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Sbds  -  Shwachman-Bodian-Diamond syndrome homolog...

Mus musculus

Synonyms: 4733401P19Rik, AI836084, CGI-97, Protein 22A3, Ribosome maturation protein SBDS, ...
 
 
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Disease relevance of Sbds

  • However, both native and recombinant MHCK A displayed autophosphorylation activity following renaturation from SDS gels, and MHCK A expressed in Escherichia coli phosphorylated purified Dictyostelium myosin, confirming that MHCK A is a bona fide protein kinase [1].
  • In murine B lymphoma cells, SDS-unstable and -stable complexes were transported to the cell surface at almost similar rates, whereas after lysosomal relocalization or in a cell line in which MHC class II molecules normally accumulate in lysosomal compartments, stable complexes were preferentially addressed to the cell surface [2].
  • In contrast to the ACD responses, little differences were observed in the irritant contact dermatitis response of NEP(-/-) compared with NEP(+/+) animals after epicutaneous application of the skin irritants croton oil or SDS [3].
  • Analysis of solubilized immunoprecipitates by SDS-gel electrophoresis indicates that this cell surface molecule is not the 54,000 m.w. protein shared by teratocarcinoma and SV40-transformed cell lines [4].
  • A major portion of the nucleoprotein (amino acids 67 through 300) and the glycoprotein-2 of lymphocytic choriomeningitis (LCM) virus were synthesized by using recombinant technology and were injected together with SDS twice in portions of 5 micrograms into BALB/c mice [5].
 

Psychiatry related information on Sbds

 

High impact information on Sbds

  • None of the proteins secreted by Sertoli cells reacted specifically with H-Y antibodies, as determined with immunoprecipitation procedures and immunoabsorbent affinity chromatography, followed by SDS gel electrophoresis [7].
  • All four are polyadenylated and polysomal and can be translated in vitro to produce a 21,000 dalton protein co-migrating with purified dihydrofolate reductase on SDS polyacrylamide gels [8].
  • The expression of the leukocyte EL-246 antigen was regulated in the same manner as L-selectin and EL-246 recognized anti-L-selectin mAb affinity-purified antigen in SDS/PAGE Western blot analysis [9].
  • In extracts of eggs and midblastula stage embryos the antipeptide antibody recognized specifically a 120-kD glycoprotein that migrated faster on SDS gels than the 140-kD E- and N-cadherin polypeptides [10].
  • The alpha-adaptins, which are found exclusively in endocytic coated vesicles, separate into two bands on SDS gels, designated A and C (Robinson, M. S., 1987. J. Cell Biol. 104:887-895) [11].
 

Chemical compound and disease context of Sbds

 

Biological context of Sbds

  • Consistent with recessive disease inheritance for SDS, Sbds(+/-) mice have normal phenotypes, indistinguishable from those of their wild-type littermates [17].
  • Sbds is an essential gene for early mammalian development, with an expression pattern consistent with a critical role in cell proliferation [17].
  • SDS PAGE analysis of total cellular phosphoproteins (labeled by 2-h exposure to 32P-orthophosphate) from neurite-bearing primed PC12 cells revealed that Li+ reversibly inhibited the phosphorylation of a band of Mr 64,000 that was barely detectable in NGF-untreated PC12 cells [18].
  • Isolated fat tissue microvessels and lung, whose capillary endothelia express in situ specific binding sites for albumin, were homogenized and subjected to SDS-gel electrophoresis and electroblotting [19].
  • This molecule is structurally related to mouse L1 antigen according to NH2-terminal amino acid sequence (50% identity) as well as the behavior of its components in two-dimensional IEF/SDS PAGE gels [20].
 

Anatomical context of Sbds

  • To follow the biosynthesis of spectrin during differentiation, membranes and cytoskeletal proteins of cells metabolically labeled with [35S]methionine were solubilized by SDS and alpha and beta spectrins were recovered by specific immunoadsorption [21].
  • After labeling of both L929 cells and macrophages with immobilized LPO, all polypeptides in this molecular weight region were subjected to peptide mapping by simultaneous limited proteolysis and electrophoresis in a second SDS polyacrylamide slab gel [22].
  • By SDS gel electrophoresis and immunoblotting, high levels of p36 (60-120% of its relative abundance in fibroblasts) were found in small intestine, lung, and thymus, and intermediate levels (20-50%) were found in spleen, lymph nodes, and testes [23].
  • In contrast, the sialogalactoprotein profile of these cells, analyzed using an 125I-ricin/SDS polyacrylamide gel overlay technique, was similar to that of the parent cell line [24].
  • Intact erythrocytes (normal and parasite infected) incubated with 32Pi and isolated washed erythrocyte plasma membranes incubated with gamma-32P-ATP were analyzed for phosphoproteins by SDS PAGE and autoradiography [25].
 

Associations of Sbds with chemical compounds

  • Surface labeling of sperm with the galactose-oxidase-NaB[3H]4 technique, extraction with urea-detergent mixtures and affinity chromatography of extracts on gelatin-Sepharose revealed a single radioactive band of mot wt approximately 40,000 after SDS polyacrylamide gel electrophoresis and fluorography [26].
  • Myristate appears to be added to 43K protein cotranslationally and cannot be released from it by prolonged incubation in SDS, 2-mercaptoethanol, or hydroxylamine (pH 7.0 or 10.0), characteristics consistent with amino terminal myristoylation [27].
  • A glycoprotein, G4 antigen, isolated by mAb G4 from adult chick brain is described which comprises a major 135-kD component, a minor doublet at 190 kD, and diffusely migrating bands at 80 and 65 kD in SDS PAGE [20].
  • SDS polyacrylamide gel analysis shows the DOC-insoluble junctional ribbons to be characterized by major polypeptides at 37,000 and at 48,000, with minor bands at 34,000, 41,000, 71,000, 86,000, 92,000, and 102,000 [28].
  • Glycerol gradient centrifugation, SDS gel electrophoresis and immunoblots identified TTL as a monomeric protein with an apparent polypeptide molecular weight of about 40,000 [29].
 

Analytical, diagnostic and therapeutic context of Sbds

  • Separation by SDS PAGE followed by immunoblotting revealed only one immunochemically stainable protein band with Mr approximately 48 Kdaltons in extracts from tissues showing immunoreactivity [30].
  • Immunoprecipitation of radiolabeled islet cell lysates followed by SDS polyacrylamide gel electrophoresis and autoradiography suggested that the R4A antiserum recognized a Mr 40,000 glycoprotein [31].
  • Isoelectric focusing/SDS PAGE of [35S]methionine-labeled cell extracts revealed that the phosphorylated isoform of beta-tubulin, termed beta 2, is one of three isoforms detected in differentiated N115 cells, and is diminished in amounts in the undifferentiated cells [32].
  • Subsequent analysis of this purified preparation by SDS PAGE, followed by silver staining, reveals approximately 7 polypeptides with Mr between 14,000 and 20,000 [33].
  • (ii) The junctions are progressively solubilised by increasing concentrations of SDS (in the range 0.1-0.5%) and the dissolution of the junctional structure, observed by electron microscopy, parallels the release of the 16 K protein [34].

References

  1. Structural analysis of myosin heavy chain kinase A from Dictyostelium. Evidence for a highly divergent protein kinase domain, an amino-terminal coiled-coil domain, and a domain homologous to the beta-subunit of heterotrimeric G proteins. Futey, L.M., Medley, Q.G., Côté, G.P., Egelhoff, T.T. J. Biol. Chem. (1995) [Pubmed]
  2. MHC class II transport from lysosomal compartments to the cell surface is determined by stable peptide binding, but not by the cytosolic domains of the alpha- and beta-chains. Théry, C., Brachet, V., Regnault, A., Rescigno, M., Ricciardi-Castagnoli, P., Bonnerot, C., Amigorena, S. J. Immunol. (1998) [Pubmed]
  3. Neutral endopeptidase terminates substance P-induced inflammation in allergic contact dermatitis. Scholzen, T.E., Steinhoff, M., Bonaccorsi, P., Klein, R., Amadesi, S., Geppetti, P., Lu, B., Gerard, N.P., Olerud, J.E., Luger, T.A., Bunnett, N.W., Grady, E.F., Armstrong, C.A., Ansel, J.C. J. Immunol. (2001) [Pubmed]
  4. A murine stage-specific embryonic antigen (SSEA-2) is expressed on some murine SV40-transformed cells. Shevinsky, L.H., Knowles, B.B., Howe, C., Aden, D.P., Solter, D. J. Immunol. (1981) [Pubmed]
  5. CD8+ T lymphocyte-mediated antiviral immunity in mice as a result of injection of recombinant viral proteins. Weidt, G., Utermöhlen, O., Zerrahn, J., Reimann, J., Deppert, W., Lehmann-Grube, F. J. Immunol. (1994) [Pubmed]
  6. Alzheimer's disease: a monoclonal antibody raised against paired helical filaments. Brückner, M., Bendix, U., Hube, M., Arendt, T., Bigl, V. Acta Histochem. Suppl. (1991) [Pubmed]
  7. The absence of specific interactions of Sertoli-cell-secreted proteins with antibodies directed against H-Y antigen. Gore-Langton, R.E., Tung, P.S., Fritz, I.B. Cell (1983) [Pubmed]
  8. Size heterogeneity in the 3' end of dihydrofolate reductase messenger RNAs in mouse cells. Setzer, D.R., McGrogan, M., Nunberg, J.H., Schimke, R.T. Cell (1980) [Pubmed]
  9. Characterization of a functionally important and evolutionarily well-conserved epitope mapped to the short consensus repeats of E-selectin and L-selectin. Jutila, M.A., Watts, G., Walcheck, B., Kansas, G.S. J. Exp. Med. (1992) [Pubmed]
  10. A cadherin-like protein in eggs and cleaving embryos of Xenopus laevis is expressed in oocytes in response to progesterone. Choi, Y.S., Sehgal, R., McCrea, P., Gumbiner, B. J. Cell Biol. (1990) [Pubmed]
  11. Cloning of cDNAs encoding two related 100-kD coated vesicle proteins (alpha-adaptins). Robinson, M.S. J. Cell Biol. (1989) [Pubmed]
  12. Changes in protein kinase C epsilon phosphorylation status and intracellular localization as 3T3 and 3T6 fibroblasts grow to confluency and quiescence: a role for phosphorylation at ser-729? England, K., Rumsby, M.G. Biochem. J. (2000) [Pubmed]
  13. Murine cytomegalovirus-induced protein synthesis. Moon, H.M., Sapienza, V.J., Carp, R.I., Kim, K.S. J. Gen. Virol. (1979) [Pubmed]
  14. The neutralization site on the E2 glycoprotein of Venezuelan equine encephalomyelitis (TC-83) virus is composed of multiple conformationally stable epitopes. Roehrig, J.T., Mathews, J.H. Virology (1985) [Pubmed]
  15. Investigation of the structure of lipid A from Actinobacillus actinomycetemcomitans strain Y4 and human clinical isolate PO 1021-7. Masoud, H., Weintraub, S.T., Wang, R., Cotter, R., Holt, S.C. Eur. J. Biochem. (1991) [Pubmed]
  16. The expression of MHC class II (Ia) antigens on mouse keratinocytes following epicutaneous application of contact sensitizers and irritants. Stringer, C.P., Hicks, R., Botham, P.A. Br. J. Dermatol. (1991) [Pubmed]
  17. Loss of the mouse ortholog of the shwachman-diamond syndrome gene (Sbds) results in early embryonic lethality. Zhang, S., Shi, M., Hui, C.C., Rommens, J.M. Mol. Cell. Biol. (2006) [Pubmed]
  18. Lithium ion inhibits nerve growth factor-induced neurite outgrowth and phosphorylation of nerve growth factor-modulated microtubule-associated proteins. Burstein, D.E., Seeley, P.J., Greene, L.A. J. Cell Biol. (1985) [Pubmed]
  19. Identification of albumin-binding proteins in capillary endothelial cells. Ghinea, N., Fixman, A., Alexandru, D., Popov, D., Hasu, M., Ghitescu, L., Eskenasy, M., Simionescu, M., Simionescu, N. J. Cell Biol. (1988) [Pubmed]
  20. Membrane glycoproteins involved in neurite fasciculation. Rathjen, F.G., Wolff, J.M., Frank, R., Bonhoeffer, F., Rutishauser, U. J. Cell Biol. (1987) [Pubmed]
  21. Unequal synthesis and differential degradation of alpha and beta spectrin during murine erythroid differentiation. Lehnert, M.E., Lodish, H.F. J. Cell Biol. (1988) [Pubmed]
  22. Identification of cytoskeletal components involved in attachment of L929 cells and macrophages to polystyrene. Lanks, K.W., Chin, N.W. J. Cell Biol. (1981) [Pubmed]
  23. The 46,000-dalton tyrosine protein kinase substrate is widespread, whereas the 36,000-dalton substrate is only expressed at high levels in certain rodent tissues. Gould, K.L., Cooper, J.A., Hunter, T. J. Cell Biol. (1984) [Pubmed]
  24. Variants of BALB/c 3T3 cells lacking complex gangliosides retain a fibronectin matrix and spread normally on fibronectin-coated substrates. Griffiths, S.L., Perkins, R.M., Streuli, C.H., Critchley, D.R. J. Cell Biol. (1986) [Pubmed]
  25. Membrane-associated phosphoproteins in Plasmodium berghei-infected murine erythrocytes. Wiser, M.F., Wood, P.A., Eaton, J.W., Sheppard, J.R. J. Cell Biol. (1983) [Pubmed]
  26. A collagen-binding protein on the surface of ejaculated rabbit spermatozoa. Koehler, J.K., Nudelman, E.D., Hakomori, S. J. Cell Biol. (1980) [Pubmed]
  27. Acetylcholine receptor-associated 43K protein contains covalently bound myristate. Musil, L.S., Carr, C., Cohen, J.B., Merlie, J.P. J. Cell Biol. (1988) [Pubmed]
  28. Zonulae occludentes in junctional complex-enriched fractions from mouse liver: preliminary morphological and biochemical characterization. Stevenson, B.R., Goodenough, D.A. J. Cell Biol. (1984) [Pubmed]
  29. Purification of brain tubulin-tyrosine ligase by biochemical and immunological methods. Schröder, H.C., Wehland, J., Weber, K. J. Cell Biol. (1985) [Pubmed]
  30. Distribution of urokinase-type plasminogen activator immunoreactivity in the mouse. Larsson, L.I., Skriver, L., Nielsen, L.S., Grøndahl-Hansen, J., Kristensen, P., Danø, K. J. Cell Biol. (1984) [Pubmed]
  31. Specific pancreatic beta-cell surface antigens recognized by a xenogenic antiserum. Dyrberg, T., Baekkeskov, S., Lernmark, A. J. Cell Biol. (1982) [Pubmed]
  32. A polymer-dependent increase in phosphorylation of beta-tubulin accompanies differentiation of a mouse neuroblastoma cell line. Gard, D.L., Kirschner, M.W. J. Cell Biol. (1985) [Pubmed]
  33. Mitogenic polypeptide of the mammalian seminiferous epithelium: biochemical characterization and partial purification. Feig, L.A., Klagsbrun, M., Bellvé, A.R. J. Cell Biol. (1983) [Pubmed]
  34. Analysis of vertebrate gap junction protein. Finbow, M.E., Shuttleworth, J., Hamilton, A.E., Pitts, J.D. EMBO J. (1983) [Pubmed]
 
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