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Hoffmann, R. A wiki for the life sciences where authorship matters. Nature Genetics (2008)
 
Gene Review

IGKV2D-30  -  immunoglobulin kappa variable 2D-30

Homo sapiens

Synonyms: A1, IGKV2D30
 
 
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Disease relevance of IGKV2D-30

 

High impact information on IGKV2D-30

  • Entry of cholera toxin into polarized human intestinal epithelial cells. Identification of an early brefeldin A sensitive event required for A1-peptide generation [6].
  • Polymorphism in a DNA sequence has been observed on the 3'-flanking region of the human apoprotein-A-1 gene [7].
  • Elements of the maize A1 promoter required for transactivation by the anthocyanin B/C1 or phlobaphene P regulatory genes [8].
  • In maize flavonoid biosynthesis, the A1 gene is independently regulated in the anthocyanin and phlobaphene pathways [8].
  • Molecular polymorphism and epidemiology of Neisseria meningitidis immunoglobulin A1 proteases [9].
 

Chemical compound and disease context of IGKV2D-30

 

Biological context of IGKV2D-30

  • The N and A1 domains show 45% and 51% amino acid sequence identity with the corresponding domains of the three CEA family members whose sequences have been determined [12].
  • Two black blood samples with phenotype A2B contained A1-enzyme, but not A2-enzyme, and exhibited several times higher B-enzyme activity than control AB and B blood [13].
  • Binding sites for high molecular weight kininogen (HK) and for factor XIIa are present in the Apple 1 (A1) and the A4 domains of factor XI, respectively [14].
  • These results suggest that perturbations in RNA splicing mechanisms may contribute to malignant transformation and provide direct evidence that the A1 protein is not required for cell growth [15].
  • Platelet adhesion to damaged vessel wall and shear-induced platelet aggregation necessitate binding of the von Willebrand factor (VWF) A1 domain to platelet GPIbalpha [16].
 

Anatomical context of IGKV2D-30

  • In these two cases, therefore, the A2 character was not caused by the subactive A2-enzyme, but because of an insufficient formation of the A-substances in red cell membranes presumably caused by the competition between the A1-enzyme and the super active atypical B-enzyme at the common H-sites [13].
  • In one erythroleukemia cell line, A1 expression was undetectable as a result of F-MuLV integration in one allele and loss of the other allele [15].
  • We indeed observed a lower level of hnRNP A1 in in vitro HTLV-1-transformed virus-producing T cells than that detected in Jurkat cells [17].
  • Furthermore, A1 proteins from Jurkat cells were acting in a concentration-dependent manner, suggesting that the amount of these RNA-binding proteins is a critical parameter in controlling Rex activity [17].
  • Monocyte-derived dendritic cells infected with a recombinant canarypoxvirus (ALVAC) containing the entire MAGE-A1 gene were used to stimulate CD8+ T lymphocytes from the blood of individuals without cancer [18].
 

Associations of IGKV2D-30 with chemical compounds

  • The His563Arg, Ile566Leu, and Asp570Ala mutations also impaired the binding of heparin, which competes with AJvW-2 for binding to A1 [16].
  • The number of ADP-ribose moieties incorporated into ech A1 peptide was dependent on incubation conditions and time as well as toxin concentration [19].
  • The formation of mono- and multi-(ADP-ribosylated) A1 peptides was prevented by the addition of arginine, an alternative ADP-ribose acceptor [19].
  • The mono- and multi-(ADP-ribosylated) A1 peptides catalyzed the NAD-dependent ADP-ribosylation of arginine methyl ester [19].
  • Triton X-100 polyacrylamide gel electrophoresis separated the A1 peptide of choleragen from the B complex and multi-(ADP-ribosylated) A1 peptides from unmodified A1 [19].
 

Analytical, diagnostic and therapeutic context of IGKV2D-30

  • OBJECTIVE: To determine whether levels of HDL are associated with viral load response in HIV-treated patients, and to seek an explanation based on amino acid sequence similarity between the key apolipoprotein A1 and HIV proteins concerned in viral replication [20].
  • In addition, nested RT-PCR analysis revealed the mRNA expression of Eph A1, one of the representative receptors for ephrin A1, in human blastocysts obtained from patients undergoing in vitro fertilization treatment [21].
  • Purification, properties and extended solution structure of the complex formed between human immunoglobulin A1 and human serum albumin by scattering and ultracentrifugation [22].
  • METHODS: Oligonucleotide primers based on the cytochrome P450 L1 A1 demethylase gene were used to successfully amplify by PCR a single 1.0-kb and a single 500-bp DNA fragment from C. albicans, C. tropicalis, C. krusei, C. glabrata, C. parapsilosis, and C. pelliculosa genomic DNA [23].
  • Sequence analysis of selected clones revealed that one of the cDNAs encoded porcine apolipoprotein (apo) A-1 [24].

References

  1. Neisseria gonorrhoeae and neisseria meningitidis: extracellular enzyme cleaves human immunoglobulin A. Plaut, A.G., Gilbert, J.V., Artenstein, M.S., Capra, J.D. Science (1975) [Pubmed]
  2. ATP-binding cassette A1 protein and HDL homeostasis. Owen, J.S., Mulcahy, J.V. Atherosclerosis. Supplements. (2002) [Pubmed]
  3. Selective deposition of immunoglobulin A1 in immunoglobulin A nephropathy, anaphylactoid purpura nephritis, and systemic lupus erythematosus. Conley, M.E., Cooper, M.D., Michael, A.F. J. Clin. Invest. (1980) [Pubmed]
  4. J-chain expression is more prominent in immunoglobulin A2 than in immunoglobulin A1 colonic immunocytes and is decreased in both subclasses associated with inflammatory bowel disease. Kett, K., Brandtzaeg, P., Fausa, O. Gastroenterology (1988) [Pubmed]
  5. Transfer of IgA deficiency to a bone-marrow-grafted patient with aplastic anaemia. Hammarström, L., Lönnqvist, B., Ringdén, O., Smith, C.I., Wiebe, T. Lancet (1985) [Pubmed]
  6. Entry of cholera toxin into polarized human intestinal epithelial cells. Identification of an early brefeldin A sensitive event required for A1-peptide generation. Lencer, W.I., de Almeida, J.B., Moe, S., Stow, J.L., Ausiello, D.A., Madara, J.L. J. Clin. Invest. (1993) [Pubmed]
  7. DNA polymorphism adjacent to human apoprotein A-1 gene: relation to hypertriglyceridaemia. Rees, A., Shoulders, C.C., Stocks, J., Galton, D.J., Baralle, F.E. Lancet (1983) [Pubmed]
  8. Elements of the maize A1 promoter required for transactivation by the anthocyanin B/C1 or phlobaphene P regulatory genes. Tuerck, J.A., Fromm, M.E. Plant Cell (1994) [Pubmed]
  9. Molecular polymorphism and epidemiology of Neisseria meningitidis immunoglobulin A1 proteases. Lomholt, H., Poulsen, K., Caugant, D.A., Kilian, M. Proc. Natl. Acad. Sci. U.S.A. (1992) [Pubmed]
  10. Altered patterns of expression of members of the heterogeneous nuclear ribonucleoprotein (hnRNP) family in lung cancer. Pino, I., Pío, R., Toledo, G., Zabalegui, N., Vicent, S., Rey, N., Lozano, M.D., Torre, W., García-Foncillas, J., Montuenga, L.M. Lung Cancer (2003) [Pubmed]
  11. The immunoglobulin A1 proteinase from Streptococcus pneumoniae is inhibited by tetracycline compounds. Walker, S.G., Carnu, O.I., T??ter, G., Ryan, M.E. FEMS Immunol. Med. Microbiol. (2006) [Pubmed]
  12. Molecular cloning and expression of cDNA for a carcinoembryonic antigen-related fetal liver glycoprotein. Khan, W.N., Osterman, A., Hammarström, S. Proc. Natl. Acad. Sci. U.S.A. (1989) [Pubmed]
  13. The existence of atypical blood group galactosyltransferase which causes an expression of A2 character in A1B red blood cells. Yoshida, A. Am. J. Hum. Genet. (1983) [Pubmed]
  14. The Apple 1 and Apple 4 domains of factor XI act synergistically to promote the surface-mediated activation of factor XI by factor XIIa. Baglia, F.A., Seaman, F.S., Walsh, P.N. Blood (1995) [Pubmed]
  15. Retroviral insertions downstream of the heterogeneous nuclear ribonucleoprotein A1 gene in erythroleukemia cells: evidence that A1 is not essential for cell growth. Ben-David, Y., Bani, M.R., Chabot, B., De Koven, A., Bernstein, A. Mol. Cell. Biol. (1992) [Pubmed]
  16. Shielding the front-strand beta 3 of the von Willebrand factor A1 domain inhibits its binding to platelet glycoprotein Ibalpha. Bonnefoy, A., Yamamoto, H., Thys, C., Kito, M., Vermylen, J., Hoylaerts, M.F. Blood (2003) [Pubmed]
  17. Heterogeneous nuclear ribonucleoprotein A1 interferes with the binding of the human T cell leukemia virus type 1 rex regulatory protein to its response element. Dodon, M.D., Hamaia, S., Martin, J., Gazzolo, L. J. Biol. Chem. (2002) [Pubmed]
  18. Identification of five MAGE-A1 epitopes recognized by cytolytic T lymphocytes obtained by in vitro stimulation with dendritic cells transduced with MAGE-A1. Chaux, P., Luiten, R., Demotte, N., Vantomme, V., Stroobant, V., Traversari, C., Russo, V., Schultz, E., Cornelis, G.R., Boon, T., van der Bruggen, P. J. Immunol. (1999) [Pubmed]
  19. ADP-ribosyltransferase activity of mono- and multi-(ADP-ribosylated) choleragen. Moss, J., Stanley, S.J., Watkins, P.A., Vaughan, M. J. Biol. Chem. (1980) [Pubmed]
  20. High-density lipoprotein concentrations relate to the clinical course of HIV viral load in patients undergoing antiretroviral therapy. Alonso-Villaverde, C., Segues, T., Coll-Crespo, B., Pérez-Bernalte, R., Rabassa, A., Gomila, M., Parra, S., Gozález-Esteban, M.A., Jiménez-Expósito, M.J., Masana, L. AIDS (2003) [Pubmed]
  21. Human endometrial epithelial cells express ephrin A1: possible interaction between human blastocysts and endometrium via Eph-ephrin system. Fujiwara, H., Yoshioka, S., Tatsumi, K., Kosaka, K., Satoh, Y., Nishioka, Y., Egawa, M., Higuchi, T., Fujii, S. J. Clin. Endocrinol. Metab. (2002) [Pubmed]
  22. Purification, properties and extended solution structure of the complex formed between human immunoglobulin A1 and human serum albumin by scattering and ultracentrifugation. Almogren, A., Furtado, P.B., Sun, Z., Perkins, S.J., Kerr, M.A. J. Mol. Biol. (2006) [Pubmed]
  23. Polymerase chain reaction and restriction fragment length polymorphism mediated detection and speciation of Candida spp causing intraocular infection. Okhravi, N., Adamson, P., Mant, R., Matheson, M.M., Midgley, G., Towler, H.M., Lightman, S. Invest. Ophthalmol. Vis. Sci. (1998) [Pubmed]
  24. Synthesis of apolipoprotein A-1 in pig brain microvascular endothelial cells. Weiler-Güttler, H., Sommerfeldt, M., Papandrikopoulou, A., Mischek, U., Bonitz, D., Frey, A., Grupe, M., Scheerer, J., Gassen, H.G. J. Neurochem. (1990) [Pubmed]
 
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