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PRDM2  -  PR domain containing 2, with ZNF domain

Homo sapiens

Synonyms: GATA-3-binding protein G3B, HUMHOXY1, KMT8, Lysine N-methyltransferase 8, MTB-ZF, ...
 
 
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Disease relevance of PRDM2

 

High impact information on PRDM2

 

Chemical compound and disease context of PRDM2

 

Biological context of PRDM2

 

Anatomical context of PRDM2

  • In contrast, RIZ2 expression was increased in patients with acute lymphoblastic leukaemia (eight out of 11, 73%), compared with normal bone marrow cells [12].
  • Screening a HeLa cell expression library with a probe designed with multiple repeats of this sequence resulted in the identification of a 1700-aa protein showing a complete homology with the product of the human retinoblastoma-interacting zinc-finger gene RIZ [13].
  • Of 30 matched body fluid samples, methylated RIZ1 DNA was found in 11 (37%) NP swabs, 9 (30%) M & T rinsing fluid, 7 (23%) plasma, and 3 (10%) buffy coat samples [14].
  • In this study, we examined mutations of two poly adenine tracts, A(8) and A(9), within the coding region of the RIZ gene, in MSI-high (MSI-H) primary cancers occurring in the pancreas, stomach, and colorectum [15].
  • Forced expression of RIZ1 protein induced growth arrest and death of HL60 cells [16].
 

Associations of PRDM2 with chemical compounds

  • RIZ1 is also a histone methyltransferase and methylates lysine 9 in histone H3 [17].
  • Treatment with the methylation inhibitor 5-aza-2'-deoxycytidine activated RIZ1 mRNA expression in cancer cells [5].
  • RIZ2 is generated by an internal promoter and lacks an NH2-terminal motif of RIZ1, the PR domain conserved in a subfamily of zinc finger genes that function as negative regulators of tumorigenesis [4].
  • Also, S-adenosylhomocysteine or methyl donor deficiency inhibits RIZ1 and other H3 lysine 9 methylation activities [18].
  • We performed in vitro studies comparing the abilities of RIZ1 P704 polymorphic variants (homozygous presence, P704+; absence, P704-; heterozygosity P704(+/-) of a proline at position 704) to coactivate the ERalpha and also examined the polymorphism associated to BMD of 343 Swedish women, aged 20-39 yr [19].
 

Physical interactions of PRDM2

  • Estrogen receptor was co-immunoprecipitated from MCF-7 cell extract by antibodies to RIZ protein and vice versa, thus indicating an existing interaction between these two proteins [13].
 

Regulatory relationships of PRDM2

 

Other interactions of PRDM2

  • A domain is conserved between RIZ and the PRDI-BF1/Blimp-1 differentiation factor [21].
  • A PRDM5 cDNA was isolated based on its homology to the PR domain of RIZ1 (PRDM2) [22].
  • Reducing RIZ1 level correlated with decreased induction of pS2 gene by estrogen in MCF7 cells [23].
  • However, a trend was observed: homozygotes for the rare alleles of the EHMT1, EHMT2 and PRDM2 had a mean value for both trimethylation of K9 and K27 of histone H3 remarkably different to the homozygotes for the common alleles [24].
  • Mapping of a minimal deleted region in human hepatocellular carcinoma to 1p36.13-p36.23 and mutational analysis of the RIZ (PRDM2) gene localized to the region [25].
 

Analytical, diagnostic and therapeutic context of PRDM2

References

  1. Tumor formation and inactivation of RIZ1, an Rb-binding member of a nuclear protein-methyltransferase superfamily. Steele-Perkins, G., Fang, W., Yang, X.H., Van Gele, M., Carling, T., Gu, J., Buyse, I.M., Fletcher, J.A., Liu, J., Bronson, R., Chadwick, R.B., de la Chapelle, A., Zhang, X., Speleman, F., Huang, S. Genes Dev. (2001) [Pubmed]
  2. Modulation of RIZ gene expression is associated to estradiol control of MCF-7 breast cancer cell proliferation. Gazzerro, P., Abbondanza, C., D'Arcangelo, A., Rossi, M., Medici, N., Moncharmont, B., Puca, G.A. Exp. Cell Res. (2006) [Pubmed]
  3. Decreased RIZ1 expression but not RIZ2 in hepatoma and suppression of hepatoma tumorigenicity by RIZ1. Jiang, G., Liu, L., Buyse, I.M., Simon, D., Huang, S. Int. J. Cancer (1999) [Pubmed]
  4. RIZ1, but not the alternative RIZ2 product of the same gene, is underexpressed in breast cancer, and forced RIZ1 expression causes G2-M cell cycle arrest and/or apoptosis. He, L., Yu, J.X., Liu, L., Buyse, I.M., Wang, M.S., Yang, Q.C., Nakagawara, A., Brodeur, G.M., Shi, Y.E., Huang, S. Cancer Res. (1998) [Pubmed]
  5. Hypermethylation in human cancers of the RIZ1 tumor suppressor gene, a member of a histone/protein methyltransferase superfamily. Du, Y., Carling, T., Fang, W., Piao, Z., Sheu, J.C., Huang, S. Cancer Res. (2001) [Pubmed]
  6. Genetic polymorphisms in the Rb-binding zinc finger gene RIZ and the risk of lung cancer. Yoon, K.A., Park, S., Hwangbo, B., Shin, H.D., Cheong, H.S., Shin, H.R., Lee, J.S. Carcinogenesis (2007) [Pubmed]
  7. The retinoblastoma-interacting zinc-finger protein RIZ is a downstream effector of estrogen action. Abbondanza, C., Medici, N., Nigro, V., Rossi, V., Gallo, L., Piluso, G., Belsito, A., Roscigno, A., Bontempo, P., Puca, A.A., Molinari, A.M., Moncharmont, B., Puca, G.A. Proc. Natl. Acad. Sci. U.S.A. (2000) [Pubmed]
  8. Candidate tumor suppressor RIZ is frequently involved in colorectal carcinogenesis. Chadwick, R.B., Jiang, G.L., Bennington, G.A., Yuan, B., Johnson, C.K., Stevens, M.W., Niemann, T.H., Peltomaki, P., Huang, S., de la Chapelle, A. Proc. Natl. Acad. Sci. U.S.A. (2000) [Pubmed]
  9. Detection of frameshift mutations of RIZ in gastric cancers with microsatellite instability. Pan, K.F., Lu, Y.Y., Liu, W.G., Zhang, L., You, W.C. World J. Gastroenterol. (2004) [Pubmed]
  10. Less cytotoxicity to combination therapy of 5-fluorouracil and cisplatin than 5-fluorouracil alone in human colon cancer cell lines. Chen, X.X., Lai, M.D., Zhang, Y.L., Huang, Q. World J. Gastroenterol. (2002) [Pubmed]
  11. Nucleotide alteration of retinoblastoma protein-interacting zinc finger gene, RIZ, in human leukemia. Sasaki, O., Meguro, K., Tohmiya, Y., Funato, T., Shibahara, S., Sasaki, T. Tohoku J. Exp. Med. (2002) [Pubmed]
  12. Altered expression of retinoblastoma protein-interacting zinc finger gene, RIZ, in human leukaemia. Sasaki, O., Meguro, K., Tohmiya, Y., Funato, T., Shibahara, S., Sasaki, T. Br. J. Haematol. (2002) [Pubmed]
  13. Identification of a DNA binding protein cooperating with estrogen receptor as RIZ (retinoblastoma interacting zinc finger protein). Medici, N., Abbondanza, C., Nigro, V., Rossi, V., Piluso, G., Belsito, A., Gallo, L., Roscigno, A., Bontempo, P., Puca, A.A., Molinari, A.M., Moncharmont, B., Puca, G.A. Biochem. Biophys. Res. Commun. (1999) [Pubmed]
  14. Detection of hypermethylated RIZ1 gene in primary tumor, mouth, and throat rinsing fluid, nasopharyngeal swab, and peripheral blood of nasopharyngeal carcinoma patient. Chang, H.W., Chan, A., Kwong, D.L., Wei, W.I., Sham, J.S., Yuen, A.P. Clin. Cancer Res. (2003) [Pubmed]
  15. RIZ, the retinoblastoma protein interacting zinc finger gene, is mutated in genetically unstable cancers of the pancreas, stomach, and colorectum. Sakurada, K., Furukawa, T., Kato, Y., Kayama, T., Huang, S., Horii, A. Genes Chromosomes Cancer (2001) [Pubmed]
  16. Differentiation of myeloid cell lines correlates with a selective expression of RIZ protein. Gazzerro, P., Bontempo, P., Schiavone, E.M., Abbondanza, C., Moncharmont, B., Armetta, I., Medici, N., De Simone, M., Nola, E., Puca, G.A., Molinari, A.M. Mol. Med. (2001) [Pubmed]
  17. Characterization of the PR domain of RIZ1 histone methyltransferase. Derunes, C., Briknarová, K., Geng, L., Li, S., Gessner, C.R., Hewitt, K., Wu, S., Huang, S., Woods, V.I., Ely, K.R. Biochem. Biophys. Res. Commun. (2005) [Pubmed]
  18. Inactivation of a histone methyltransferase by mutations in human cancers. Kim, K.C., Geng, L., Huang, S. Cancer Res. (2003) [Pubmed]
  19. A deletion polymorphism in the RIZ gene, a female sex steroid hormone receptor coactivator, exhibits decreased response to estrogen in vitro and associates with low bone mineral density in young Swedish women. Grundberg, E., Carling, T., Brändström, H., Huang, S., Ribom, E.L., Ljunggren, O., Mallmin, H., Kindmark, A. J. Clin. Endocrinol. Metab. (2004) [Pubmed]
  20. RIZ1 repression is associated with insulin-like growth factor-1 signaling activation in chronic myeloid leukemia cell lines. Pastural, E., Takahashi, N., Dong, W.F., Bainbridge, M., Hull, A., Pearson, D., Huang, S., Lowsky, R., DeCoteau, J.F., Geyer, C.R. Oncogene (2007) [Pubmed]
  21. The retinoblastoma protein binds to RIZ, a zinc-finger protein that shares an epitope with the adenovirus E1A protein. Buyse, I.M., Shao, G., Huang, S. Proc. Natl. Acad. Sci. U.S.A. (1995) [Pubmed]
  22. PRDM5 is silenced in human cancers and has growth suppressive activities. Deng, Q., Huang, S. Oncogene (2004) [Pubmed]
  23. A histone methyltransferase is required for maximal response to female sex hormones. Carling, T., Kim, K.C., Yang, X.H., Gu, J., Zhang, X.K., Huang, S. Mol. Cell. Biol. (2004) [Pubmed]
  24. Genetic variants in epigenetic genes and breast cancer risk. Cebrian, A., Pharoah, P.D., Ahmed, S., Ropero, S., Fraga, M.F., Smith, P.L., Conroy, D., Luben, R., Perkins, B., Easton, D.F., Dunning, A.M., Esteller, M., Ponder, B.A. Carcinogenesis (2006) [Pubmed]
  25. Mapping of a minimal deleted region in human hepatocellular carcinoma to 1p36.13-p36.23 and mutational analysis of the RIZ (PRDM2) gene localized to the region. Fang, W., Piao, Z., Simon, D., Sheu, J.C., Huang, S. Genes Chromosomes Cancer (2000) [Pubmed]
  26. The retinoblastoma interacting zinc finger gene RIZ produces a PR domain-lacking product through an internal promoter. Liu, L., Shao, G., Steele-Perkins, G., Huang, S. J. Biol. Chem. (1997) [Pubmed]
  27. Biallelic inactivation of the RIZ1 gene in human gastric cancer. Tokumaru, Y., Nomoto, S., Jerónimo, C., Henrique, R., Harden, S., Trink, B., Sidransky, D. Oncogene (2003) [Pubmed]
  28. Physical mapping of the retinoblastoma interacting zinc finger gene RIZ to D1S228 on chromosome 1p36. Buyse, I.M., Takahashi, E.I., Huang, S. Genomics (1996) [Pubmed]
 
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