The world's first wiki where authorship really matters (Nature Genetics, 2008). Due credit and reputation for authors. Imagine a global collaborative knowledge base for original thoughts. Search thousands of articles and collaborate with scientists around the globe.

wikigene or wiki gene protein drug chemical gene disease author authorship tracking collaborative publishing evolutionary knowledge reputation system wiki2.0 global collaboration genes proteins drugs chemicals diseases compound
Hoffmann, R. A wiki for the life sciences where authorship matters. Nature Genetics (2008)
 

Links

 

Gene Review

Rnase1  -  ribonuclease, RNase A family, 1 (pancreatic)

Rattus norvegicus

Synonyms: RL1, RNase 1 gamma, RNase A, Rib-1, Rib1, ...
 
 
Welcome! If you are familiar with the subject of this article, you can contribute to this open access knowledge base by deleting incorrect information, restructuring or completely rewriting any text. Read more.
 

Disease relevance of Rnase1

  • The three-dimensional structure of rat pancreatic RNase A expressed in Escherichia coli was determined [1].
  • We cloned 537 basepairs (bp) of rat partial peroxisome proliferator-activated receptor gamma2 (PPARgamma2) cDNA and examined the effect of fasting or obesity on the expression of two isoforms of rat PPARgamma, gamma1 and gamma2, in either subcutaneous or mesenteric adipose tissue specimens using an RNase A protection assay [2].
 

High impact information on Rnase1

 

Biological context of Rnase1

  • RL1 has the highest specific activity for the hydrolysis of long-chain acyl-CoA [8].
  • Their binding sites on TAR RNA were assigned by RNase A, uranyl nitrate, and lead acetate footprinting [9].
  • Both catalytic sites are comprised of two histidine side chains acting as a general base-general acid pair and a phosphate-activating residue: an arginine in the case of PI-PLC and a lysine in RNase A [10].
  • The cell line, designed RL1, retains sufficient metabolic enzyme activity to detect chromosome damage induced by a variety of chemical mutagens and carcinogens without the incorporation of an extrinsic metabolising system [11].
  • We observed that addition of a specific RNase A preparation to the detergent-based lysing buffer increased the fluorescence of toxicant-induced apoptotic nuclei to the level of untreated diploid nuclei [12].
 

Anatomical context of Rnase1

  • The amount of RL1 in male rats was decreased by castration but recovered to almost the level in sham-operated rat liver microsomes after treatment of the castrated rats with testosterone [8].
  • When rat liver nuclei are isolated in the presence of the irreversible sulfhydryl-blocking reagent iodoacetamide, digested with DNase I and RNase A, and extracted with 1.6 M NaCl, nuclear envelope (NE) spheres depleted of intranuclear material, as analysed by thin-section electron microscopy, are obtained [13].
  • Treatment of cytosol with RNase A in the absence of molybdate, partially shifted the untransformed receptor towards the 5.2-nm transformed receptor form [14].
  • Results showed that the type II fiber-predominant plantaris muscle exhibited a significant increase in total RNase, RNase A and RNase T1L activities (increases ranged from +59% to +196%; P-values between 0.025 and 0.01) concomitant with large falls in RNA and protein content [15].
  • The DF with high viscosity significantly suppressed RNA digestion by RNase A and decreased uptakes of 14C-labeled adenosine and adenosine 5'-monophosphate (5'-AMP) in rat jejunum [16].
 

Associations of Rnase1 with chemical compounds

  • RL1 has the highest specific activities toward p-nitrophenylacetate and malathion [8].
  • On the other hand, phenobarbital treatment of male and female rats caused a significant increase in the amounts of RH1 and RL2, whereas RL1 was not affected [8].
  • Conversely, in ovariectomized female rats, the amount of RL1 was increased as compared to that in sham-operated rats, and treatment of the ovariectomized rats with estradiol tended to decrease the quantity of RL1 [8].
  • In contrast, RL1 and RH1 were decreased by dexamethasone, but not by the other steroids [17].
  • To test this hypothesis, we measured the total tissue and plasma RNase activities as well as the activities of general (RNase A) and specific or "restriction" RNases (T1L, T2L) in ethanol-treated rats [15].
 

Other interactions of Rnase1

  • Examples are provided where ionizable side chain position (protein G), Asn orientation (lysozyme), His tautomer distribution (RNase A), and phosphate ion binding (RNase A and H) change with pH [18].
  • In the present study the enzymatic profile of these regions has been investigated by the immunofluorescent technique using antibodies against nine pancreatic enzymes (alpha-amylase, lipase, chymotrypsinogen A, trypsinogen, elastase, carboxypeptidase A and B, DNase and RNase A) [19].
 

Analytical, diagnostic and therapeutic context of Rnase1

References

  1. The crystal structure of recombinant rat pancreatic RNase A. Gupta, V., Muyldermans, S., Wyns, L., Salunke, D.M. Proteins (1999) [Pubmed]
  2. Subcutaneous or visceral adipose tissue expression of the PPARgamma gene is not altered in the fatty (fa/fa) Zucker rat. Shimoike, T., Yanase, T., Umeda, F., Ichino, I., Takayanagi, R., Nawata, H. Metab. Clin. Exp. (1998) [Pubmed]
  3. An electron microscope autoradiographic study of the carbohydrate recognition systems in rat liver. I. Distribution of 125I-ligands among the liver cell types. Hubbard, A.L., Wilson, G., Ashwell, G., Stukenbrok, H. J. Cell Biol. (1979) [Pubmed]
  4. Correlation of induction of aryl hydrocarbon hydroxylase in cultured rat hepatocytes with saturable high-affinity binding of 3-methylcholanthrene to a 4S cytoplasmic protein. Heintz, N.H., Tierney, B., Bresnick, E., Schaeffer, W.I. Cancer Res. (1981) [Pubmed]
  5. Isolation and characterization of a novel perchloric acid-soluble protein inhibiting cell-free protein synthesis. Oka, T., Tsuji, H., Noda, C., Sakai, K., Hong, Y.M., Suzuki, I., Muñoz, S., Natori, Y. J. Biol. Chem. (1995) [Pubmed]
  6. Selective binding and uptake of ribonuclease A and glyceraldehyde-3-phosphate dehydrogenase by isolated rat liver lysosomes. Cuervo, A.M., Terlecky, S.R., Dice, J.F., Knecht, E. J. Biol. Chem. (1994) [Pubmed]
  7. Binding of the glucocorticoid receptor to the rat liver nuclear matrix. The role of disulfide bond formation. Kaufmann, S.H., Okret, S., Wikström, A.C., Gustafsson, J.A., Shaper, J.H. J. Biol. Chem. (1986) [Pubmed]
  8. Multiplicity and regulation of hepatic microsomal carboxylesterases in rats. Hosokawa, M., Maki, T., Satoh, T. Mol. Pharmacol. (1987) [Pubmed]
  9. Aminoglycoside-arginine conjugates that bind TAR RNA: synthesis, characterization, and antiviral activity. Litovchick, A., Evdokimov, A.G., Lapidot, A. Biochemistry (2000) [Pubmed]
  10. Mechanism of phosphatidylinositol-specific phospholipase C: origin of unusually high nonbridging thio effects. Kravchuk, A.V., Zhao, L., Kubiak, R.J., Bruzik, K.S., Tsai, M.D. Biochemistry (2001) [Pubmed]
  11. An in vitro chromosome assay using cultured rat-liver cells. Dean, B.J., Hodson-Walker, G. Mutat. Res. (1979) [Pubmed]
  12. Factors affecting flow cytometric detection of apoptotic nuclei by DNA analysis. Elstein, K.H., Thomas, D.J., Zucker, R.M. Cytometry. (1995) [Pubmed]
  13. A subset of non-histone nuclear proteins reversibly stabilized by the sulfhydryl cross-linking reagent tetrathionate. Polypeptides of the internal nuclear matrix. Kaufmann, S.H., Shaper, J.H. Exp. Cell Res. (1984) [Pubmed]
  14. RNA binding to the untransformed glucocorticoid receptor. Sensitivity to substrate-specific ribonucleases and characterization of a ribonucleic acid associated with the purified receptor. Sablonnière, B., Economidis, I.V., Lefebvre, P., Place, M., Richard, C., Formstecher, P., Rousseau, G.G., Dautrevaux, M. Eur. J. Biochem. (1988) [Pubmed]
  15. Skeletal muscle ribonuclease activities in chronically ethanol-treated rats. Reilly, M.E., Erylmaz, E.I., Amir, A., Peters, T.J., Preedy, V.R. Alcohol. Clin. Exp. Res. (1998) [Pubmed]
  16. Suppressive effect of viscous dietary fiber on elevations of uric acid in serum and urine induced by dietary RNA in rats is associated with strength of viscosity. Koguchi, T., Nakajima, H., Koguchi, H., Wada, M., Yamamoto, Y., Innami, S., Maekawa, A., Tadokoro, T. International journal for vitamin and nutrition research. Internationale Zeitschrift für Vitamin- und Ernährungsforschung. Journal international de vitaminologie et de nutrition. (2003) [Pubmed]
  17. Differential responses of rat hepatic microsomal carboxylesterase isozymes to glucocorticoids and pregnenolone 16 alpha-carbonitrile. Hosokawa, M., Hattori, K., Satoh, T. Biochem. Pharmacol. (1993) [Pubmed]
  18. Combining conformational flexibility and continuum electrostatics for calculating pK(a)s in proteins. Georgescu, R.E., Alexov, E.G., Gunner, M.R. Biophys. J. (2002) [Pubmed]
  19. Immunohistochemical localization of exocrine enzymes in normal rat pancreas. Bendayan, M., Ito, S. J. Histochem. Cytochem. (1979) [Pubmed]
  20. Properties of an intermediate-sized androgen receptor: association with RNA. Rowley, D.R., Premont, R.T., Johnson, M.P., Young, C.Y., Tindall, D.J. Biochemistry (1986) [Pubmed]
  21. A proline-rich domain in the gamma subunit of phosphodiesterase 6 mediates interaction with SH3-containing proteins. Morin, F., Vannier, B., Houdart, F., Regnacq, M., Berges, T., Voisin, P. Mol. Vis. (2003) [Pubmed]
  22. Evaluation of pancreatic amylase mRNA upon cholinergic stimulation of secretion. Gingras, D., Bendayan, M. J. Histochem. Cytochem. (2005) [Pubmed]
 
WikiGenes - Universities