is homologous to the LysR family of regulator proteins and is an activator of the metC-cysK operon [4].
  • Other sulfur sources tested showed no significant effect on metC-cysK gene expression [4].
  • These mutations were mapped to a locus designated ctaA, located at 127 degrees between pyrD and metC on the B. subtilis chromosome [12].
 

Anatomical context of metC

 

Associations of metC with chemical compounds

  • In addition we found that O-acetyl-l-serine, the substrate of cysteine synthase, was an inducer of the metC-cysK operon [4].
  • The structure of the catalytic dimer and mode of PLP binding in Tnase resemble those found in aspartate amino-transferase, TPL, omega-amino acid pyruvate aminotransferase, dialkylglycine decarboxylase (DGD), cystathionine beta-lyase and ornithine decarboxylase [14].
  • Cystathionine beta-lyase (CBL) is a member of the gamma-family of pyridoxal-5'-phosphate (PLP)-dependent enzymes (Alexander et al., 1994) that cleave C(beta,gamma)-S bonds of a broad variety of substrates [15].
 

Analytical, diagnostic and therapeutic context of metC

  • Cloning, purification, and crystallization of Escherichia coli cystathionine beta-lyase [16].
  • A SDS-PAGE analysis identified a putative cystathionine beta-lyase band with approximate Mr of 41,000 that consisted of 368 amino acids encoded from ORF1 [3].

References

  1. Two transsulfurylation pathways in Klebsiella pneumoniae. Seiflein, T.A., Lawrence, J.G. J. Bacteriol. (2006) [Pubmed]
  2. Changes in active transport, intracellular adenosine 5'-triphosphate levels, macromolecular syntheses, and glycolysis in an energy-uncoupled mutant of Escherichia coli. Lieberman, M.A., Hong, J.S. J. Bacteriol. (1976) [Pubmed]
  3. Properties of the Corynebacterium glutamicum metC gene encoding cystathionine beta-lyase. Kim, J.W., Kim, H.J., Kim, Y., Lee, M.S., Lee, H.S. Mol. Cells (2001) [Pubmed]
  4. Regulation of the metC-cysK operon, involved in sulfur metabolism in Lactococcus lactis. Fernández, M., Kleerebezem, M., Kuipers, O.P., Siezen, R.J., van Kranenburg, R. J. Bacteriol. (2002) [Pubmed]
  5. Isolation of the patC gene encoding the cystathionine beta-lyase of Lactobacillus delbrueckii subsp. bulgaricus and molecular analysis of inter-strain variability in enzyme biosynthesis. Aubel, D., Germond, J.E., Gilbert, C., Atlan, D. Microbiology (Reading, Engl.) (2002) [Pubmed]
  6. Kinetics and inhibition of recombinant human cystathionine gamma-lyase. Toward the rational control of transsulfuration. Steegborn, C., Clausen, T., Sondermann, P., Jacob, U., Worbs, M., Marinkovic, S., Huber, R., Wahl, M.C. J. Biol. Chem. (1999) [Pubmed]
  7. Toxicity of Bordetella avium beta-cystathionase toward MC3T3-E1 osteogenic cells. Gentry-Weeks, C.R., Keith, J.M., Thompson, J. J. Biol. Chem. (1993) [Pubmed]
  8. The three-dimensional structure of cystathionine beta-lyase from Arabidopsis and its substrate specificity. Breitinger, U., Clausen, T., Ehlert, S., Huber, R., Laber, B., Schmidt, F., Pohl, E., Messerschmidt, A. Plant Physiol. (2001) [Pubmed]
  9. Accumulation of L-cystathionine by an Escherichia coli mutant deficient in cystathionine beta-lyase. Nishi, T., Tanaka, K., Tanaka, Y., Araki, K., Furihata, K., Onodera, M., Toda, K. J. Biosci. Bioeng. (2002) [Pubmed]
  10. Cloning and sequencing of the major intracellular serine protease gene of Bacillus subtilis. Koide, Y., Nakamura, A., Uozumi, T., Beppu, T. J. Bacteriol. (1986) [Pubmed]
  11. MalY of Escherichia coli is an enzyme with the activity of a beta C-S lyase (cystathionase). Zdych, E., Peist, R., Reidl, J., Boos, W. J. Bacteriol. (1995) [Pubmed]
  12. Isolation and sequence of ctaA, a gene required for cytochrome aa3 biosynthesis and sporulation in Bacillus subtilis. Mueller, J.P., Taber, H.W. J. Bacteriol. (1989) [Pubmed]
  13. Identification of odoriferous sulfanylalkanols in human axilla secretions and their formation through cleavage of cysteine precursors by a C-S lyase isolated from axilla bacteria. Natsch, A., Schmid, J., Flachsmann, F. Chem. Biodivers. (2004) [Pubmed]
  14. Crystal structure of tryptophanase. Isupov, M.N., Antson, A.A., Dodson, E.J., Dodson, G.G., Dementieva, I.S., Zakomirdina, L.N., Wilson, K.S., Dauter, Z., Lebedev, A.A., Harutyunyan, E.H. J. Mol. Biol. (1998) [Pubmed]
  15. Mode of action of cystathionine beta-lyase. Clausen, T., Laber, B., Messerschmidt, A. Biol. Chem. (1997) [Pubmed]
  16. Cloning, purification, and crystallization of Escherichia coli cystathionine beta-lyase. Laber, B., Clausen, T., Huber, R., Messerschmidt, A., Egner, U., Müller-Fahrnow, A., Pohlenz, H.D. FEBS Lett. (1996) [Pubmed]
 
WikiGenes - Universities