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COPE  -  coatomer protein complex, subunit epsilon

Homo sapiens

Synonyms: Coatomer subunit epsilon, Epsilon-COP, Epsilon-coat protein, epsilon-COP
 
 
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Disease relevance of COPE

  • Flavivirus Infection Activates the XBP1 Pathway of the Unfolded Protein Response To Cope with Endoplasmic Reticulum Stress [1].
  • Haemophilus ducreyi 35000HP contains two genes, lspA1 and lspA2, whose predicted protein products have molecular weights of 456,000 and 543,000, respectively (C. K. Ward, S. R. Lumbley, J. L. Latimer, L. D. Cope, and E. J. Hansen, J. Bacteriol. 180:6013-6022, 1998) [2].
  • A 20Fr red rubber catheter or an 8.5Fr Cope loop was placed into the diverticulum [3].
  • The UspA1 protein of Moraxella catarrhalis has been shown to function as an adhesin that mediates adherence to human epithelial cell lines in vitro (E. R. Lafontaine, L. D. Cope, C. Aebi, J. L. Latimer, G. H. McCracken, Jr., and E. J. Hansen, J. Bacteriol. 182:1364-1373, 2000) [4].
  • We describe five patients in whom the diagnosis of pleural amyloidosis was established by Cope needle biopsy during evaluation of pleural effusions of indeterminate cause [5].
 

Psychiatry related information on COPE

  • METHODS: The coping strategies were investigated using the Dental Cope Questionnaire (n = 597); the level of dental fear was assessed using the Children's Fear Survey Schedule (CFSS-DS); a question is asked whether a child had experienced pain at the dentist in the past and dental caries was assessed using the DMFS index [6].
  • Message for caregivers of dementia with Lewy bodies patients: hallucinations can be pleasurable for your patient. Cope with your embarrassment and empathize [7].
  • A much higher percentage (91%) were restricted under the powers of s.41 of the Mental Health Act 1983, compared to 69% in the West Midlands study (Cope and Ward, 1993) [8].
 

High impact information on COPE

  • We report the link between the rapid appearance of a pathogenic chytrid fungus Batrachochytrium dendrobatidis in an amphibian community at El Copé, Panama, and subsequent mass mortality and loss of amphibian biodiversity across eight families of frogs and salamanders [9].
  • In the substituted system, stereoelectronic effects of the trialkylsiloxy group regulate torquoselectivity in the bond-breaking processes and this, combined with low barriers to cyclization, leads to a stepwise Cope rearrangement that is, nevertheless, stereoselective [10].
  • The key step is a C-H functionalization process, the combined C-H activation/Cope rearrangement, between methyl (E)-2-diazo-3-pentenoate and 1-methyl-1,2-dihydronaphthalenes [11].
  • When the reaction is catalyzed by dirhodium tetrakis((R)-(N-dodecylbenzenesulfonyl)prolinate), Rh(2)(R-DOSP)(4), an enantiomer differentiation step occurs where one enantiomer of the dihydronaphthalene undergoes the combined C-H activation/Cope rearrangement while the other undergoes cyclopropanation [11].
  • The Cope elimination reactions for threo- and erythro-N,N-dimethyl-3-phenyl-2-butylamine oxide have been investigated using QM/MM calculations in water, THF, and DMSO [12].
 

Chemical compound and disease context of COPE

  • We describe a case of massive hemoptysis, secondary to an intracavitary aspergilloma, successfully treated by computed tomography (CT)-guided placement of a Cope-loop catheter with daily transcatheter instillation of amphotericin B and cavitary irrigation [13].
 

Biological context of COPE

  • The quaternary stereocenter is created through a new synthetic sequence involving three reactions: the enantioselective Birch reduction-allylation, enol ether hydrolysis, and the Cope rearrangement [14].
  • Only at high pH does the Cope rearrangement compete with decarboxylation [15].
  • The synthesis involved the following successive steps: epoxidation of the double bond in 5, opening of the epoxides with dimethylamine, Cope degradation of the dimethyl-amino derivatives, and hydroxylation of the double bond in the tert-butyl hex-3-enuronates [16].
 

Anatomical context of COPE

  • Therefore, for all subsequent patients the catheter was modified to include a Cope loop to prevent migration of the catheter out of the gallbladder [17].
  • The method entails using a Cope-type dilator introducer, which directs the guide wire from its side hole into the SFA while the tip is secured in the deep femoral artery [18].
  • Cournand, Richards, and others finished unlocking the right heart in the 1940s; Zimmerman, Cope, Ross, and others unlocked the left heart in the 1950s; and the coronary arteries were inadvertently unlocked by Sones in 1958, leading to the advent of percutaneous femoral coronary angiography by Judkins and by Amplatz in 1967 [19].
  • Herein, a modification of the Cope suture technique is described by which a Waltman loop is formed with use of a 4-0 Tevdek suture that allows the catheter to be folded back on itself, drawing it into the ipsilateral iliac artery [20].
  • During the study period, thicker needles, Cope anchors, and intravenous glucagon were introduced to improve access, dilate, and immobilize the jejunum [21].
 

Associations of COPE with chemical compounds

  • Single-reference coupled-cluster calculations employing the completely renormalized CCSD(T) (CR-CCSD(T)) approach have been used to examine the mechanism of the Cope rearrangement of 1,5-hexadiene [22].
  • The effects of fluorine substitution on the Cope rearrangements of 1,5-hexadiene and 2,2'-bis-methylenecyclopentane have been examined computationally using (U)B3LYP/6-31+G(d,p) and CASPT2/6-31G(d) methodology [23].
  • In methanol these compounds are converted quantitatively to isomeric 6-hydroxytricyclo[3.3.1.0(2,7)]non-3-en-1,3-dimethyl esters via a two-step sequence involving an initial Cope rearrangement, followed by intramolecular Diels-Alder reaction of the dimethyl carbachorismate or 4-epi-carbachorismate intermediates [15].
  • The minimum energy reaction paths and secondary kinetic isotope effects (KIE) for the Cope rearrangements of cis-1,2-divinylcyclobutane and cis-1,2-divinylcyclopropane obtained by (U)B3LYP calculations are reported [24].
  • The bicyclo[3.2.1]octane skeleton was prepared by Cope rearrangement of a divinylcyclopropane derivative [25].
 

Analytical, diagnostic and therapeutic context of COPE

  • Aromatic 4-tetrahydropyranyl and 4-quinuclidinyl cations. Linking Prins with Cope and Grob [26].
  • Percutaneous enterostomy with the Cope suture anchor [27].
  • STUDY OBJECTIVE: To compare the diagnostic sensitivity of a modified Abrams needle pleural biopsy technique (A1) with the standard Abrams (A2) and Cope needle biopsy methods [28].
  • Long term effects of early nutritional support with new enterotropic peptide-based formula vs. standard enteral formula in HIV-infected patients: randomised prospective trial Chlebowski R T, Beall G, Grovenor M, Lillington L, Weintraub N, Ambler C, Richards E W, Abbruzzese B C, McCamish M A and Cope F O Nutrition 1993; 9 (6): 507-512 [29].
  • Spatially resolved spectroscopy (SRS) is a new near infrared spectroscopy (NIRS) method that, using the multi-distance approach, measures local cerebral cortex hemoglobin oxygen saturation [J. Matcher, P. Kirkpatrick, K. Nahid, M. Cope, and D. T. Delpy, Proc. SPIE 2389, 486-495 (1995)] [30].

References

  1. Flavivirus Infection Activates the XBP1 Pathway of the Unfolded Protein Response To Cope with Endoplasmic Reticulum Stress. Yu, C.Y., Hsu, Y.W., Liao, C.L., Lin, Y.L. J. Virol. (2006) [Pubmed]
  2. Mutations in the lspA1 and lspA2 genes of Haemophilus ducreyi affect the virulence of this pathogen in an animal model system. Ward, C.K., Latimer, J.L., Nika, J., Vakevainen, M., Mock, J.R., Deng, K., Blick, R.J., Hansen, E.J. Infect. Immun. (2003) [Pubmed]
  3. Percutaneous nephrolithotomy for caliceal diverticular calculi: a novel single stage approach. Kim, S.C., Kuo, R.L., Tinmouth, W.W., Watkins, S., Lingeman, J.E. J. Urol. (2005) [Pubmed]
  4. Expression of the Moraxella catarrhalis UspA1 protein undergoes phase variation and is regulated at the transcriptional level. Lafontaine, E.R., Wagner, N.J., Hansen, E.J. J. Bacteriol. (2001) [Pubmed]
  5. Amyloidosis and pleural disease. Kavuru, M.S., Adamo, J.P., Ahmad, M., Mehta, A.C., Gephardt, G.N. Chest (1990) [Pubmed]
  6. Children's coping with pain during dental care. Versloot, J., Veerkamp, J.S., Hoogstraten, J., Martens, L.C. Community dentistry and oral epidemiology. (2004) [Pubmed]
  7. Message for caregivers of dementia with Lewy bodies patients: hallucinations can be pleasurable for your patient. Cope with your embarrassment and empathize. Pucci, E. Eur. J. Neurol. (2006) [Pubmed]
  8. What happens to special hospital patients admitted to medium security? Quinn, P., Ward, M. Medicine, science, and the law. (2000) [Pubmed]
  9. Emerging infectious disease and the loss of biodiversity in a Neotropical amphibian community. Lips, K.R., Brem, F., Brenes, R., Reeve, J.D., Alford, R.A., Voyles, J., Carey, C., Livo, L., Pessier, A.P., Collins, J.P. Proc. Natl. Acad. Sci. U.S.A. (2006) [Pubmed]
  10. Theoretical investigation of the stereoselective stepwise cope rearrangement of a 3-vinylmethylenecyclobutane. Zhao, Y.L., Suhrada, C.P., Jung, M.E., Houk, K.N. J. Am. Chem. Soc. (2006) [Pubmed]
  11. Combined C-H activation/cope rearrangement as a strategic reaction in organic synthesis: total synthesis of (-)-colombiasin a and (-)-elisapterosin B. Davies, H.M., Dai, X., Long, M.S. J. Am. Chem. Soc. (2006) [Pubmed]
  12. Cope Elimination: Elucidation of Solvent Effects from QM/MM Simulations. Acevedo, O., Jorgensen, W.L. J. Am. Chem. Soc. (2006) [Pubmed]
  13. Percutaneous transcatheter treatment of an intracavitary aspergilloma. Klein, J.S., Fang, K., Chang, M.C. Cardiovascular and interventional radiology. (1993) [Pubmed]
  14. Exploration of the enantioselective birch-cope sequence for the synthesis of carbocyclic quaternary stereocenters. Paul, T., Malachowski, W.P., Lee, J. J. Org. Chem. (2007) [Pubmed]
  15. Investigation of the enzymatic and nonenzymatic cope rearrangement of carbaprephenate to carbachorismate. Aemissegger, A., Jaun, B., Hilvert, D. J. Org. Chem. (2002) [Pubmed]
  16. Total synthesis of hexuronic acids. Mieczkowski, J., Zamojski, A. Carbohydr. Res. (1977) [Pubmed]
  17. A new catheter design for percutaneous cholecystostomy. McGahan, J.P. Radiology. (1988) [Pubmed]
  18. Antegrade catheterization of the superficial femoral artery. Saddekni, S., Srur, M., Cohn, D.J., Rozenblit, G., Wetter, E.B., Sos, T.A. Radiology. (1985) [Pubmed]
  19. The history of interventional cardiology: cardiac catheterization, angioplasty, and related interventions. Mueller, R.L., Sanborn, T.A. Am. Heart J. (1995) [Pubmed]
  20. A new twist on the Waltman loop for uterine fibroid embolization. Shlansky-Goldberg, R., Cope, C. Journal of vascular and interventional radiology : JVIR. (2001) [Pubmed]
  21. US and fluoroscopic-guided percutaneous jejunostomy: experience in 49 patients. van Overhagen, H., Ludviksson, M.A., Laméris, J.S., Zwamborn, A.W., Tilanus, H.W., Dees, J., Hansen, B.E. Journal of vascular and interventional radiology : JVIR. (2000) [Pubmed]
  22. Balancing dynamic and nondynamic correlation for diradical and aromatic transition states: a renormalized coupled-cluster study of the cope rearrangement of 1,5-hexadiene. McGuire, M.J., Piecuch, P. J. Am. Chem. Soc. (2005) [Pubmed]
  23. Dissociative and associative mechanisms of cope rearrangements of fluorinated 1,5-hexadienes and 2,2'-bis-methylenecyclopentanes. Black, K.A., Wilsey, S., Houk, K.N. J. Am. Chem. Soc. (2003) [Pubmed]
  24. Transition structures, energetics, and secondary kinetic isotope effects for cope rearrangements of cis-1,2-divinylcyclobutane and cis-1,2-divinylcyclopropane: a DFT study. Ozkan, I., Zora, M. J. Org. Chem. (2003) [Pubmed]
  25. Total synthesis of (+/-)-clavubicyclone. Ito, H., Takeguchi, S., Kawagishi, T., Iguchi, K. Org. Lett. (2006) [Pubmed]
  26. Aromatic 4-tetrahydropyranyl and 4-quinuclidinyl cations. Linking Prins with Cope and Grob. Alder, R.W., Harvey, J.N., Oakley, M.T. J. Am. Chem. Soc. (2002) [Pubmed]
  27. Percutaneous enterostomy with the Cope suture anchor. Coleman, C.C., Coons, H.G., Cope, C., Derauf, B.J., Krenzel, C., Epstein, D.H., Schlam, B.W., Castaneda, F., Hough, J.P., Moradian, G.P. Radiology. (1990) [Pubmed]
  28. A modified Abrams needle biopsy technique. Kirsch, C.M., Kroe, D.M., Jensen, W.A., Kagawa, F.T., Wehner, J.H., Campagna, A.C. Chest (1995) [Pubmed]
  29. Long term effects of early nutritional support with new enterotropic peptide-based formula vs. standard enteral formula in HIV-infected patients: randomised prospective trial Chlebowski R T, Beall G, Grovenor M, Lillington L, Weintraub N, Ambler C, Richards E W, Abbruzzese B C, McCamish M A and Cope F O Nutrition 1993; 9 (6): 507-512. Baldwin, C., Noble, C. Clinical nutrition (Edinburgh, Scotland) (1994) [Pubmed]
  30. Noninvasive measurement of cerebral hemoglobin oxygen saturation using two near infrared spectroscopy approaches. Quaresima, V., Sacco, S., Totaro, R., Ferrari, M. Journal of biomedical optics. (2000) [Pubmed]
 
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