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Chemical Compound Review

Hydrogen     molecular hydrogen

Synonyms: Hydronium, Dihydrogen, Hydrogen gas, AGN-PC-0CLUKI, CHEBI:18276, ...
 
 
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Disease relevance of Hydrogen

 

High impact information on Hydrogen

 

Chemical compound and disease context of Hydrogen

 

Biological context of Hydrogen

  • Hydrogenation of the more sterically hindered members of the series furnished free aniline and the previously reported iron dihydrogen complex [16].
  • Dihydrogen activation by a diruthenium analogue of the Fe-only hydrogenase active site [17].
  • CONCLUSIONS: Hydrogen peroxide gas plasma sterilization may provide a cost-effective means of sterilizing nonlumen electrophysiology catheters without the problem of potentially harmful chemical residuals [18].
  • Sequence Dependence of BNIP3 Transmembrane Domain Dimerization Implicates Side-chain Hydrogen Bonding and a Tandem GxxxG Motif in Specific Helix-Helix Interactions [19].
  • A systematic investigation of molecular structures/supramolecular organization relationships in dihydrogen-bonded complexes comprising NaBH4 and poly-2-hydroxyethyl-cyclen (poly-HEC) building blocks is reported [20].
 

Anatomical context of Hydrogen

  • Structural basis of human erythrocyte glucose transporter function in reconstituted system. Hydrogen exchange [21].
  • To confirm the inhibitory effect of bisphosphonates on osteoclast formation and gain some insights into the underlying mechanisms, we examined the effect of disodium dihydrogen (cycloheptylamino)-methylene-bisphosphonate monohydrate (YM175) on osteoclast-like multinucleated cell (OCL) formation in various mouse coculture systems [22].
  • RESULTS: Hydrogen peroxide caused a reversible rise in [Ca2+]i of vascular smooth muscle under both resting conditions and in the precontracted state [23].
  • BACKGROUND: Hydrogen peroxide (H2O2) is an important mediator of glomerular injury, which induces proliferation and cell contraction in mesangial cells [24].
  • OBJECTIVE: Hydrogen peroxide (H(2)O(2)) produced by the vascular endothelium is a signaling molecule regulating vascular tone [25].
 

Associations of Hydrogen with other chemical compounds

  • The Role of a Conserved Serine Residue within Hydrogen Bonding Distance of FAD in Redox Properties and the Modulation of Catalysis by Ca2+/Calmodulin of Constitutive Nitric-oxide Synthases [26].
  • Mechanistic insights into the phosphine-free RuCp*-diamine-catalyzed hydrogenation of aryl ketones: experimental and theoretical evidence for an alcohol-mediated dihydrogen activation [27].
  • Single-crystal neutron diffraction, inelastic neutron scattering, and density functional calculations provide experimental and theoretical analyses of the nature of the osmium-bound, "elongated" dihydrogen ligands in [Cp*OsH(4)(L)][BF(4)] complexes (L = PPh(3), AsPh(3), or PCy(3)) [28].
  • Geometry of Hydrogen Bonds Formed by Lipid Bilayer Nitroxide Probes: A High-Frequency Pulsed ENDOR/EPR Study [29].
  • Exposure of the zirconium hydrides containing the eta5,eta3-4,5-dihydroindenediyl rings to 1 atm of dihydrogen afforded the tetrahydroindenyl zirconium dihydride complexes, establishing the intermediacy of this unusual coordination environment during benzo ring hydrogenation [30].
 

Gene context of Hydrogen

  • RESULTS: Hydrogen peroxide exposure led to mobilization of annexin VI from lipid rafts to the cytosol, which was followed by an increase in cytosolic calcium, phosphorylation of CaMK II, and formation of focal adhesion-like complexes [31].
  • The catalytic mechanism of carbonic anhydrase. Hydrogen-isotope effects on the kinetic parameters of the human C isoenzyme [32].
  • Activation of Ubiquitin Ligase SCF(Skp2) by Cks1: Insights from Hydrogen Exchange Mass Spectrometry [33].
  • The reaction of a [(PHOX)Ir(COD)](+) complex (COD = 1,5-cyclooctadiene) with dihydrogen was studied by NMR spectroscopy (PHOX = chiral phosphinooxazoline ligand) [34].
  • PAS Domain Allostery and Light-induced Conformational Changes in Photoactive Yellow Protein upon I(2) Intermediate Formation, Probed with Enhanced Hydrogen/Deuterium Exchange Mass Spectrometry [35].
 

Analytical, diagnostic and therapeutic context of Hydrogen

References

  1. Hydrogen peroxide, potassium currents, and membrane potential in human endothelial cells. Bychkov, R., Pieper, K., Ried, C., Milosheva, M., Bychkov, E., Luft, F.C., Haller, H. Circulation (1999) [Pubmed]
  2. Characterization of Mutants That Change the Hydrogen Bonding of the Semiquinone Radical at the QH Site of the Cytochrome bo3 from Escherichia coli. Yap, L.L., Samoilova, R.I., Gennis, R.B., Dikanov, S.A. J. Biol. Chem. (2007) [Pubmed]
  3. Protein-Cofactor Interactions in Bacterial Reaction Centers from Rhodobacter sphaeroides R-26: II. Geometry of the Hydrogen Bonds to the Primary Quinone Formula by 1H and 2H ENDOR Spectroscopy. Flores, M., Isaacson, R., Abresch, E., Calvo, R., Lubitz, W., Feher, G. Biophys. J. (2007) [Pubmed]
  4. Plasma hydrogen peroxide production in hypertensives and normotensive subjects at genetic risk of hypertension. Lacy, F., O'Connor, D.T., Schmid-Schönbein, G.W. J. Hypertens. (1998) [Pubmed]
  5. The mechanism of toxicity of 5-S-cysteinyldopa to tumour cells. Hydrogen peroxide as a mediator of cytotoxicity. Ito, S., Inoue, S., Fujita, K. Biochem. Pharmacol. (1983) [Pubmed]
  6. Extracellular cytolysis by activated macrophages and granulocytes. II. Hydrogen peroxide as a mediator of cytotoxicity. Nathan, C.F., Silverstein, S.C., Brukner, L.H., Cohn, Z.A. J. Exp. Med. (1979) [Pubmed]
  7. Absence of stable intermediates on the folding pathway of barnase. Takei, J., Chu, R.A., Bai, Y. Proc. Natl. Acad. Sci. U.S.A. (2000) [Pubmed]
  8. Hydrogen peroxide induces intracellular calcium oscillations in human aortic endothelial cells. Hu, Q., Corda, S., Zweier, J.L., Capogrossi, M.C., Ziegelstein, R.C. Circulation (1998) [Pubmed]
  9. Specific Aquaporins Facilitate the Diffusion of Hydrogen Peroxide across Membranes. Bienert, G.P., M??ller, A.L., Kristiansen, K.A., Schulz, A., M??ller, I.M., Schjoerring, J.K., Jahn, T.P. J. Biol. Chem. (2007) [Pubmed]
  10. Mapping ERK2-MKP3 Binding Interfaces by Hydrogen/Deuterium Exchange Mass Spectrometry. Zhou, B., Zhang, J., Liu, S., Reddy, S., Wang, F., Zhang, Z.Y. J. Biol. Chem. (2006) [Pubmed]
  11. Neisseria gonorrhoeae DNA Recombination and Repair Enzymes Protect against Oxidative Damage Caused by Hydrogen Peroxide. Stohl, E.A., Seifert, H.S. J. Bacteriol. (2006) [Pubmed]
  12. Inhibition by a new bisphosphonate (YM175) of bone resorption induced by the MBT-2 tumour of mice. Nemoto, R., Nishijima, Y., Uchida, K., Koiso, K. Br. J. Cancer (1993) [Pubmed]
  13. Local Stability of Rhodobacter capsulatus Cytochrome c(2) Probed by Solution Phase Hydrogen/Deuterium Exchange and Mass Spectrometry. Cheng, G., Wysocki, V.H., Cusanovich, M.A. J. Am. Soc. Mass Spectrom. (2006) [Pubmed]
  14. Purification and characterization of two forms of hydrogenase isoenzyme 1 from Escherichia coli. Francis, K., Patel, P., Wendt, J.C., Shanmugam, K.T. J. Bacteriol. (1990) [Pubmed]
  15. HIV-1 and HIV-2 reverse transcriptases: a comparative study of sensitivity to inhibition by selected natural products. Tan, G.T., Miller, J.F., Kinghorn, A.D., Hughes, S.H., Pezzuto, J.M. Biochem. Biophys. Res. Commun. (1992) [Pubmed]
  16. Synthesis and Hydrogenation of Bis(imino)pyridine Iron Imides. Bart, S.C., Lobkovsky, E., Bill, E., Chirik, P.J. J. Am. Chem. Soc. (2006) [Pubmed]
  17. Dihydrogen activation by a diruthenium analogue of the Fe-only hydrogenase active site. Justice, A.K., Linck, R.C., Rauchfuss, T.B., Wilson, S.R. J. Am. Chem. Soc. (2004) [Pubmed]
  18. Safety and efficacy of hydrogen peroxide plasma sterilization for repeated use of electrophysiology catheters. Bathina, M.N., Mickelsen, S., Brooks, C., Jaramillo, J., Hepton, T., Kusumoto, F.M. J. Am. Coll. Cardiol. (1998) [Pubmed]
  19. Sequence Dependence of BNIP3 Transmembrane Domain Dimerization Implicates Side-chain Hydrogen Bonding and a Tandem GxxxG Motif in Specific Helix-Helix Interactions. Sulistijo, E.S., Mackenzie, K.R. J. Mol. Biol. (2006) [Pubmed]
  20. Supramolecular synthesis through dihydrogen bonds: self-assembly of controlled architectures from NaBH4 x poly(2-hydroxyethyl)cyclen building blocks. Custelcean, R., Vlassa, M., Jackson, J.E. Chemistry (Weinheim an der Bergstrasse, Germany) (2002) [Pubmed]
  21. Structural basis of human erythrocyte glucose transporter function in reconstituted system. Hydrogen exchange. Jung, E.K., Chin, J.J., Jung, C.Y. J. Biol. Chem. (1986) [Pubmed]
  22. A third-generation bisphosphonate, YM175, inhibits osteoclast formation in murine cocultures by inhibiting proliferation of precursor cells via supporting cell-dependent mechanisms. Nishikawa, M., Yamamoto, M., Murakami, T., Akatsu, T., Kugai, N., Nagata, N. J. Bone Miner. Res. (1998) [Pubmed]
  23. Decrease in Ca2+ sensitivity as a mechanism of hydrogen peroxide-induced relaxation of rabbit aorta. Iesaki, T., Okada, T., Shimada, I., Yamaguchi, H., Ochi, R. Cardiovasc. Res. (1996) [Pubmed]
  24. Hydrogen peroxide activates ion currents in rat mesangial cells. Gloy, J., Fischer, K.G., Meyer, T.N., Schollmeyer, P., Greger, R., Pavenstädt, H. Kidney Int. (1999) [Pubmed]
  25. Endothelial nitric oxide synthase activation leads to dilatory H(2)O(2) production in mouse cerebral arteries. Drouin, A., Thorin-Trescases, N., Hamel, E., Falck, J.R., Thorin, E. Cardiovasc. Res. (2007) [Pubmed]
  26. The Role of a Conserved Serine Residue within Hydrogen Bonding Distance of FAD in Redox Properties and the Modulation of Catalysis by Ca2+/Calmodulin of Constitutive Nitric-oxide Synthases. Panda, S.P., Gao, Y.T., Roman, L.J., Mart??sek, P., Salerno, J.C., Masters, B.S. J. Biol. Chem. (2006) [Pubmed]
  27. Mechanistic insights into the phosphine-free RuCp*-diamine-catalyzed hydrogenation of aryl ketones: experimental and theoretical evidence for an alcohol-mediated dihydrogen activation. Hedberg, C., Källström, K., Arvidsson, P.I., Brandt, P., Andersson, P.G. J. Am. Chem. Soc. (2005) [Pubmed]
  28. Electronic and steric effects on molecular dihydrogen activation in [CpOsH4(L)]+ (L = PPh3, AsPh3, and PCy3). Webster, C.E., Gross, C.L., Young, D.M., Girolami, G.S., Schultz, A.J., Hall, M.B., Eckert, J. J. Am. Chem. Soc. (2005) [Pubmed]
  29. Geometry of Hydrogen Bonds Formed by Lipid Bilayer Nitroxide Probes: A High-Frequency Pulsed ENDOR/EPR Study. Smirnova, T.I., Smirnov, A.I., Paschenko, S.V., Poluektov, O.G. J. Am. Chem. Soc. (2007) [Pubmed]
  30. Synthesis of bis(indenyl)zirconium dihydrides and subsequent rearrangement to eta5,eta3-4,5-dihydroindenediyl ligands: evidence for intermediates during the hydrogenation to tetrahydroindenyl derivatives. Bradley, C.A., Lobkovsky, E., Keresztes, I., Chirik, P.J. J. Am. Chem. Soc. (2006) [Pubmed]
  31. Oxidative-induced calcium mobilization is dependent on annexin VI release from lipid rafts. Cuschieri, J., Bulger, E., Garcia, I., Maier, R.V. Surgery (2005) [Pubmed]
  32. The catalytic mechanism of carbonic anhydrase. Hydrogen-isotope effects on the kinetic parameters of the human C isoenzyme. Steiner, H., Jonsson, B.H., Lindskog, S. Eur. J. Biochem. (1975) [Pubmed]
  33. Activation of Ubiquitin Ligase SCF(Skp2) by Cks1: Insights from Hydrogen Exchange Mass Spectrometry. Yao, Z.P., Zhou, M., Kelly, S.E., Seeliger, M.A., Robinson, C.V., Itzhaki, L.S. J. Mol. Biol. (2006) [Pubmed]
  34. A combined experimental and computational study of dihydrido(phosphinooxazoline)iridium complexes. Mazet, C., Smidt, S.P., Meuwly, M., Pfaltz, A. J. Am. Chem. Soc. (2004) [Pubmed]
  35. PAS Domain Allostery and Light-induced Conformational Changes in Photoactive Yellow Protein upon I(2) Intermediate Formation, Probed with Enhanced Hydrogen/Deuterium Exchange Mass Spectrometry. Brudler, R., Gessner, C.R., Li, S., Tyndall, S., Getzoff, E.D., Woods, V.L. J. Mol. Biol. (2006) [Pubmed]
  36. Effect of weak interactions on the H...H distance in stretched dihydrogen complexes. Gusev, D.G. J. Am. Chem. Soc. (2004) [Pubmed]
  37. Molecular topology and quantum chemical descriptors in the study of reversed-phase liquid chromatography. Hydrogen-bonding behavior of chalcones and flavanones. Luco, J.M., Yamin, L.J., Ferretti, H.F. Journal of pharmaceutical sciences. (1995) [Pubmed]
  38. Effects of intravenous ketamine on gastrointestinal motility in the dog. Fass, J., Bares, R., Hermsdorf, V., Schumpelick, V. Intensive care medicine. (1995) [Pubmed]
  39. Mechanism of vascular smooth muscle cells activation by hydrogen peroxide: role of phospholipase C gamma. González-Pacheco, F.R., Caramelo, C., Castilla, M.A., Deudero, J.J., Arias, J., Yagüe, S., Jiménez, S., Bragado, R., Alvarez-Arroyo, M.V. Nephrol. Dial. Transplant. (2002) [Pubmed]
  40. Hydrogen peroxide-enhanced transanal ultrasound in the assessment of fistula-in-ano. Poen, A.C., Felt-Bersma, R.J., Eijsbouts, Q.A., Cuesta, M.A., Meuwissen, S.G. Dis. Colon Rectum (1998) [Pubmed]
 
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