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Hoffmann, R. A wiki for the life sciences where authorship matters. Nature Genetics (2008)
 
Gene Review

KRT88P  -  keratin 88 pseudogene

Homo sapiens

Synonyms: HBC, KRT122P, KRTHBP3
 
 
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Disease relevance of KRT122P

  • Inter- and intraspecies contamination of human breast tumor cell lines HBC and BrCa5 and other cell cultures [1].
  • These results suggest that HBC inhibits the cell cycle progression of colon cancer cells via antagonizing of Ca2+/CaM functions [2].
  • In the present study, we identified Ca2+/calmodulin (Ca2+/CaM) as a direct target protein of HBC using phage display biopanning [2].
  • BRCA1/2 mutations were found in 72 (52%) of 138 families with breast and ovarian cancer (HBOC), in 43 (13%) of the 339 families with breast cancer only (HBC), in 4 (36%) of 11 families with ovarian cancer only (HOC), and in nine of 29 families with one single young case (<40 years) of breast cancer [3].
  • Further work on ABL for HBS Ag and HBC Ag should enhance our understnading of immunologic responses to the antigens of the hepatitis B virus [4].
 

Psychiatry related information on KRT122P

  • HBC scored lower on general health, vitality, role-emotional, and mental health subscales of the Medical Outcomes Study (MOS) SF-36 than comparison group participants [5].
 

High impact information on KRT122P

  • It is shown that the two most recently reported cell lines derived from malignant human breast tissue, HBC and BrCa5 are, respectively, rat and HeLa cell contaminants [1].
  • In the HBC cell, 10 mM Ba2+ in the bath equally suppressed both delta VBK+ and delta VBNH4+, whereas in the LBC cell it suppressed delta VBK+ with a small effect on delta VBNH4+, indicating that NH4+ is transported via a pathway distinct from Ba(2+)-sensitive K+ conductance [6].
  • Three different, apparently disease-associated BRCA2 mutations were found in six HBC/HBOC families (8%): two splice site mutations in introns 5 and 21, and one frameshift mutation in exon 11 [7].
  • HBC (4-[3,5-Bis-[2-(4-hydroxy-3-methoxy-phenyl)-ethyl]-4,5-dihydro-pyrazol-1-yl]-benzoic acid) is a recently developed curcumin derivative which exhibits potent inhibitory activities against the proliferation of several tumor cell lines [2].
  • In biological systems, HBC induced prolonged phosphorylation of ERK1/2 and activated p21(WAF1) expression, resulting in the induction of G0/G1 cell cycle arrest in HCT15 colon cancer cells [2].
 

Chemical compound and disease context of KRT122P

 

Biological context of KRT122P

  • Interestingly preliminary results of a study addressing the presence of genomic rearrangements in HBC probands with BRCApro or IC prediction scores >/=95%, provided evidence for additional mutations undetectable with our conventional screening for point mutations [8].
  • We have previously shown that a subset of human osteoblast-like bone surface cells (HBC) derived from explants of trabecular bone constitutively express class II major histocompatibility complex (MHC) determinants in long-term culture [9].
  • This resembles properties known for the two types of cone synapses in lower species, in which the sign-preserving HBC/HzC synapse has faster kinetics but probably lower gain than the slower sign-inverting G-protein coupled DBC synapse [10].
 

Anatomical context of KRT122P

  • This study demonstrates that the use of HBC with a lower anticoagulation protocol in primary coronary artery bypass grafting safely and effectively reduces the incidence and magnitude of homologous transfusion, the duration of ventilation, and surgical intensive care unit and hospital stays [11].
  • We examined the contribution of these hyperpolarizing second-order retinal cells to the photopic ERG of monkey by applying glutamate analogs to suppress photoreceptor transmission selectively to HBC/HzCs vs. DBCs [10].
  • We now examine the capacity of HBC to stimulate allogeneic and autologous peripheral blood mononuclear cells (PBMC) and to function as antigen-presenting cells (APC) [9].
  • These indirect bipolar cell inputs are likely to be mediated by a subpopulation of amacrine cells that exhibit transient hyperpolarizing light responses (AC(H)s) and make GABAergic/glycinergic synapses on DBC or HBC axon terminals [12].
  • One clone was able to recognize antigenic differences among tissue-nonspecific type ALPs in addition to intestinal and placental ALPs; it reacted favorably with ALPs from HBC, human bone, kidney and dental pulp, but not with human liver enzyme [13].
 

Associations of KRT122P with chemical compounds

  • Overall, plasma triglyceride concentration was a better predictor for HBC than was the plasma concentration of phylloquinone [14].
  • In this work, trimethylammonium salts of undecachlorinated (UCC), undecabrominated (UBC), hexabrominated (HBC), and undecaiodinated (UIC) carborane anions were prepared and evaluated for their potential use in solvent polymeric membrane-based sensors [15].
  • In addition, the high affinity irOC levels expressed as a percentage (hydroxyapatite binding capacity, HBC) were 5.12% (95% C.I. 1.32 to 8.92) lower in women with calcifications [16].
  • A prospective randomized trial was undertaken to test the hypothesis that "tip-to-tip" heparin-bonded cardiopulmonary bypass circuits (HBC) can further enhance blood conservation and clinical outcomes in patients undergoing primary coronary artery bypass grafting [11].
  • With the measured variables, there appears to be no significant difference between STD or HBC amino acids when used as part of parenteral nutrition in injured patients [17].
 

Analytical, diagnostic and therapeutic context of KRT122P

  • To this end, 71 breast and breast-ovarian cancer (HBC/HBOC) families along with 95 control individuals from a wide range of ethnicities were analyzed by means of denaturing high-performance liquid chromatography (DHPLC) and direct sequence analysis [7].
  • HBC consistently stimulated a strong proliferative response in allogeneic PBMC after 6 days co-culture [9].
  • Seventy-five patients with an abdominal trauma index (ATI) greater than 15 and less than 40 were randomized at initial laparotomy to receive either TEN (Vivonex TEN) or TPN (Freamine HBC 6.9% and Trophamine 6%); both regimens contained 2.5% fat, 33% branched chain amino acids, and had a calorie to nitrogen ratio of 150:1 [18].
  • CONCLUSION: Use of HBC in proximal aortic surgery resulted in reduced bleeding and blood transfusion, improving clinical outcomes [19].
  • Compared with CONV, use of HBC was associated with decreased mortality (3% vs 18%, p = 0.004), reoperation for bleeding (7% vs 24%, p = 0.005), and hospital length of hospital stay (10 +/- 11 vs 20 +/- 30 days, p = 0.002) [19].

References

  1. Inter- and intraspecies contamination of human breast tumor cell lines HBC and BrCa5 and other cell cultures. Nelson-Rees, W.A., Flandermeyer, R.R. Science (1977) [Pubmed]
  2. A new curcumin derivative, HBC, interferes with the cell cycle progression of colon cancer cells via antagonization of the Ca2+/calmodulin function. Shim, J.S., Lee, J., Park, H.J., Park, S.J., Kwon, H.J. Chem. Biol. (2004) [Pubmed]
  3. Large regional differences in the frequency of distinct BRCA1/BRCA2 mutations in 517 Dutch breast and/or ovarian cancer families. Verhoog, L.C., van den Ouweland, A.M., Berns, E., van Veghel-Plandsoen, M.M., van Staveren, I.L., Wagner, A., Bartels, C.C., Tilanus-Linthorst, M.M., Devilee, P., Seynaeve, C., Halley, D.J., Niermeijer, M.F., Klijn, J.G., Meijers-Heijboer, H. Eur. J. Cancer (2001) [Pubmed]
  4. Immunologic mechanisms in hepatitis B assayed by antigen-binding lymphocytes. Vyas, G.N., Roberts, I., MacKay, I.R., Gust, I.D. Am. J. Med. Sci. (1975) [Pubmed]
  5. Quality of life of husbands of women with breast cancer. Wagner, C.D., Bigatti, S.M., Storniolo, A.M. Psycho-oncology. (2006) [Pubmed]
  6. Cellular heterogeneity of ammonium ion transport across the basolateral membrane of the hamster medullary thick ascending limb of Henle's loop. Tsuruoka, S., Takeda, M., Yoshitomi, K., Imai, M. J. Clin. Invest. (1993) [Pubmed]
  7. Global sequence diversity of BRCA2: analysis of 71 breast cancer families and 95 control individuals of worldwide populations. Wagner, T.M., Hirtenlehner, K., Shen, P., Moeslinger, R., Muhr, D., Fleischmann, E., Concin, H., Doeller, W., Haid, A., Lang, A.H., Mayer, P., Petru, E., Ropp, E., Langbauer, G., Kubista, E., Scheiner, O., Underhill, P., Mountain, J., Stierer, M., Zielinski, C., Oefner, P. Hum. Mol. Genet. (1999) [Pubmed]
  8. BRCA1 and BRCA2 genetic testing in Italian breast and/or ovarian cancer families: mutation spectrum and prevalence and analysis of mutation prediction models. Capalbo, C., Ricevuto, E., Vestri, A., Ristori, E., Sidoni, T., Buffone, O., Adamo, B., Cortesi, E., Marchetti, P., Scambia, G., Tomao, S., Rinaldi, C., Zani, M., Ferraro, S., Frati, L., Screpanti, I., Gulino, A., Giannini, G. Ann. Oncol. (2006) [Pubmed]
  9. Human osteoblast-like cells expressing MHC class II determinants stimulate allogeneic and autologous peripheral blood mononuclear cells and function as antigen-presenting cells. Skjødt, H., Møller, T., Freiesleben, S.F. Immunology (1989) [Pubmed]
  10. Push-pull model of the primate photopic electroretinogram: a role for hyperpolarizing neurons in shaping the b-wave. Sieving, P.A., Murayama, K., Naarendorp, F. Vis. Neurosci. (1994) [Pubmed]
  11. Heparin-bonded circuits with a reduced anticoagulation protocol in primary CABG: a prospective, randomized study. Aldea, G.S., Doursounian, M., O'Gara, P., Treanor, P., Shapira, O.M., Lazar, H.L., Shemin, R.J. Ann. Thorac. Surg. (1996) [Pubmed]
  12. Cross-talk between ON and OFF channels in the salamander retina: Indirect bipolar cell inputs to ON-OFF ganglion cells. Pang, J.J., Gao, F., Wu, S.M. Vision Res. (2007) [Pubmed]
  13. Immunological differentiation of human tissue-nonspecific type alkaline phosphatases by a monoclonal antibody to the enzyme of human osteoblast-like cells. Goseki, M., Oida, S., Ogata, Y., Sasaki, S. Bull. Tokyo Med. Dent. Univ. (1995) [Pubmed]
  14. Phylloquinone transport and its influence on gamma-carboxyglutamate residues of osteocalcin in patients on maintenance hemodialysis. Saupe, J., Shearer, M.J., Kohlmeier, M. Am. J. Clin. Nutr. (1993) [Pubmed]
  15. Ion-pairing ability, chemical stability, and selectivity behavior of halogenated dodecacarborane cation exchangers in neutral carrier-based ion-selective electrodes. Peper, S., Qin, Y., Almond, P., McKee, M., Telting-Diaz, M., Albrecht-Schmitt, T., Bakker, E. Anal. Chem. (2003) [Pubmed]
  16. Vitamin K intake and osteocalcin levels in women with and without aortic atherosclerosis: a population-based study. Jie, K.S., Bots, M.L., Vermeer, C., Witteman, J.C., Grobbee, D.E. Atherosclerosis (1995) [Pubmed]
  17. Use of selected visceral protein measurements in the comparison of branched-chain amino acids with standard amino acids in parenteral nutrition support of injured patients. Kuhl, D.A., Brown, R.O., Vehe, K.L., Boucher, B.A., Luther, R.W., Kudsk, K.A. Surgery (1990) [Pubmed]
  18. TEN versus TPN following major abdominal trauma--reduced septic morbidity. Moore, F.A., Moore, E.E., Jones, T.N., McCroskey, B.L., Peterson, V.M. The Journal of trauma. (1989) [Pubmed]
  19. Heparin-bonded cardiopulmonary bypass circuits reduce bleeding and transfusion requirements in proximal aortic surgery. Shapira, O.M., O'Gara, P., Roy-Cutter, S., Lazar, H.L., Shemin, R.J. Journal of cardiac surgery. (2000) [Pubmed]
 
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