The world's first wiki where authorship really matters (Nature Genetics, 2008). Due credit and reputation for authors. Imagine a global collaborative knowledge base for original thoughts. Search thousands of articles and collaborate with scientists around the globe.

wikigene or wiki gene protein drug chemical gene disease author authorship tracking collaborative publishing evolutionary knowledge reputation system wiki2.0 global collaboration genes proteins drugs chemicals diseases compound
Hoffmann, R. A wiki for the life sciences where authorship matters. Nature Genetics (2008)
 
Chemical Compound Review

dodecane     dodecane

Synonyms:
 
 
Welcome! If you are familiar with the subject of this article, you can contribute to this open access knowledge base by deleting incorrect information, restructuring or completely rewriting any text. Read more.
 

Disease relevance of dodecane

  • Pseudomonas oleovorans can grow on linear alkanes and alkenes in the hexane to dodecane range by virtue of enzymes encoded by the alk genes [1].
  • Dodecane, unlike mezerein, did not induce the formation of a significant number of pyknotic cells, however, suggesting that the weak promoting activity of dodecane in stage 1 was not a result of toxicity [2].
  • Identification and characterization of xcpR encoding a subunit of the general secretory pathway necessary for dodecane degradation in Acinetobacter calcoaceticus ADP1 [3].
  • The solvent, dodecane/2-ethylhexyl acetate (4:6), exhibited excellent efficiency in the preparation of methyl ursodeoxycholate with Eubacterium aerofaciens JCM 7790 [4].
 

High impact information on dodecane

  • To understand how these apolipoproteins behave at an hydrophobic lipoprotein interface, the interfacial properties of a consensus sequence peptide (CSP) derived from three exchangeable apolipoproteins (A-I, A-IV, and E) were studied using an oil drop tensiometer at air/water (A/W) and dodecane/water (DD/W) interfaces [5].
  • We also present an analysis of the orientational ordering of water molecules at the dodecane-water interface and around butane- and dodecanethiol passivated nanoparticles [6].
  • Simulations were performed using butane-, dodecane-, and octadecanethiol passivated nanoparticles [6].
  • Effects of ceramide-1-phosphate on cultured cells: dependence on dodecane in the vehicle [7].
  • To understand the importance of AbetaS in recruiting TAG, the interfacial properties of two AbetaS consensus peptides, P12 and P27, were studied at dodecane/water (DD/W) and triolein/water (TO/W) interfaces [8].
 

Chemical compound and disease context of dodecane

  • Mutants of Acinetobacter calcoaceticus ADP1 unable to grow on dodecane, but retaining the ability to grow on lauric acid were isolated after ethylmethanesulphonate (EMS) treatment [9].
 

Biological context of dodecane

  • The turnover number of (omega-1)-hydroxylation of lauric and oleic acids decreased from 7.8 to 1.5 min(-1), respectively, suggesting that the dodecane alkyl chain allows optimal binding to the active site of CYP2E1 [10].
  • Percutaneous absorption and skin irritation upon low-level prolonged dermal exposure to nonane, dodecane and tetradecane in hairless rats [11].
  • In the present investigation we have used NMR-diffusometry and electrical conductivity to follow the interactions which take place between beta-cyclodextrin and a bolaform surfactant: dodecane 1,12-bis(trimethylammonium bromide) [12].
  • The incorporation of dodecane side chains on highly charged polycations severely amplified the cytotoxicity so that, in return, the transfection level was dramatically affected [13].
  • In addition, C2-ceramides and natural ceramides dispersed in a solvent mixture of ethanol and dodecane induced characteristic features of apoptosis in MIN6 cells, mimicking TNF-induced DNA damage [14].
 

Anatomical context of dodecane

  • We have used a lamellar phase made of a nonionic surfactant, dodecane and water, as a model membrane to investigate its interactions with macromolecular inclusions bringing together two membranes, i.e., acting as macromolecular snaps [15].
  • It can be concluded that dodecane uptake by the cells is responsible for the morphological changes in the cells and leads to more activity in the cell membrane [16].
  • Synthesis of N,N'-bis-substituted diimides related to tricyclo [6.2.2.0(1,6)] dodecane with an expected activity on the central nervous system [17].
 

Associations of dodecane with other chemical compounds

 

Gene context of dodecane

  • P12 and P27 are almost purely elastic on DD/W, TO/W, and air/water interfaces [8].
  • The most likely explanation to this result is that the diameter of the lipid-water cylinders in the HII phase grows gradually larger with increased acyl chain saturation and more water and dodecane are consequently needed to fill the water cylinders and the void volumes between the cylinders, respectively [21].
  • Counterion binding parameter (beta) was also determined from zeta-potential of dodecane droplets under the same conditions and it was found that (beta) was independent of the type of the head group and the mole fraction of ionic surfactant at interface [22].
  • Particles capped with dodecane thiol had a mean diameter of 6.6+/-1 nm, while trioctyl phosphine capped particles were 6.0+/-2 nm determined via TEM microscopy [23].
  • Dodecane produced only mild irritation in response to experimental conditions of the present study and further did not show significant differences in IL-1alpha and MCP-1 levels in skin and blood [24].
 

Analytical, diagnostic and therapeutic context of dodecane

  • We captured amorphadiene as it was produced in situ by employing a two-phase partitioning bioreactor with a dodecane organic phase [25].
  • Electron microscopy photographs showed an undulated shape of the cell membrane and a space between the cell and the chloroplast membranes in the cells growing in the presence of dodecane (a biocompatible solvent) [16].
  • NMR diffusometry and conductometry study of the host-guest association between beta-cyclodextrin and dodecane 1,12-bis(trimethylammonium bromide) [12].
  • We report on the rheology of a lyotropic lamellar surfactant solution (SDS/dodecane/pentanol/ water), and identify a discontinuous transition between two shear thinning regimes which correspond to the low-stress lamellar phase and the more viscous shear-induced multilamellar vesicle, or "onion" phase [26].
  • Linear alkanes of specific chain length between 6 and 16 carbon atoms, an aryl derivative of dodecane, and a phorbol diester were tested in a cell culture system for relative ability to enhance mutagenesis induced by a chemical carcinogen, methylazoxymethanol acetate (MAM) [27].

References

  1. Bioconversions of aliphatic compounds by Pseudomonas oleovorans in multiphase bioreactors: background and economic potential. Witholt, B., de Smet, M.J., Kingma, J., van Beilen, J.B., Kok, M., Lageveen, R.G., Eggink, G. Trends Biotechnol. (1990) [Pubmed]
  2. Mechanism of mouse skin tumor promotion by n-dodecane. Baxter, C.S., Miller, M.L. Carcinogenesis (1987) [Pubmed]
  3. Identification and characterization of xcpR encoding a subunit of the general secretory pathway necessary for dodecane degradation in Acinetobacter calcoaceticus ADP1. Parche, S., Geissdörfer, W., Hillen, W. J. Bacteriol. (1997) [Pubmed]
  4. Preparation of methyl ursodeoxycholate in an interface bioreactor: use of a mixed solvent system to increase the solubilities of substrate and product. Oda, S., Sugai, T., Ohta, H. J. Biosci. Bioeng. (2001) [Pubmed]
  5. Interfacial properties of an amphipathic alpha-helix consensus peptide of exchangeable apolipoproteins at air/water and oil/water interfaces. Wang, L., Atkinson, D., Small, D.M. J. Biol. Chem. (2003) [Pubmed]
  6. Wetting properties of passivated metal nanocrystals at liquid-vapor interfaces: a computer simulation study. Tay, K.A., Bresme, F. J. Am. Chem. Soc. (2006) [Pubmed]
  7. Effects of ceramide-1-phosphate on cultured cells: dependence on dodecane in the vehicle. Tauzin, L., Graf, C., Sun, M., Rovina, P., Bouveyron, N., Jaritz, M., Winiski, A., Hartmann, N., Staedtler, F., Billich, A., Baumruker, T., Zhang, M., Bornancin, F. J. Lipid Res. (2007) [Pubmed]
  8. Interfacial properties of amphipathic beta strand consensus peptides of apolipoprotein B at oil/water interfaces. Wang, L., Small, D.M. J. Lipid Res. (2004) [Pubmed]
  9. Two genes encoding proteins with similarities to rubredoxin and rubredoxin reductase are required for conversion of dodecane to lauric acid in Acinetobacter calcoaceticus ADP1. Geissdörfer, W., Frosch, S.C., Haspel, G., Ehrt, S., Hillen, W. Microbiology (Reading, Engl.) (1995) [Pubmed]
  10. Involvement of cytochrome P450 2E1 in the (omega-1)-hydroxylation of oleic acid in human and rat liver microsomes. Adas, F., Berthou, F., Picart, D., Lozac'h, P., Beaugé, F., Amet, Y. J. Lipid Res. (1998) [Pubmed]
  11. Percutaneous absorption and skin irritation upon low-level prolonged dermal exposure to nonane, dodecane and tetradecane in hairless rats. Babu, R.J., Chatterjee, A., Ahaghotu, E., Singh, M. Toxicology and industrial health. (2004) [Pubmed]
  12. NMR diffusometry and conductometry study of the host-guest association between beta-cyclodextrin and dodecane 1,12-bis(trimethylammonium bromide). Cabaleiro-Lago, C., Nilsson, M., Valente, A.J., Bonini, M., Söderman, O. Journal of colloid and interface science. (2006) [Pubmed]
  13. Synthesis and characterization of new permanently charged poly(amidoammonium) salts and evaluation of their DNA complexes for gene transport. Vuillaume, P.Y., Brunelle, M., Van Calsteren, M.R., Laurent-Lewandowski, S., Bégin, A., Lewandowski, R., Talbot, B.G., Elazhary, Y. Biomacromolecules (2005) [Pubmed]
  14. Tumor necrosis factor alpha signaling pathway and apoptosis in pancreatic beta cells. Ishizuka, N., Yagui, K., Tokuyama, Y., Yamada, K., Suzuki, Y., Miyazaki, J., Hashimoto, N., Makino, H., Saito, Y., Kanatsuka, A. Metab. Clin. Exp. (1999) [Pubmed]
  15. Unbinding-binding transition induced by molecular snaps in model membranes. Taulier, N., Nicot, C., Waks, M., Hodges, R.S., Ober, R., Urbach, W. Biophys. J. (2000) [Pubmed]
  16. Mechanism of extraction of beta-carotene from microalga Dunaliellea salina in two-phase bioreactors. Hejazi, M.A., Kleinegris, D., Wijffels, R.H. Biotechnol. Bioeng. (2004) [Pubmed]
  17. Synthesis of N,N'-bis-substituted diimides related to tricyclo [6.2.2.0(1,6)] dodecane with an expected activity on the central nervous system. Turło, J., Suski, S., Zawadowski, T. Farmaco (1998) [Pubmed]
  18. Drug absorption in vitro model: filter-immobilized artificial membranes. 2. Studies of the permeability properties of lactones in Piper methysticum Forst. Avdeef, A., Strafford, M., Block, E., Balogh, M.P., Chambliss, W., Khan, I. European journal of pharmaceutical sciences : official journal of the European Federation for Pharmaceutical Sciences. (2001) [Pubmed]
  19. Significant discrepancies between van't Hoff and calorimetric enthalpies. III. Liu, Y., Sturtevant, J.M. Biophys. Chem. (1997) [Pubmed]
  20. Inhibition of firefly luciferase by alkane analogues. Takehara, K., Kamaya, H., Ueda, I. Biochim. Biophys. Acta (2005) [Pubmed]
  21. Reversed hexagonal phase formation in lecithin-alkane-water systems with different acyl chain unsaturation and alkane length. Sjölund, M., Rilfors, L., Lindblom, G. Biochemistry (1989) [Pubmed]
  22. The role of the surfactant head group in the emulsification process: binary (nonionic-ionic) surfactant mixtures. Goloub, T.P., Pugh, R.J. Journal of colloid and interface science. (2005) [Pubmed]
  23. Synthesis of spherical silver nanoparticles by digestive ripening, stabilization with various agents, and their 3-D and 2-D superlattice formation. Smetana, A.B., Klabunde, K.J., Sorensen, C.M. Journal of colloid and interface science. (2005) [Pubmed]
  24. Assessment of skin irritation and molecular responses in rat skin exposed to nonane, dodecane and tetradecane. Babu, R.J., Chatterjee, A., Singh, M. Toxicol. Lett. (2004) [Pubmed]
  25. High-level production of amorpha-4,11-diene in a two-phase partitioning bioreactor of metabolically engineered Escherichia coli. Newman, J.D., Marshall, J., Chang, M., Nowroozi, F., Paradise, E., Pitera, D., Newman, K.L., Keasling, J.D. Biotechnol. Bioeng. (2006) [Pubmed]
  26. Vorticity banding during the lamellar-to-onion transition in a lyotropic surfactant solution in shear flow. Wilkins, G.M., Olmsted, P.D. The European physical journal. E, Soft matter (2006) [Pubmed]
  27. Effect of alkane tumor-promoting agents on chemically induced mutagenesis in cultured V79 Chinese hamster cells. Lankas, G.R., Baxter, C.S., Christian, R.T. Journal of toxicology and environmental health. (1978) [Pubmed]
 
WikiGenes - Universities