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Gene Review

cspA  -  RNA chaperone and antiterminator, cold...

Escherichia coli str. K-12 substr. MG1655

Synonyms: ECK3543, JW3525
 
 
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Disease relevance of cspA

  • Acquirement of cold sensitivity by quadruple deletion of the cspA family and its suppression by PNPase S1 domain in Escherichia coli [1].
  • Cloning of two cold shock genes, cspA and cspG, from the deep-sea psychrophilic bacterium Shewanella violacea strain DSS12 [2].
  • Identification and characterization of five cspA homologous genes from Myxococcus xanthus [3].
  • The three-dimensional structure of CspA is similar to that of the major cold shock protein of Bacillus subtilis, CspB, which has recently been determined at 2.45-A resolution [4].
  • Acclimatization of the psychrotolerant Yersinia enterocolitica after a cold shock from 30 degrees C to 10 degrees C causes transcription of the major cold shock protein (CSP) bicistronic gene cspA1/A2 to increase by up to 300-fold [5].
 

High impact information on cspA

  • The cspA mRNA level decreases rapidly with increasing cell density, becoming virtually undetectable by mid-to-late exponential growth phase while the CspA level declines, although always remaining clearly detectable [6].
  • The cspA mRNA instability is due to its 5' untranslated leader and is counteracted in vivo by the cold-shock DeaD box RNA helicase (CsdA) [6].
  • This induction required the varsigma factor, RpoS, but was independent of the major cold-shock protein, CspA. otsA/B mRNA was much more stable at 16 degrees C than at 37 degrees C and contained a "downstream box," characteristic of cold-inducible mRNAs [7].
  • The relaxation kinetics of the major cold shock protein of Escherichia coli (CspA) in response to a laser-induced temperature jump are exponential for small temperature jumps, indicative of folding through a two-state mechanism [8].
  • Our results demonstrate that the AUG initiation codon and the coding region containing the downstream box are not required for cspA mRNA to bind ribosomes and that the 5'-untranslated region by itself has a remarkable affinity to ribosomes at low temperature [9].
 

Chemical compound and disease context of cspA

 

Biological context of cspA

  • Based on these results, we suggest that the role of the CSC-box is related to downregulation of cspA mRNA after acclimation to low temperature [5].
  • Screening for mutations among common laboratory E. coli strains showed a high degree of genetic diversity in cspC but not in cspA and cspE [12].
  • The amount of mRNA from the chromosomal cspA gene was much higher in cells overproducing the wild-type 5' UTR by means of a plasmid than it was in cells overproducing the cold-box-deleted 5' UTR [13].
  • Identification of the promoter region of the Escherichia coli major cold shock gene, cspA [14].
  • The role of the cold-box region was further confirmed with a cspA mutant strain containing a cold-box-deleted cspA gene integrated into the chromosome, which showed a high level of constitutive production of CspA but not CspB during exponential growth at low temperature [13].
 

Anatomical context of cspA

  • We demonstrate that the observed growth inhibition was caused by largely exclusive occupation of cellular ribosomes by the mutant cspA mRNAs [15].
 

Associations of cspA with chemical compounds

 

Other interactions of cspA

  • Surprisingly, E. coli contains a large CspA family, consisting of nine genes from cspA to cspI [19].
  • Characterization of cspB, a cold-shock-inducible gene from Lactococcus lactis, and evidence for a family of genes homologous to the Escherichia coli cspA major cold shock gene [20].
  • The performance of the major Escherichia coli cold-shock promoter in directing the synthesis of recombinant proteins at low temperatures was investigated in batch fermentations using a plasmid-encoded transcriptional gene fusion between the cspA promoter region and the lacZ gene [21].
  • It has been proposed that this effect is due to highly conserved 11-base sequences designated the "cold box" existing in the 5' UTRs of cspA, cspB, and csdA [13].
  • Inactivation of fecR results in significant increases in both cell aggregation and biofilm formation, while the effects of cspA are not as strong in the conditions tested [22].
 

Analytical, diagnostic and therapeutic context of cspA

References

  1. Acquirement of cold sensitivity by quadruple deletion of the cspA family and its suppression by PNPase S1 domain in Escherichia coli. Xia, B., Ke, H., Inouye, M. Mol. Microbiol. (2001) [Pubmed]
  2. Cloning of two cold shock genes, cspA and cspG, from the deep-sea psychrophilic bacterium Shewanella violacea strain DSS12. Fujii, S., Nakasone, K., Horikoshi, K. FEMS Microbiol. Lett. (1999) [Pubmed]
  3. Identification and characterization of five cspA homologous genes from Myxococcus xanthus. Yamanaka, K., Inouye, M., Inouye, S. Biochim. Biophys. Acta (1999) [Pubmed]
  4. Crystal structure of CspA, the major cold shock protein of Escherichia coli. Schindelin, H., Jiang, W., Inouye, M., Heinemann, U. Proc. Natl. Acad. Sci. U.S.A. (1994) [Pubmed]
  5. The AGUAAA motif in cspA1/A2 mRNA is important for adaptation of Yersinia enterocolitica to grow at low temperature. Neuhaus, K., Anastasov, N., Kaberdin, V., Francis, K.P., Miller, V.L., Scherer, S. Mol. Microbiol. (2003) [Pubmed]
  6. Massive presence of the Escherichia coli 'major cold-shock protein' CspA under non-stress conditions. Brandi, A., Spurio, R., Gualerzi, C.O., Pon, C.L. EMBO J. (1999) [Pubmed]
  7. Trehalose synthesis is induced upon exposure of Escherichia coli to cold and is essential for viability at low temperatures. Kandror, O., DeLeon, A., Goldberg, A.L. Proc. Natl. Acad. Sci. U.S.A. (2002) [Pubmed]
  8. Protein folding and unfolding on a complex energy landscape. Leeson, D.T., Gai, F., Rodriguez, H.M., Gregoret, L.M., Dyer, R.B. Proc. Natl. Acad. Sci. U.S.A. (2000) [Pubmed]
  9. The Cold Box stem-loop proximal to the 5'-end of the Escherichia coli cspA gene stabilizes its mRNA at low temperature. Xia, B., Ke, H., Jiang, W., Inouye, M. J. Biol. Chem. (2002) [Pubmed]
  10. Tracking the evolution of the bacterial choline-binding domain: molecular characterization of the Clostridium acetobutylicum NCIB 8052 cspA gene. Sanchez-Beato, A.R., Ronda, C., Garcia, J.L. J. Bacteriol. (1995) [Pubmed]
  11. Global effects of homocysteine on transcription in Escherichia coli: induction of the gene for the major cold-shock protein, CspA. Fraser, K.R., Tuite, N.L., Bhagwat, A., O'Byrne, C.P. Microbiology (Reading, Engl.) (2006) [Pubmed]
  12. Loss of Expression of cspC, a Cold Shock Family Gene, Confers a Gain of Fitness in Escherichia coli K-12 Strains. Rath, D., Jawali, N. J. Bacteriol. (2006) [Pubmed]
  13. Role of the cold-box region in the 5' untranslated region of the cspA mRNA in its transient expression at low temperature in Escherichia coli. Fang, L., Hou, Y., Inouye, M. J. Bacteriol. (1998) [Pubmed]
  14. Identification of the promoter region of the Escherichia coli major cold shock gene, cspA. Tanabe, H., Goldstein, J., Yang, M., Inouye, M. J. Bacteriol. (1992) [Pubmed]
  15. Nonsense mutations in cspA cause ribosome trapping leading to complete growth inhibition and cell death at low temperature in Escherichia coli. Xia, B., Etchegaray, J.P., Inouye, M. J. Biol. Chem. (2001) [Pubmed]
  16. Molecular cloning, sequencing, and heterologous expression of the vaoA gene from Penicillium simplicissimum CBS 170.90 encoding vanillyl-alcohol oxidase. Benen, J.A., Sánchez-Torres, P., Wagemaker, M.J., Fraaije, M.W., van Berkel, W.J., Visser, J. J. Biol. Chem. (1998) [Pubmed]
  17. Preferential translation of cold-shock mRNAs during cold adaptation. Giuliodori, A.M., Brandi, A., Gualerzi, C.O., Pon, C.L. RNA (2004) [Pubmed]
  18. Conservation of the major cold shock protein in lactic acid bacteria. Kim, W.S., Khunajakr, N., Ren, J., Dunn, N.W. Curr. Microbiol. (1998) [Pubmed]
  19. The CspA family in Escherichia coli: multiple gene duplication for stress adaptation. Yamanaka, K., Fang, L., Inouye, M. Mol. Microbiol. (1998) [Pubmed]
  20. Characterization of cspB, a cold-shock-inducible gene from Lactococcus lactis, and evidence for a family of genes homologous to the Escherichia coli cspA major cold shock gene. Chapot-Chartier, M.P., Schouler, C., Lepeuple, A.S., Gripon, J.C., Chopin, M.C. J. Bacteriol. (1997) [Pubmed]
  21. Scale-up and optimization of the low-temperature inducible cspA promoter system. Vasina, J.A., Peterson, M.S., Baneyx, F. Biotechnol. Prog. (1998) [Pubmed]
  22. Gene expression regulation by the Curli activator CsgD protein: modulation of cellulose biosynthesis and control of negative determinants for microbial adhesion. Brombacher, E., Baratto, A., Dorel, C., Landini, P. J. Bacteriol. (2006) [Pubmed]
  23. Detection and speciation of bacteria through PCR using universal major cold-shock protein primer oligomers. Francis, K.P., Stewart, G.S. J. Ind. Microbiol. Biotechnol. (1997) [Pubmed]
  24. Overproduction, crystallization, and preliminary X-ray diffraction studies of the major cold shock protein from Bacillus subtilis, CspB. Schindelin, H., Herrler, M., Willimsky, G., Marahiel, M.A., Heinemann, U. Proteins (1992) [Pubmed]
  25. The backbone structure of the major cold-shock protein CS7.4 of Escherichia coli in solution includes extensive beta-sheet structure. Chatterjee, S., Jiang, W., Emerson, S.D., Inouye, M. J. Biochem. (1993) [Pubmed]
 
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