The world's first wiki where authorship really matters (Nature Genetics, 2008). Due credit and reputation for authors. Imagine a global collaborative knowledge base for original thoughts. Search thousands of articles and collaborate with scientists around the globe.

wikigene or wiki gene protein drug chemical gene disease author authorship tracking collaborative publishing evolutionary knowledge reputation system wiki2.0 global collaboration genes proteins drugs chemicals diseases compound
Hoffmann, R. A wiki for the life sciences where authorship matters. Nature Genetics (2008)
 
Gene Review

thiL  -  thiamine monophosphate kinase

Escherichia coli str. K-12 substr. MG1655

Synonyms: ECK0411, JW0407
 
 
Welcome! If you are familiar with the subject of this article, you can contribute to this open access knowledge base by deleting incorrect information, restructuring or completely rewriting any text. Read more.
 

Disease relevance of thiL

  • RNase P preparations from Escherichia coli can be separated into RNA and protein by chromatography, in buffers containing 7 M urea, on Sephadex G-200, DEAE-Sephadex, or CM-Sephadex columns [1].
  • This NAD glycohydrolase activity co-chromatographed on Sephacryl G-200 in 6.5 M urea, pH 3.2, 0.1 M glycine with the ADP-ribosyltransferase activity of the toxin, as monitored by the transfer of [32P]ADP-ribose from [32P]NAD to a 41,000-Da protein in NG108-15 neuroblastoma X glioma hybrid cells [2].
  • A nucleic acid methylase, N2-guanine ribonucleic acid (RNA) methyltransferase, which is associated with type C RNA tumor viruses, has been purified from avian myeloblastosis virions by gel filtration on Sephadex G-200, followed by chromatography on hydroxylapatite [3].
  • An extracellular bactericidal substance was isolated from the supernatant of Streptococcus mutans Rm-10 culture fluid and partially purified with 60% ammonium sulfate precipitation, differential centrifugation, and gel filtration on Sephadex G-200 [4].
  • We have succeeded in the heterologous expression and the complete and uniform isotopic 15N-labelling of the cytochrome c553 from Desulfovibrio vulgaris Hildenborough, in a sulphate-reducing bacterium, D. desulfuricans G200, by using a growth medium combining 15N-ammonium chloride and 15N-Celtone [5].
 

High impact information on thiL

 

Biological context of thiL

  • Deletion of 0.4 kb upstream from orf1 abolished the expression of Hmc in D. desulfuricans G200, indicating this region to contain the hmc operon promoter [11].
  • The non-immunoglobulin component of human milk responsible for the inhibition of Escherichia coli cell adhesion (haemagglutination) mediated by colonisation factor antigen 1 (CFA1) was determined by chromatographic fractionation of human whey proteins with Sephadex G-200, DEAE cellulose and heparin-sepharose [12].
  • The complex which is formed when excess regulatory subunits (r2) of aspartate transcarbamoylase (EC2.1.3.2) are added to a dilute solution of the catalytic subunit (c3) has been studied by gel-filtration on Sephadex G-200 [13].
 

Anatomical context of thiL

 

Associations of thiL with chemical compounds

  • T7 gene 6 exonuclease has been shown to have an RNase H activity as well as a double-strand specific DNase activity by the following experiments: The RNase H activity coelutes with the DNase activity from DEAE-cellulose, phosphocellulose, hydroxyapatite, and Sephadex G-200 columns [16].
  • To separate these aggregates, the unheated porin was suspended in 30% SDS, applied to a Sephadex G-200 gel filtration column, and eluted with 0.5% sodium deoxycholate [17].
  • The purification procedure involved phenol extraction, NaCl extraction, gel filtration on Sephadex G-100 and Sephadex G-200, and reversed-phase column chromatography on RPC-5 [18].
  • C*A remains stable following gel chromatography on Sephadex G-200 and sucrose gradient ultracentrifugation [19].
  • By contrast, chromatography of cell extracts with G-75 or G-200 columns revealed a singl-molecular-weight species of shikimate kinase activity with an apparent molecular weight of 20,000 [20].
 

Analytical, diagnostic and therapeutic context of thiL

  • The apparent molecular size of the complex was 140 kDa as determined by gel filtration on a Sephadex G-200 column [21].
  • Because of interference caused by humic acidlike substances, crude DNA extracts were purified with a Sephadex G-200 spun column before the PCR was begun [22].
  • Thermostabilities of kanamycin nucleotidyltransferase and of its mutants that became thermostable, in the free state, because of single-amino-acid replacements were studied after immobilization of the enzymes on cyanogen bromide-activated Sephadex G-200 particles [23].
  • GTP cyclohydrolase I, the first enzyme in the de novo biosynthesis of tetrahydrobiopterin, was enriched more than 13,000-fold from human liver by preparative isoelectric focusing using Sephadex G-200 SF gels [24].
  • The length of trp regRNA determined by filtration on Sephadex G-200 is 110-180 nucleotides [25].

References

  1. Reconstitution of RNase P activity from inactive RNA and protein. Kole, R., Altman, S. Proc. Natl. Acad. Sci. U.S.A. (1979) [Pubmed]
  2. Activation by thiol of the latent NAD glycohydrolase and ADP-ribosyltransferase activities of Bordetella pertussis toxin (islet-activating protein). Moss, J., Stanley, S.J., Burns, D.L., Hsia, J.A., Yost, D.A., Myers, G.A., Hewlett, E.L. J. Biol. Chem. (1983) [Pubmed]
  3. Partial purification and characterization of a ribonucleic acid N2-guanine methyltransferase associated with avian myeloblastosis virus. Taylor, M.J., Gantt, R. Biochemistry (1979) [Pubmed]
  4. Isolation, partial purification and preliminary characterization of a bacteriocin from Streptococcus mutans Rm-10. Fukushima, H., Kelstrup, J., Fukushima, S., Umemoto, T., Sagawa, H. Antonie Van Leeuwenhoek (1983) [Pubmed]
  5. 15N-labelling and preliminary heteronuclear NMR study of Desulfovibrio vulgaris Hildenborough cytochrome c553. Morelli, X., Dolla, A., Toci, R., Guerlesquin, F. Eur. J. Biochem. (1999) [Pubmed]
  6. Expression and characterization of mutant forms of the type I regulatory subunit of cAMP-dependent protein kinase. The effect of defective cAMP binding on holoenzyme activation. Woodford, T.A., Correll, L.A., McKnight, G.S., Corbin, J.D. J. Biol. Chem. (1989) [Pubmed]
  7. Serine and tyrosine protein kinase activities in Streptococcus pyogenes. Phosphorylation of native and synthetic peptides of streptococcal M proteins. Chiang, T.M., Reizer, J., Beachey, E.H. J. Biol. Chem. (1989) [Pubmed]
  8. Purification and properties of cytochrome b556 in the respiratory chain of aerobically grown Escherichia coli K12. Kita, K., Yamato, I., Anraku, Y. J. Biol. Chem. (1978) [Pubmed]
  9. 3-Deoxy-D-arabino-heptulosonate 7-phosphate synthase. Purification, properties, and kinetics of the tyrosine-sensitive isoenzyme from Escherichia coli. Schoner, R., Herrmann, K.M. J. Biol. Chem. (1976) [Pubmed]
  10. Lysophospholipase of Escherichia coli. Doi, O., Nojima, S. J. Biol. Chem. (1975) [Pubmed]
  11. The hmc operon of Desulfovibrio vulgaris subsp. vulgaris Hildenborough encodes a potential transmembrane redox protein complex. Rossi, M., Pollock, W.B., Reij, M.W., Keon, R.G., Fu, R., Voordouw, G. J. Bacteriol. (1993) [Pubmed]
  12. Free secretory component and lactoferrin of human milk inhibit the adhesion of enterotoxigenic Escherichia coli. Giugliano, L.G., Ribeiro, S.T., Vainstein, M.H., Ulhoa, C.J. J. Med. Microbiol. (1995) [Pubmed]
  13. Further studies on aspartate transcarbamoylase: molecular weight of the c3r6 complex and analysis of succinate inhibition in the native enzyme. Chan, W.W. Can. J. Biochem. (1976) [Pubmed]
  14. Bacterial overexpression, purification, and reconstitution of the carnitine/acylcarnitine carrier from rat liver mitochondria. Indiveri, C., Iacobazzi, V., Giangregorio, N., Palmieri, F. Biochem. Biophys. Res. Commun. (1998) [Pubmed]
  15. Purification of horse eosinophil peroxidase. Jörg, A., Pasquier, J.M., Klebanoff, S.J. Biochim. Biophys. Acta (1982) [Pubmed]
  16. T7 gene 6 exonuclease has an RNase H activity. Shinozaki, K., Okazaki, T. Nucleic Acids Res. (1978) [Pubmed]
  17. Isolation and preliminary characterization of wild-type OmpC porin dimers from Escherichia coli K-12. Rocque, W.J., McGroarty, E.J. Biochemistry (1989) [Pubmed]
  18. Purification of the messenger ribonucleic acid for the lipoprotein of the Escherichia coli outer membrane. Wang, S.S., Pirtle, R., Pirtle, I., Small, M., Inouye, M. Biochemistry (1979) [Pubmed]
  19. Interaction between the antibiotic spiramycin and a ribosomal complex active in peptide bond formation. Dinos, G., Synetos, D., Coutsogeorgopoulos, C. Biochemistry (1993) [Pubmed]
  20. Aromatic amino acid biosynthesis: regulation of shikimate kinase in Escherichia coli K-12. Ely, B., Pittard, J. J. Bacteriol. (1979) [Pubmed]
  21. Identification and chemical synthesis of a ribosomal protein antigenic determinant in systemic lupus erythematosus. Elkon, K., Skelly, S., Parnassa, A., Moller, W., Danho, W., Weissbach, H., Brot, N. Proc. Natl. Acad. Sci. U.S.A. (1986) [Pubmed]
  22. Detection of Escherichia coli in sewage and sludge by polymerase chain reaction. Tsai, Y.L., Palmer, C.J., Sangermano, L.R. Appl. Environ. Microbiol. (1993) [Pubmed]
  23. Does single-amino-acid replacement work in favor of or against improvement of the thermostability of immobilized enzyme? Koizumi, J., Zhang, M., Imanaka, T., Aiba, S. Appl. Environ. Microbiol. (1990) [Pubmed]
  24. Purification of GTP cyclohydrolase I from human liver and production of specific monoclonal antibodies. Schoedon, G., Redweik, U., Curtius, H.C. Eur. J. Biochem. (1989) [Pubmed]
  25. Punctuation of transcription in vitro of the tryptophan operon of Escherichia coli. A novel type of control of transcription. Pannekoek, H., Brammar, W.J., Pouwels, P.H. Mol. Gen. Genet. (1975) [Pubmed]
 
WikiGenes - Universities