The world's first wiki where authorship really matters (Nature Genetics, 2008). Due credit and reputation for authors. Imagine a global collaborative knowledge base for original thoughts. Search thousands of articles and collaborate with scientists around the globe.

wikigene or wiki gene protein drug chemical gene disease author authorship tracking collaborative publishing evolutionary knowledge reputation system wiki2.0 global collaboration genes proteins drugs chemicals diseases compound
Hoffmann, R. A wiki for the life sciences where authorship matters. Nature Genetics (2008)
 

Links

 

Gene Review

MT-ND5  -  mitochondrially encoded NADH dehydrogenase 5

Homo sapiens

Synonyms: MTND5, NAD5, NADH dehydrogenase subunit 5, NADH dehydrogenase, subunit 5 (complex I), NADH-ubiquinone oxidoreductase chain 5, ...
 
 
Welcome! If you are familiar with the subject of this article, you can contribute to this open access knowledge base by deleting incorrect information, restructuring or completely rewriting any text. Read more.
 

Disease relevance of MT-ND5

 

High impact information on MT-ND5

  • In 70% of the mtDNA of this Pearson cell line a deletion from within the COX II gene to within the ND5 gene was present [5].
  • The role of the ND5 gene in LHON: characterization of a new, heteroplasmic LHON mutation [6].
  • Most such cases have been assumed to be caused by nuclear gene defects, but recently an increasing number have been shown to be caused by mutations in the mitochondrially encoded complex I subunit genes ND4, ND5, and ND6 [7].
  • Two mitochondrial DNA mutations in complex I subunit genes, G14459A in ND6, and T12706C in ND5, have been associated with complex I deficiency and LD [8].
  • Our observations add to the evidence that mitochondrial ND5 protein coding gene mutations frequently associate with the MELAS phenotype, and it highlights the role of complex I dysfunction in MELAS [9].
 

Biological context of MT-ND5

  • In contrast, a remarkable upregulation of ND5 expression (200-fold) was observed in a hyperadherent icmF insertion mutant with reduced motility [1].
  • Using RNA arbitrarily primed PCR, ND5 a mitochondria encoded subunit of complex I of the mitochondrial respiratory chain was found to be upregulated in the human intestinal epithelial cell line Int407 following exposure to V. cholerae [1].
  • Infection of the monolayer with aflagellate non-motile mutant of V. cholerae O395 showed a very significant (59-fold) downregulation of ND5 [1].
  • Thus, infection of Int407 with virulence mutant strains of V. cholerae revealed that the ND5 expression is modulated by the virulence of V. cholerae in a ToxT independent manner [1].
  • We prospectively evaluated low frequency, amino acid changing, heteroplasmic mutations in a narrow region of ND5, a mitochondrial gene encoding a complex I subunit, in brain tissue from PD and controls [2].
 

Anatomical context of MT-ND5

 

Associations of MT-ND5 with chemical compounds

  • A second individual harbored a novel substitution of threonine with serine at position 536 of the ND5 protein [13].
  • Consequently, there is a 30-35% reduction in the electron flow through Complex I compared with that through Complex II, and an increased lactate/pyruvate ratio, in the ND1 and ND4 mutants, but these factors were unaffected in the secondary ND5 mutants [14].
  • In patient 2, a 9-bp directly repeated sequence of 5'-ACCTCCCTC-3' (where A = adenine, C = cytosine, and T = thymine) was found at the boundaries of a deleted segment spanning 7221 bp between the CO1 and ND5 genes [15].
  • Two regions of the mtDNA of Atlantic herring (Clupea harengus), ND3/4 and ND5/6, were surveyed by RFLP analysis to assess the effects of marker variability on the power of statistical tests [16].
  • We identified a heteroplasmic and a homoplasmic SNP at codon 507 in the subunit 5 (MTND5) of complex I. The heteroplasmic haplotype I-specific valine to methionine substitution represents a nonconservative amino acid change and was found in 11 myelopathic and eight non-myelopathic cheetahs with levels ranging from 29% to 79% [17].
 

Physical interactions of MT-ND5

  • A novel mtDNA mutation in the ND5 subunit of complex I in two MELAS patients [18].
 

Other interactions of MT-ND5

  • Four replacement mutations restricted only to LHON families were found, one in the ND1 gene at nt 4025, and three in the ND5 gene at nt 12,811, 13,637, and 13,967 [19].
  • One proband had a non-synonymous A14062G mutation in the ND5 gene and the other had a non-synonymous G15221A mutation in the cytochrome b gene and a T1391C mutation in the 12S ribosomal RNA gene, whose importance in disease expression remains to be clarified [20].
  • Is the mitochondrial complex I ND5 gene a hot-spot for MELAS causing mutations [9]?
  • In one patient, only genes of ND5, ND4L as well as tRNA(Leu(CUN)), tRNA(Ser(AGY)), and tRNA(His) were deleted [21].
  • Tissue specimens from four species of Neotropical small cats (Oncifelis geoffroyi, N = 38; O. guigna, N = 6; Leopardus tigrinus, N = 32; Lynchailurus colocolo, N = 22) collected from throughout their distribution were examined for patterns of DNA sequence variation using three mitochondrial genes, 16S rRNA, ATP8, and NADH-5 [22].
 

Analytical, diagnostic and therapeutic context of MT-ND5

  • Sequence analysis of cardiac mtDNA revealed 4 patients harbouring heteroplasmic mtDNA mutations in cytb, tRNAArg, and ND5 at highly conserved positions [23].
  • Antibodies raised against an internal peptide close to the N-terminus of the ND5 subunit and antibodies raised against an internal epitope of the ND6 subunit also reacted in both the immunoblotting and immunoprecipitation assays [24].
  • Genealogical trees have been constructed using mitochondrial ND5 gene sequences of 78 Damaster (s. str.) specimens from all over the Japanese Islands. Eight lineages (called races in this paper) have been recognized [25].

References

  1. Upregulation of human mitochondrial NADH dehydrogenase subunit 5 in intestinal epithelial cells is modulated by Vibrio cholerae pathogenesis. Sarkar, M., Das, S., Bandyopadhaya, A., Ray, K., Chaudhuri, K. FEBS Lett. (2005) [Pubmed]
  2. Mitochondrial ND5 mutations in idiopathic Parkinson's disease. Parker, W.D., Parks, J.K. Biochem. Biophys. Res. Commun. (2005) [Pubmed]
  3. Mitochondrial DNA sequence analysis of four Alzheimer's and Parkinson's disease patients. Brown, M.D., Shoffner, J.M., Kim, Y.L., Jun, A.S., Graham, B.H., Cabell, M.F., Gurley, D.S., Wallace, D.C. Am. J. Med. Genet. (1996) [Pubmed]
  4. Atypical Leigh syndrome associated with the D393N mutation in the mitochondrial ND5 subunit. Petruzzella, V., Di Giacinto, G., Scacco, S., Piemonte, F., Torraco, A., Carrozzo, R., Vergari, R., Dionisi-Vici, C., Longo, D., Tessa, A., Papa, S., Bertini, E. Neurology (2003) [Pubmed]
  5. The relationship between mitochondrial genotype and mitochondrial phenotype in lymphoblasts with a heteroplasmic mtDNA deletion. Spelbrink, J.N., Van Oost, B.A., Van den Bogert, C. Hum. Mol. Genet. (1994) [Pubmed]
  6. The role of the ND5 gene in LHON: characterization of a new, heteroplasmic LHON mutation. Mayorov, V., Biousse, V., Newman, N.J., Brown, M.D. Ann. Neurol. (2005) [Pubmed]
  7. De novo mutations in the mitochondrial ND3 gene as a cause of infantile mitochondrial encephalopathy and complex I deficiency. McFarland, R., Kirby, D.M., Fowler, K.J., Ohtake, A., Ryan, M.T., Amor, D.J., Fletcher, J.M., Dixon, J.W., Collins, F.A., Turnbull, D.M., Taylor, R.W., Thorburn, D.R. Ann. Neurol. (2004) [Pubmed]
  8. Low mutant load of mitochondrial DNA G13513A mutation can cause Leigh's disease. Kirby, D.M., Boneh, A., Chow, C.W., Ohtake, A., Ryan, M.T., Thyagarajan, D., Thorburn, D.R. Ann. Neurol. (2003) [Pubmed]
  9. Is the mitochondrial complex I ND5 gene a hot-spot for MELAS causing mutations? Liolitsa, D., Rahman, S., Benton, S., Carr, L.J., Hanna, M.G. Ann. Neurol. (2003) [Pubmed]
  10. The mitochondrial DNA G13513A transition in ND5 is associated with a LHON/MELAS overlap syndrome and may be a frequent cause of MELAS. Pulkes, T., Eunson, L., Patterson, V., Siddiqui, A., Wood, N.W., Nelson, I.P., Morgan-Hughes, J.A., Hanna, M.G. Ann. Neurol. (1999) [Pubmed]
  11. Identification of a novel mutation in the mtDNA ND5 gene associated with MELAS. Santorelli, F.M., Tanji, K., Kulikova, R., Shanske, S., Vilarinho, L., Hays, A.P., DiMauro, S. Biochem. Biophys. Res. Commun. (1997) [Pubmed]
  12. Structure and expression of the overlapping ND4L and ND5 genes of Neurospora crassa mitochondria. Nelson, M.A., Macino, G. Mol. Gen. Genet. (1987) [Pubmed]
  13. Mitochondrial DNA mutations in patients with orthostatic hypotension. Schwartz, F., Baldwin, C.T., Baima, J., Gavras, H. Am. J. Med. Genet. (1999) [Pubmed]
  14. Catalytic activity of complex I in cell lines that possess replacement mutations in the ND genes in Leber's hereditary optic neuropathy. Majander, A., Finel, M., Savontaus, M.L., Nikoskelainen, E., Wikström, M. Eur. J. Biochem. (1996) [Pubmed]
  15. Detection of platelet mitochondrial DNA deletions in Kearns-Sayre syndrome. Ota, Y., Tanaka, M., Sato, W., Ohno, K., Yamamoto, T., Maehara, M., Negoro, T., Watanabe, K., Awaya, S., Ozawa, T. Invest. Ophthalmol. Vis. Sci. (1991) [Pubmed]
  16. Haplotype frequency distribution and discriminatory power of two mtDNA fragments in a marine pelagic teleost (Atlantic herring, Clupea harengus). Hauser, L., Turan, C., Carvalho, G.R. Heredity (2001) [Pubmed]
  17. Analysis of the mitochondrial genome of cheetahs (Acinonyx jubatus) with neurodegenerative disease. Burger, P.A., Steinborn, R., Walzer, C., Petit, T., Mueller, M., Schwarzenberger, F. Gene (2004) [Pubmed]
  18. A novel mtDNA mutation in the ND5 subunit of complex I in two MELAS patients. Corona, P., Antozzi, C., Carrara, F., D'Incerti, L., Lamantea, E., Tiranti, V., Zeviani, M. Ann. Neurol. (2001) [Pubmed]
  19. The spectrum of mitochondrial DNA mutations in families with Leber hereditary optic neuroretinopathy. Huoponen, K., Lamminen, T., Juvonen, V., Aula, P., Nikoskelainen, E., Savontaus, M.L. Hum. Genet. (1993) [Pubmed]
  20. Atypical muscle pathology and a survey of cis-mutations in deaf patients harboring a 1555 A-to-G point mutation in the mitochondrial ribosomal RNA gene. Yamasoba, T., Goto, Y., Oka, Y., Nishino, I., Tsukuda, K., Nonaka, I. Neuromuscul. Disord. (2002) [Pubmed]
  21. Mitochondrial respiratory rates and activities of respiratory chain complexes correlate linearly with heteroplasmy of deleted mtDNA without threshold and independently of deletion size. Gellerich, F.N., Deschauer, M., Chen, Y., Müller, T., Neudecker, S., Zierz, S. Biochim. Biophys. Acta (2002) [Pubmed]
  22. Disparate phylogeographic patterns of molecular genetic variation in four closely related South American small cat species. Johnson, W.E., Slattery, J.P., Eizirik, E., Kim, J.H., Raymond, M.M., Bonacic, C., Cambre, R., Crawshaw, P., Nunes, A., Seuánez, H.N., Moreira, M.A., Seymour, K.L., Simon, F., Swanson, W., O'Brien, S.J. Mol. Ecol. (1999) [Pubmed]
  23. Biochemical and molecular basis for mitochondrial cardiomyopathy in neonates and children. Marin-Garcia, J., Ananthakrishnan, R., Goldenthal, M.J., Pierpont, M.E. J. Inherit. Metab. Dis. (2000) [Pubmed]
  24. Multiple deficiencies of mitochondrial DNA- and nuclear-encoded subunits of respiratory NADH dehydrogenase detected with peptide- and subunit-specific antibodies in mitochondrial myopathies. Bentlage, H.A., Janssen, A.J., Chomyn, A., Attardi, G., Walker, J.E., Schägger, H., Sengers, R.C., Trijbels, F.J. Biochim. Biophys. Acta (1995) [Pubmed]
  25. Origin and diversification of hindwingless Damaster ground beetles within the Japanese islands as deduced from mitochondrial ND5 gene sequences (Coleoptera, Carabidae). Su, Z.H., Tominaga, O., Okamoto, M., Osawa, S. Mol. Biol. Evol. (1998) [Pubmed]
 
WikiGenes - Universities